data_8A5M # _model_server_result.job_id -WixrqG-AngpdUml7kj8Dw _model_server_result.datetime_utc '2024-11-12 20:53:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8a5m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":201}' # _entry.id 8A5M # _exptl.entry_id 8A5M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.928 _cell.angle_gamma 90 _cell.entry_id 8A5M _cell.length_a 40.919 _cell.length_b 112.972 _cell.length_c 53.036 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8A5M _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,H 1 1 B,D,G,I,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 260 n n P O2 PO4 sing 261 n n P O3 PO4 sing 262 n n P O4 PO4 sing 263 n n # _atom_sites.entry_id 8A5M _atom_sites.fract_transf_matrix[1][1] 0.024439 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00561 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008852 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019345 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 PO4 A 1 201 1 PO4 PO4 . F 3 PO4 A 1 202 2 PO4 PO4 . G 3 PO4 B 1 201 3 PO4 PO4 . H 4 HOH A 1 301 27 HOH HOH . H 4 HOH A 2 302 13 HOH HOH . H 4 HOH A 3 303 24 HOH HOH . H 4 HOH A 4 304 9 HOH HOH . H 4 HOH A 5 305 6 HOH HOH . H 4 HOH A 6 306 7 HOH HOH . H 4 HOH A 7 307 26 HOH HOH . H 4 HOH A 8 308 31 HOH HOH . H 4 HOH A 9 309 10 HOH HOH . H 4 HOH A 10 310 28 HOH HOH . H 4 HOH A 11 311 20 HOH HOH . H 4 HOH A 12 312 19 HOH HOH . H 4 HOH A 13 313 30 HOH HOH . H 4 HOH A 14 314 3 HOH HOH . H 4 HOH A 15 315 17 HOH HOH . I 4 HOH B 1 301 12 HOH HOH . I 4 HOH B 2 302 29 HOH HOH . I 4 HOH B 3 303 1 HOH HOH . I 4 HOH B 4 304 16 HOH HOH . I 4 HOH B 5 305 32 HOH HOH . I 4 HOH B 6 306 4 HOH HOH . I 4 HOH B 7 307 23 HOH HOH . J 4 HOH E 1 101 22 HOH HOH . J 4 HOH E 2 102 21 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . G 3 -4.06 -34.328 -6.677 1 108.88 0 P PO4 201 B 1 HETATM 2 O O1 PO4 . . . G 3 -5.335 -34.394 -7.528 1 103.86 0 O1 PO4 201 B 1 HETATM 3 O O2 PO4 . . . G 3 -2.933 -35.065 -7.389 1 105.66 0 O2 PO4 201 B 1 HETATM 4 O O3 PO4 . . . G 3 -4.317 -35.018 -5.346 1 102.14 0 O3 PO4 201 B 1 HETATM 5 O O4 PO4 . . . G 3 -3.655 -32.856 -6.438 1 99.84 0 O4 PO4 201 B 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 323 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 5 #