data_8A4E # _model_server_result.job_id 8JNJ5iwIUBv6Ep--GXo_WQ _model_server_result.datetime_utc '2024-11-13 00:33:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8a4e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 8A4E # _exptl.entry_id 8A4E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 682.699 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '6-(3-TETRADECANOIC ACID) FLAVINE MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8A4E _cell.length_a 41.555 _cell.length_b 41.555 _cell.length_c 132.85 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8A4E _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 40 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 426 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C4A _struct_conn.ptnr2_label_comp_id FMA _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id FMA _struct_conn.ptnr2_auth_seq_id 601 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id A _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id A _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.765 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C31 H47 N4 O11 P' _chem_comp.formula_weight 682.699 _chem_comp.id FMA _chem_comp.mon_nstd_flag . _chem_comp.name '6-(3-TETRADECANOIC ACID) FLAVINE MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 FMA sing 83 n y N1 C10 FMA doub 84 n y C2 O2 FMA doub 85 n n C2 N3 FMA sing 86 n y N3 C4 FMA sing 87 n y N3 HN3 FMA sing 88 n n C4 O4 FMA doub 89 n n C4 C4A FMA sing 90 n y C4A N5 FMA doub 91 n y C4A C10 FMA sing 92 n y N5 C5A FMA sing 93 n y C5A C6 FMA doub 94 n y C5A C9A FMA sing 95 n y C6 C7 FMA sing 96 n y C6 C3' FMA sing 97 n n C7 C7M FMA sing 98 n n C7 C8 FMA doub 99 n y C7M HM71 FMA sing 100 n n C7M HM72 FMA sing 101 n n C7M HM73 FMA sing 102 n n C8 C8M FMA sing 103 n n C8 C9 FMA sing 104 n y C8M HM81 FMA sing 105 n n C8M HM82 FMA sing 106 n n C8M HM83 FMA sing 107 n n C9 C9A FMA doub 108 n y C9 H9 FMA sing 109 n n C9A N10 FMA sing 110 n y N10 C10 FMA sing 111 n y N10 C1B FMA sing 112 n n C1B C2B FMA sing 113 n n C1B "H1'1" FMA sing 114 n n C1B "H1'2" FMA sing 115 n n C2B O2B FMA sing 116 n n C2B C3B FMA sing 117 n n C2B H2' FMA sing 118 n n O2B HO2' FMA sing 119 n n C3B O3' FMA sing 120 n n C3B C4B FMA sing 121 n n C3B H3B FMA sing 122 n n O3' HO3' FMA sing 123 n n C4B O4' FMA sing 124 n n C4B C5B FMA sing 125 n n C4B H4' FMA sing 126 n n O4' HO4' FMA sing 127 n n C5B O5' FMA sing 128 n n C5B "H5'1" FMA sing 129 n n C5B "H5'2" FMA sing 130 n n O5' P FMA sing 131 n n P O1P FMA doub 132 n n P O2P FMA sing 133 n n P O3P FMA sing 134 n n O2P HOP2 FMA sing 135 n n O3P HOP3 FMA sing 136 n n C1' O1' FMA