data_8A1Y
#
_model_server_result.job_id            -ibdxLRSTVhu4ZxhYwJonQ 
_model_server_result.datetime_utc      '2024-11-23 04:41:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8a1y 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":605}' 
#
_entry.id    8A1Y 
#
_exptl.entry_id    8A1Y 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              510.615 
_entity.id                          10 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DODECYL-BETA-D-MALTOSIDE 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8A1Y 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8A1Y 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 10 J N N 
? 10 L N N 
? 10 Q N N 
? 10 R N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 B OG1 THR 236 B THR 236 1_555 G P FMN . B FMN 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.599 ? 
covale ? covale2 C OG1 THR 225 C THR 225 1_555 O P FMN . C FMN 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.604 ? 
metalc ? metalc1 D SG CYS 29 D CYS 29 1_555 P FE2 FES . D FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? 
metalc ? metalc2 D SG CYS 112 D CYS 112 1_555 P FE1 FES . D FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? 
metalc ? metalc3 P FE1 FES . D FES 1001 1_555 E SG CYS 26 E CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? 
metalc ? metalc4 P FE2 FES . D FES 1001 1_555 E SG CYS 120 E CYS 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? 
metalc ? metalc5 F SG CYS 70 F CYS 70 1_555 T FE1 FES . F FES 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? 
metalc ? metalc6 F SG CYS 76 F CYS 76 1_555 T FE1 FES . F FES 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? 
metalc ? metalc7 F SG CYS 79 F CYS 79 1_555 T FE2 FES . F FES 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? 
metalc ? metalc8 F SG CYS 111 F CYS 111 1_555 T FE2 FES . F FES 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? 
#
_chem_comp.formula           'C24 H46 O11' 
_chem_comp.formula_weight    510.615 
_chem_comp.id                LMT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DODECYL-BETA-D-MALTOSIDE 
_chem_comp.type              d-saccharide 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1B C2B LMT sing 514 n n 
C1B O1B LMT sing 515 n n 
C1B O5B LMT sing 516 n n 
C1B H1B LMT sing 517 n n 
C2B C3B LMT sing 518 n n 
C2B O2B LMT sing 519 n n 
C2B H2B LMT sing 520 n n 
C3B C4B LMT sing 521 n n 
C3B O3B LMT sing 522 n n 
C3B H3B LMT sing 523 n n 
C4B C5B LMT sing 524 n n 
C4B O4' LMT sing 525 n n 
C4B H4B LMT sing 526 n n 
C5B C6B LMT sing 527 n n 
C5B O5B LMT sing 528 n n 
C5B H5B LMT sing 529 n n 
C6B O6B LMT sing 530 n n 
C6B "H6'2" LMT sing 531 n n 
C6B "H6'1" LMT sing 532 n n 
O1B C4' LMT sing 533 n n 
O2B H2O1 LMT sing 534 n n 
O3B H3O1 LMT sing 535 n n 
