data_8A5U
#
_model_server_result.job_id            fqUCv6M9EqnhG0dyX8C-Lw 
_model_server_result.datetime_utc      '2024-10-10 03:23:38' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8a5u 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":303}' 
#
_entry.id    8A5U 
#
_exptl.entry_id    8A5U 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              163.172 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            BICINE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8A5U 
_cell.length_a            50.998 
_cell.length_b            66.772 
_cell.length_c            73.591 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8A5U 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 137 B CYS 129 1_555 A SG CYS 151 B CYS 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? 
covale ? covale1 A ND2 ASN 122 B ASN 114 1_555 C C1 NAG . B NAG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.427 ? 
covale ? covale2 A ND2 ASN 150 B ASN 142 1_555 B C1 NAG . B NAG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.451 ? 
#
_chem_comp.formula           'C6 H13 N O4' 
_chem_comp.formula_weight    163.172 
_chem_comp.id                BCN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              BICINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C1 BCN sing 70 n n 
N1 C3 BCN sing 71 n n 
N1 C5 BCN sing 72 n n 
C1 C2 BCN sing 73 n n 
C1 H11 BCN sing 74 n n 
C1 H12 BCN sing 75 n n 
C2 O21 BCN doub 76 n n 
C2 O22 BCN sing 77 n n 
O22 HO2 BCN sing 78 n n 
C3 C4 BCN sing 79 n n 
C3 H31 BCN sing 80 n n 
C3 H32 BCN sing 81 n n 
C4 O4 BCN sing 82 n n 
C4 H41 BCN sing 83 n n 
C4 H42 BCN sing 84 n n 
O4 HO4 BCN sing 85 n n 
C5 C6 BCN sing 86 n n 
C5 H51 BCN sing 87 n n 
C5 H52 BCN sing 88 n n 
C6 O6 BCN sing 89 n n 
C6 H61 BCN sing 90 n n 
C6 H62 BCN sing 91 n n 
O6 HO6 BCN sing 92 n n 
#
_atom_sites.entry_id                     8A5U 
_atom_sites.fract_transf_matrix[1][1]    0.019609 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014976 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013589 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NAG B 1 301 209 NAG NAG . 
C 2 NAG B 1 302 210 NAG NAG . 
D 3 BCN B 1 303 401 BCN BCN . 
E 4 EDO B 1 304 501 EDO EDO . 
F 5 HOH B 1 401 30 HOH HOH . 
F 5 HOH B 2 402 8 HOH HOH . 
F 5 HOH B 3 403 15 HOH HOH . 
F 5 HOH B 4 404 37 HOH HOH . 
F 5 HOH B 5 405 1 HOH HOH . 
F 5 HOH B 6 406 48 HOH HOH . 
F 5 HOH B 7 407 7 HOH HOH . 
F 5 HOH B 8 408 5 HOH HOH . 
F 5 HOH B 9 409 3 HOH HOH . 
F 5 HOH B 10 410 43 HOH HOH . 
F 5 HOH B 11 411 17 HOH HOH . 
F 5 HOH B 12 412 4 HOH HOH . 
F 5 HOH B 13 413 19 HOH HOH . 
F 5 HOH B 14 414 6 HOH HOH . 
F 5 HOH B 15 415 10 HOH HOH . 
F 5 HOH B 16 416 22 HOH HOH . 
F 5 HOH B 17 417 46 HOH HOH . 
F 5 HOH B 18 418 2 HOH HOH . 
F 5 HOH B 19 419 18 HOH HOH . 
F 5 HOH B 20 420 9 HOH HOH . 
F 5 HOH B 21 421 13 HOH HOH . 
F 5 HOH B 22 422 50 HOH HOH . 
F 5 HOH B 23 423 47 HOH HOH . 
F 5 HOH B 24 424 25 HOH HOH . 
F 5 HOH B 25 425 21 HOH HOH . 
F 5 HOH B 26 426 12 HOH HOH . 
F 5 HOH B 27 427 20 HOH HOH . 
F 5 HOH B 28 428 45 HOH HOH . 
F 5 HOH B 29 429 52 HOH HOH . 
F 5 HOH B 30 430 42 HOH HOH . 
F 5 HOH B 31 431 28 HOH HOH . 