doub 137 n n C1' O2' FMA sing 138 n n C1' C2' FMA sing 139 n n O2' HO2A FMA sing 140 n n C2' C3' FMA sing 141 n n C2' "H2'1" FMA sing 142 n n C2' "H2'2" FMA sing 143 n n C3' C4' FMA sing 144 n n C3' H3' FMA sing 145 n n C4' C5' FMA sing 146 n n C4' "H4'1" FMA sing 147 n n C4' "H4'2" FMA sing 148 n n C5' C6' FMA sing 149 n n C5' H5B FMA sing 150 n n C5' H5D FMA sing 151 n n C6' C7' FMA sing 152 n n C6' "H6'1" FMA sing 153 n n C6' "H6'2" FMA sing 154 n n C7' C8' FMA sing 155 n n C7' "H7'1" FMA sing 156 n n C7' "H7'2" FMA sing 157 n n C8' C9' FMA sing 158 n n C8' "H8'1" FMA sing 159 n n C8' "H8'2" FMA sing 160 n n C9' C11 FMA sing 161 n n C9' "H9'1" FMA sing 162 n n C9' "H9'2" FMA sing 163 n n C11 C12 FMA sing 164 n n C11 H111 FMA sing 165 n n C11 H112 FMA sing 166 n n C12 C13 FMA sing 167 n n C12 H121 FMA sing 168 n n C12 H122 FMA sing 169 n n C13 C14 FMA sing 170 n n C13 H131 FMA sing 171 n n C13 H132 FMA sing 172 n n C14 C15 FMA sing 173 n n C14 H141 FMA sing 174 n n C14 H142 FMA sing 175 n n C15 H151 FMA sing 176 n n C15 H152 FMA sing 177 n n C15 H153 FMA sing 178 n n # _atom_sites.entry_id 8A4E _atom_sites.fract_transf_matrix[1][1] 0.024064 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024064 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007527 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMA A 1 601 500 FMA FMA . C 3 FMN A 1 602 500 FMN FMN . D 4 HOH A 1 701 11 HOH HOH . D 4 HOH A 2 702 8 HOH HOH . D 4 HOH A 3 703 22 HOH HOH . D 4 HOH A 4 704 6 HOH HOH . D 4 HOH A 5 705 28 HOH HOH . D 4 HOH A 6 706 12 HOH HOH . D 4 HOH A 7 707 20 HOH HOH . D 4 HOH A 8 708 27 HOH HOH . D 4 HOH A 9 709 10 HOH HOH . D 4 HOH A 10 710 3 HOH HOH . D 4 HOH A 11 711 7 HOH HOH . D 4 HOH A 12 712 33 HOH HOH . D 4 HOH A 13 713 1 HOH HOH . D 4 HOH A 14 714 5 HOH HOH . D 4 HOH A 15 715 13 HOH HOH . D 4 HOH A 16 716 9 HOH HOH . D 4 HOH A 17 717 23 HOH HOH . D 4 HOH A 18 718 2 HOH HOH . D 4 HOH A 19 719 15 HOH HOH . D 4 HOH A 20 720 17 HOH HOH . D 4 HOH A 21 721 14 HOH HOH . D 4 HOH A 22 722 4 HOH HOH . D 4 HOH A 23 723 45 HOH HOH . D 4 HOH A 24 724 43 HOH HOH . D 4 HOH A 25 725 26 HOH HOH . D 4 HOH A 26 726 19 HOH HOH . D 4 HOH A 27 727 21 HOH HOH . D 4 HOH A 28 728 47 HOH HOH . D 4 HOH A 29 729 16 HOH HOH . D 4 HOH A 30 730 41 HOH HOH . D 4 HOH A 31 731 18 HOH HOH . D 4 HOH A 32 732 29 HOH HOH . D 4 HOH A 33 733 36 HOH HOH . D 4 HOH A 34 734 32 HOH HOH . D 4 HOH A 35 735 42 HOH HOH . D 4 HOH A 36 736 24 HOH HOH . D 4 HOH A 37 737 46 HOH HOH . D 4 HOH A 38 738 31 HOH HOH . D 4 HOH A 39 739 38 HOH HOH . D 4 HOH A 40 740 25 HOH HOH . D 4 HOH A 41 741 40 HOH HOH . D 4 HOH A 42 742 34 HOH HOH . D 4 HOH