O4' H4O1 LMT sing 536 n n 
O6B H6B LMT sing 537 n n 
C1' C2' LMT sing 538 n n 
C1' O1' LMT sing 539 n n 
C1' O5' LMT sing 540 n n 
C1' H1' LMT sing 541 n n 
C2' C3' LMT sing 542 n n 
C2' O2' LMT sing 543 n n 
C2' H2' LMT sing 544 n n 
C3' C4' LMT sing 545 n n 
C3' O3' LMT sing 546 n n 
C3' H3' LMT sing 547 n n 
C4' C5' LMT sing 548 n n 
C4' H4' LMT sing 549 n n 
C5' C6' LMT sing 550 n n 
C5' O5' LMT sing 551 n n 
C5' H5' LMT sing 552 n n 
C6' O6' LMT sing 553 n n 
C6' H6D LMT sing 554 n n 
C6' H6E LMT sing 555 n n 
O1' C1 LMT sing 556 n n 
O2' H2O2 LMT sing 557 n n 
O3' H3O2 LMT sing 558 n n 
O6' H6' LMT sing 559 n n 
C1 C2 LMT sing 560 n n 
C1 H12 LMT sing 561 n n 
C1 H11 LMT sing 562 n n 
C2 C3 LMT sing 563 n n 
C2 H22 LMT sing 564 n n 
C2 H21 LMT sing 565 n n 
C3 C4 LMT sing 566 n n 
C3 H32 LMT sing 567 n n 
C3 H31 LMT sing 568 n n 
C4 C5 LMT sing 569 n n 
C4 H42 LMT sing 570 n n 
C4 H41 LMT sing 571 n n 
C5 C6 LMT sing 572 n n 
C5 H52 LMT sing 573 n n 
C5 H51 LMT sing 574 n n 
C6 C7 LMT sing 575 n n 
C6 H62 LMT sing 576 n n 
C6 H61 LMT sing 577 n n 
C7 C8 LMT sing 578 n n 
C7 H72 LMT sing 579 n n 
C7 H71 LMT sing 580 n n 
C8 C9 LMT sing 581 n n 
C8 H82 LMT sing 582 n n 
C8 H81 LMT sing 583 n n 
C9 C10 LMT sing 584 n n 
C9 H92 LMT sing 585 n n 
C9 H91 LMT sing 586 n n 
C10 C11 LMT sing 587 n n 
C10 H102 LMT sing 588 n n 
C10 H101 LMT sing 589 n n 
C11 C12 LMT sing 590 n n 
C11 H112 LMT sing 591 n n 
C11 H111 LMT sing 592 n n 
C12 H123 LMT sing 593 n n 
C12 H122 LMT sing 594 n n 
C12 H121 LMT sing 595 n n 
#
_atom_sites.entry_id                     8A1Y 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 7 FMN B 1 600 600 FMN FMN . 
H 8 RBF B 1 601 601 RBF RBF . 
I 9 3PE B 1 602 602 3PE 3PE . 
J 10 LMT B 1 603 603 LMT LMT . 
K 9 3PE B 1 604 604 3PE 3PE . 
L 10 LMT B 1 605 605 LMT LMT . 
M 9 3PE B 1 606 606 3PE 3PE . 
N 11 HQO B 1 607 607 HQO HQO . 
O 7 FMN C 1 1000 1000 FMN FMN . 
P 12 FES D 1 1001 1001 FES FES . 
Q 10 LMT D 1 1002 1002 LMT LMT . 
R 10 LMT E 1 201 201 LMT LMT . 
S 13 FAD F 1 1501 1501 FAD FAD . 
T 12 FES F 1 1502 1502 FES FES . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1B LMT . . . L 10 142.8 119.964 163.325 1 115.95 ? C1B LMT 605 B 1 
HETATM 2 C C2B LMT . . . L 10 141.93 121.23 163.215 1 115.93 ? C2B LMT 605 B 1 
HETATM 3 C C3B LMT . . . L 10 142.778 122.5 163.407 1 112.32 ? C3B LMT 605 B 1 
HETATM 4 C C4B LMT . . . L 10 144.26 122.219 163.075 1 114.99 ? C4B LMT 605 B 1 
HETATM 5 C C5B LMT . . . L 10 144.294 121.178 161.947 1 115.25 ? C5B LMT 605 B 1 
HETATM 6 C C6B LMT . . . L 10 145.723 121.032 161.441 1 114.58 ? C6B LMT 605 B 1 
HETATM 7 O O1B LMT . . . L 10 141.979 118.842 163.25 1 116.18 ? O1B LMT 605 B 1 
HETATM 8 O O2B LMT . . . L 10 141.358 121.219 161.971 1 116.67 ? O2B LMT 605 B 1 