F 5 HOH B 32 432 40 HOH HOH . 
F 5 HOH B 33 433 14 HOH HOH . 
F 5 HOH B 34 434 16 HOH HOH . 
F 5 HOH B 35 435 27 HOH HOH . 
F 5 HOH B 36 436 36 HOH HOH . 
F 5 HOH B 37 437 24 HOH HOH . 
F 5 HOH B 38 438 41 HOH HOH . 
F 5 HOH B 39 439 35 HOH HOH . 
F 5 HOH B 40 440 23 HOH HOH . 
F 5 HOH B 41 441 11 HOH HOH . 
F 5 HOH B 42 442 49 HOH HOH . 
F 5 HOH B 43 443 39 HOH HOH . 
F 5 HOH B 44 444 34 HOH HOH . 
F 5 HOH B 45 445 44 HOH HOH . 
F 5 HOH B 46 446 26 HOH HOH . 
F 5 HOH B 47 447 38 HOH HOH . 
F 5 HOH B 48 448 33 HOH HOH . 
F 5 HOH B 49 449 51 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 BCN . . . D 3 9.693 22.036 39.094 1 69.93 ? N1 BCN 303 B 1 
HETATM 2 C C1 BCN . . . D 3 10.811 21.509 38.281 1 80.98 ? C1 BCN 303 B 1 
HETATM 3 C C2 BCN . . . D 3 10.573 19.995 38.052 1 76.19 ? C2 BCN 303 B 1 
HETATM 4 O O21 BCN . . . D 3 9.466 19.58 37.585 1 73.7 -1 O21 BCN 303 B 1 
HETATM 5 O O22 BCN . . . D 3 11.486 19.172 38.347 1 78.76 ? O22 BCN 303 B 1 
HETATM 6 C C3 BCN . . . D 3 9.35 23.465 38.845 1 57.83 ? C3 BCN 303 B 1 
HETATM 7 C C4 BCN . . . D 3 8.526 23.54 37.53 1 69.08 ? C4 BCN 303 B 1 
HETATM 8 O O4 BCN . . . D 3 8.127 24.864 37.271 1 69.72 ? O4 BCN 303 B 1 
HETATM 9 C C5 BCN . . . D 3 9.732 21.517 40.482 1 69.38 ? C5 BCN 303 B 1 
HETATM 10 C C6 BCN . . . D 3 8.836 20.243 40.581 1 70.73 ? C6 BCN 303 B 1 
HETATM 11 O O6 BCN . . . D 3 9.635 19.086 40.572 1 69.59 ? O6 BCN 303 B 1 
HETATM 12 H H11 BCN . . . D 3 11.65 21.643 38.75 1 97.06 ? H11 BCN 303 B 1 
HETATM 13 H H12 BCN . . . D 3 10.843 21.97 37.428 1 97.06 ? H12 BCN 303 B 1 
HETATM 14 H H31 BCN . . . D 3 8.825 23.812 39.583 1 69.28 ? H31 BCN 303 B 1 
HETATM 15 H H32 BCN . . . D 3 10.162 23.989 38.756 1 69.28 ? H32 BCN 303 B 1 
HETATM 16 H H41 BCN . . . D 3 7.738 22.982 37.616 1 82.77 ? H41 BCN 303 B 1 
HETATM 17 H H42 BCN . . . D 3 9.073 23.223 36.794 1 82.77 ? H42 BCN 303 B 1 
HETATM 18 H HO4 BCN . . . D 3 7.702 25.166 37.937 1 83.54 ? HO4 BCN 303 B 1 
HETATM 19 H H51 BCN . . . D 3 9.402 22.195 41.092 1 83.14 ? H51 BCN 303 B 1 
HETATM 20 H H52 BCN . . . D 3 10.645 21.291 40.718 1 83.14 ? H52 BCN 303 B 1 
HETATM 21 H H61 BCN . . . D 3 8.23 20.219 39.824 1 84.76 ? H61 BCN 303 B 1 
HETATM 22 H H62 BCN . . . D 3 8.327 20.274 41.406 1 84.76 ? H62 BCN 303 B 1 
HETATM 23 H HO6 BCN . . . D 3 10.186 19.124 41.217 1 83.39 ? HO6 BCN 303 B 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           25 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           262 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           23 
#