A 43 743 30 HOH HOH . D 4 HOH A 44 744 35 HOH HOH . D 4 HOH A 45 745 44 HOH HOH . D 4 HOH A 46 746 37 HOH HOH . D 4 HOH A 47 747 39 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMA . A . B 2 7.362 1.876 13.003 0.7 26.07 ? N1 FMA 601 A 1 HETATM 2 C C2 FMA . A . B 2 7.979 2.138 14.295 0.7 28.55 ? C2 FMA 601 A 1 HETATM 3 O O2 FMA . A . B 2 8.595 3.121 14.457 0.7 26.59 ? O2 FMA 601 A 1 HETATM 4 N N3 FMA . A . B 2 7.827 1.176 15.386 0.7 28.22 ? N3 FMA 601 A 1 HETATM 5 C C4 FMA . A . B 2 7.087 -0.034 15.193 0.7 28.21 ? C4 FMA 601 A 1 HETATM 6 O O4 FMA . A . B 2 6.927 -0.788 16.086 0.7 28.84 ? O4 FMA 601 A 1 HETATM 7 C C4A FMA . A . B 2 6.226 -0.108 13.988 0.7 28.72 ? C4A FMA 601 A 1 HETATM 8 N N5 FMA . A . B 2 5.783 -1.454 13.707 0.7 26.19 ? N5 FMA 601 A 1 HETATM 9 C C5A FMA . A . B 2 5.153 -1.727 12.414 0.7 27.93 ? C5A FMA 601 A 1 HETATM 10 C C6 FMA . A . B 2 4.421 -2.893 12.242 0.7 27.65 ? C6 FMA 601 A 1 HETATM 11 C C7 FMA . A . B 2 3.839 -3.176 11.015 0.7 28.33 ? C7 FMA 601 A 1 HETATM 12 C C7M FMA . A . B 2 3.107 -4.527 11.116 0.7 30.33 ? C7M FMA 601 A 1 HETATM 13 C C8 FMA . A . B 2 3.968 -2.245 9.977 0.7 28.49 ? C8 FMA 601 A 1 HETATM 14 C C8M FMA . A . B 2 3.353 -2.514 8.602 0.7 31.02 ? C8M FMA 601 A 1 HETATM 15 C C9 FMA . A . B 2 4.695 -1.089 10.157 0.7 27.35 ? C9 FMA 601 A 1 HETATM 16 C C9A FMA . A . B 2 5.287 -0.83 11.372 0.7 25.32 ? C9A FMA 601 A 1 HETATM 17 N N10 FMA . A . B 2 6.019 0.425 11.579 0.7 25.7 ? N10 FMA 601 A 1 HETATM 18 C C10 FMA . A . B 2 6.621 0.654 12.842 0.7 26.03 ? C10 FMA 601 A 1 HETATM 19 C C1B FMA . A . B 2 6.309 1.355 10.503 0.7 26.3 ? C1B FMA 601 A 1 HETATM 20 C C2B FMA . A . B 2 5.427 2.507 10.146 0.7 25.68 ? C2B FMA 601 A 1 HETATM 21 O O2B FMA . A . B 2 4.132 2.016 10.23 0.7 28.09 ? O2B FMA 601 A 1 HETATM 22 C C3B FMA . A . B 2 5.801 2.924 8.724 0.7 27.89 ? C3B FMA 601 A 1 HETATM 23 O O3' FMA . A . B 2 5.865 1.797 7.886 0.7 24.82 ? O3' FMA 601 A 1 HETATM 24 C C4B FMA . A . B 2 7.172 3.608 8.636 0.7 28.8 ? C4B FMA 601 A 1 HETATM 25 O O4' FMA . A . B 2 7.112 4.811 9.367 0.7 28.18 ? O4' FMA 601 A 1 HETATM 26 C C5B FMA . A . B 2 7.592 3.916 7.192 0.7 29.54 ? C5B FMA 601 A 1 HETATM 27 O O5' FMA . A . B 2 6.5 4.345 6.432 0.7 27.34 ? O5' FMA 601 A 1 HETATM 28 P P FMA . A . B 2 6.174 5.949 6.461 0.7 31.24 ? P FMA 601 A 1 HETATM 29 O O1P FMA . A . B 2 4.771 6.065 5.873 0.7 30.6 ? O1P FMA 601 A 1 HETATM 30 O O2P FMA . A . B 2 7.201 6.673 5.655 0.7 33.17 ? O2P FMA 601 A 1 HETATM 31 O O3P FMA . A . B 2 6.189 6.52 7.881 0.7 28.43 ? O3P FMA 601 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 341 _model_server_stats.encode_time_ms 14 _model_server_stats.element_count 31 #