HETATM 9 O O3B LMT . . . L 10 142.613 123.031 164.659 1 111.19 ? O3B LMT 605 B 1 
HETATM 10 O O4' LMT . . . L 10 144.886 123.366 162.649 1 112.17 ? O4' LMT 605 B 1 
HETATM 11 O O5B LMT . . . L 10 143.785 119.922 162.335 1 116.28 ? O5B LMT 605 B 1 
HETATM 12 O O6B LMT . . . L 10 146.355 122.248 161.463 1 112.24 ? O6B LMT 605 B 1 
HETATM 13 C C1' LMT . . . L 10 141.048 115.832 160.58 1 115.11 ? C1' LMT 605 B 1 
HETATM 14 C C2' LMT . . . L 10 142.439 116.465 160.381 1 114.68 ? C2' LMT 605 B 1 
HETATM 15 C C3' LMT . . . L 10 142.837 117.359 161.586 1 111.47 ? C3' LMT 605 B 1 
HETATM 16 C C4' LMT . . . L 10 141.693 118.305 161.979 1 110.59 ? C4' LMT 605 B 1 
HETATM 17 C C5' LMT . . . L 10 140.454 117.403 162.13 1 109.24 ? C5' LMT 605 B 1 
HETATM 18 C C6' LMT . . . L 10 139.253 118.09 162.718 1 106.1 ? C6' LMT 605 B 1 
HETATM 19 O O1' LMT . . . L 10 140.62 115.266 159.417 1 110.21 ? O1' LMT 605 B 1 
HETATM 20 O O2' LMT . . . L 10 143.354 115.449 160.276 1 115.62 ? O2' LMT 605 B 1 
HETATM 21 O O3' LMT . . . L 10 143.952 118.085 161.295 1 107.08 ? O3' LMT 605 B 1 
HETATM 22 O O5' LMT . . . L 10 140.113 116.844 160.897 1 108.86 ? O5' LMT 605 B 1 
HETATM 23 O O6' LMT . . . L 10 138.327 117.105 162.931 1 101.44 ? O6' LMT 605 B 1 
HETATM 24 C C1 LMT . . . L 10 139.297 114.79 159.452 1 106.93 ? C1 LMT 605 B 1 
HETATM 25 C C2 LMT . . . L 10 139.28 113.653 158.477 1 110.25 ? C2 LMT 605 B 1 
HETATM 26 C C3 LMT . . . L 10 137.965 113.342 157.844 1 113.29 ? C3 LMT 605 B 1 
HETATM 27 C C4 LMT . . . L 10 137.147 112.575 158.847 1 113.86 ? C4 LMT 605 B 1 
HETATM 28 C C5 LMT . . . L 10 135.743 112.44 158.366 1 113.26 ? C5 LMT 605 B 1 
HETATM 29 C C6 LMT . . . L 10 135.042 111.285 158.997 1 111.03 ? C6 LMT 605 B 1 
HETATM 30 C C7 LMT . . . L 10 133.595 111.617 159.213 1 111.77 ? C7 LMT 605 B 1 
HETATM 31 C C8 LMT . . . L 10 132.941 111.837 157.893 1 114.07 ? C8 LMT 605 B 1 
HETATM 32 C C9 LMT . . . L 10 131.45 111.744 157.921 1 113.29 ? C9 LMT 605 B 1 
HETATM 33 C C10 LMT . . . L 10 130.931 113.02 158.522 1 110.47 ? C10 LMT 605 B 1 
HETATM 34 C C11 LMT . . . L 10 129.45 112.974 158.716 1 111.09 ? C11 LMT 605 B 1 
HETATM 35 C C12 LMT . . . L 10 128.721 113.094 157.421 1 109.39 ? C12 LMT 605 B 1 
HETATM 36 H H1B LMT . . . L 10 143.288 120.026 164.161 1 109.95 ? H1B LMT 605 B 1 
HETATM 37 H H2B LMT . . . L 10 141.294 121.2 163.947 1 109.75 ? H2B LMT 605 B 1 
HETATM 38 H H3B LMT . . . L 10 142.445 123.146 162.764 1 108.72 ? H3B LMT 605 B 1 
HETATM 39 H H4B LMT . . . L 10 144.684 121.82 163.851 1 110.21 ? H4B LMT 605 B 1 
HETATM 40 H H5B LMT . . . L 10 143.764 121.521 161.21 1 108.58 ? H5B LMT 605 B 1 
HETATM 41 H "H6'2" LMT . . . L 10 145.691 120.596 160.576 1 109.37 ? "H6'2" LMT 605 B 1 
HETATM 42 H "H6'1" LMT . . . L 10 146.168 120.363 161.984 1 109.68 ? "H6'1" LMT 605 B 1 
HETATM 43 H H1' LMT . . . L 10 141.107 115.203 161.316 1 110.58 ? H1' LMT 605 B 1 
HETATM 44 H H2' LMT . . . L 10 142.378 117.041 159.602 1 108.93 ? H2' LMT 605 B 1 
HETATM 45 H H3' LMT . . . L 10 142.953 116.757 162.338 1 110.01 ? H3' LMT 605 B 1 
HETATM 46 H H4' LMT . . . L 10 141.554 118.963 161.283 1 108.87 ? H4' LMT 605 B 1 
HETATM 47 H H5' LMT . . . L 10 140.713 116.724 162.772 1 109.7 ? H5' LMT 605 B 1 
HETATM 48 H H6D LMT . . . L 10 138.953 118.772 162.098 1 108.31 ? H6D LMT 605 B 1 
HETATM 49 H H6E LMT . . . L 10 139.515 118.609 163.494 1 108.97 ? H6E LMT 605 B 1 
HETATM 50 H H12 LMT . . . L 10 138.625 115.45 159.22 1 108.3 ? H12 LMT 605 B 1 
HETATM 51 H H11 LMT . . . L 10 139.052 114.512 160.348 1 108.64 ? H11 LMT 605 B 1 
HETATM 52 H H22 LMT . . . L 10 139.594 112.856 158.933 1 109.37 ? H22 LMT 605 B 1 
HETATM 53 H H21 LMT . . . L 10 139.93 113.831 157.78 1 109.03 ? H21 LMT 605 B 1 
HETATM 54 H H32 LMT . . . L 10 138.064 112.828 157.028 1 109.68 ? H32 LMT 605 B 1 
HETATM 55 H H31 LMT . . . L 10 137.494 114.15 157.586 1 108.69 ? H31 LMT 605 B 1 
HETATM 56 H H42 LMT . . . L 10 137.179 113.015 159.711 1 109.18 ? H42 LMT 605 B 1 
HETATM 57 H H41 LMT . . . L 10 137.536 111.699 158.997 1 110.18 ? H41 LMT 605 B 1 
HETATM 58 H H52 LMT . . . L 10 135.738 112.342 157.401 1 109.3 ? H52 LMT 605 B 1 
HETATM 59 H H51 LMT . . . L 10 135.263 113.263 158.549 1 108.7 ? H51 LMT 605 B 1 
HETATM 60 H H62 LMT . . . L 10 135.463 111.046 159.838 1 109.46 ? H62 LMT 605 B 1 
HETATM 61 H H61 LMT . . . L 10 135.128 110.49 158.447 1 109.26 ? H61 LMT 605 B 1 
HETATM 62 H H72 LMT . . . L 10 133.511 112.403 159.776 1 109.24 ? H72 LMT 605 B 1 
HETATM 63 H H71 LMT . . . L 10 133.157 110.906 159.707 1 109.66 ? H71 LMT 605 B 1 
HETATM 64 H H82 LMT . . . L 10 133.287 111.196 157.252 1 109.78 ? H82 LMT 605 B 1 
HETATM 65 H H81 LMT . . . L 10 133.196 112.705 157.543 1 109.43 ? H81 LMT 605 B 1 
HETATM 66 H H92 LMT . . . L 10 131.148 110.976 158.432 1 110.17 ? H92 LMT 605 B 1 
HETATM 67 H H91 LMT . . . L 10 131.095 111.607 157.029 1 109.26 ? H91 LMT 605 B 1 
HETATM 68 H H102 LMT . . . L 10 131.171 113.773 157.959 1 108.64 ? H102 LMT 605 B 1 
HETATM 69 H H101 LMT . . . L 10 131.377 113.189 159.366 1 108.97 ? H101 LMT 605 B 1 
HETATM 70 H H112 LMT . . . L 10 129.188 113.692 159.313 1 109.53 ? H112 LMT 605 B 1 
HETATM 71 H H111 LMT . . . L 10 129.207 112.146 159.159 1 109.85 ? H111 LMT 605 B 1 
HETATM 72 H H123 LMT . . . L 10 127.761 113.117 157.554 1 109.19 ? H123 LMT 605 B 1 
HETATM 73 H H122 LMT . . . L 10 128.911 112.348 156.831 1 109.35 ? H122 LMT 605 B 1 
HETATM 74 H H121 LMT . . . L 10 128.974 113.911 156.964 1 108.5 ? H121 LMT 605 B 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    32 
_model_server_stats.query_time_ms           336 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           74 
#