data_8A5W
#
_model_server_result.job_id            OHB1VolOeNK_fNTCUhUcNg 
_model_server_result.datetime_utc      '2024-10-25 20:25:36' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8a5w 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":501}' 
#
_entry.id    8A5W 
#
_exptl.entry_id    8A5W 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              185.072 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            PHOSPHOSERINE 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          97.875 
_cell.angle_gamma         90 
_cell.entry_id            8A5W 
_cell.length_a            65.433 
_cell.length_b            205.742 
_cell.length_c            135.75 
_cell.Z_PDB               10 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8A5W 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    'P 2yb' 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
PISA dimeric 2 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y 1 1 
A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y 2 1 
A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y 3 1 
A,C,D,E,F,G,H,I,K,L,M,N,O,P,Q,R,T,U,V,W,X,Y 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 J N N 
? 4 K N N 
? 4 L N N 
? 4 M N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 B C GLN 222 E GLN 199 1_555 B N LLP 223 E LLP 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? 
covale ? covale2 B C LLP 223 E LLP 200 1_555 B N ASN 224 E ASN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale3 B C4' LLP 223 E LLP 200 1_555 J N SEP . E SEP 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.468 ? 
covale ? covale4 C C GLN 222 C GLN 199 1_555 C N LLP 223 C LLP 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale5 C C LLP 223 C LLP 200 1_555 C N ASN 224 C ASN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? 
covale ? covale6 D C GLN 222 B GLN 199 1_555 D N LLP 223 B LLP 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? 
covale ? covale7 D C LLP 223 B LLP 200 1_555 D N ASN 224 B ASN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? 
covale ? covale8 G C GLN 222 G GLN 199 1_555 G N LLP 223 G LLP 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? 
covale ? covale9 G C LLP 223 G LLP 200 1_555 G N ASN 224 G ASN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? 
covale ? covale10 H C GLN 222 H GLN 199 1_555 H N LLP 223 H LLP 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? 
covale ? covale11 H C LLP 223 H LLP 200 1_555 H N ASN 224 H ASN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
#
_chem_comp.formula           'C3 H8 N O6 P' 
_chem_comp.formula_weight    185.072 
_chem_comp.id                SEP 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              PHOSPHOSERINE 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     PHOSPHONOSERINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA SEP sing 395 n n 
N H SEP sing 396 n n 
N H2 SEP sing 397 n n 
CA CB SEP sing 398 n n 
CA C SEP sing 399 n n 
CA HA SEP sing 400 n n 
CB OG SEP sing 401 n n 
CB HB2 SEP sing 402 n n 
CB HB3 SEP sing 403 n n 
OG P SEP sing 404 n n 
C O SEP doub 405 n n 
C OXT SEP sing 406 n n 
OXT HXT SEP sing 407 n n 
P O1P SEP doub 408 n n 
P O2P SEP sing 409 n n 
P O3P SEP sing 410 n n 
O2P HOP2 SEP sing 411 n n 
O3P HOP3 SEP sing 412 n n 
#
_atom_sites.entry_id                     8A5W 
_atom_sites.fract_transf_matrix[1][1]    0.015283 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002114 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00486 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007437 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 3 E1U D 1 401 401 E1U 0PE . 
J 4 SEP E 1 401 200 SEP 8YS . 
K 4 SEP C 1 501 501 SEP SEP . 
L 4 SEP B 1 501 501 SEP SEP . 
M 4 SEP B 1 502 701 SEP SEP . 
N 3 E1U F 1 401 401 E1U 0PE . 
O 5 PMP A 1 801 801 PMP PMP . 
P 6 SO4 G 1 801 801 SO4 SO4 . 
Q 6 SO4 H 1 701 701 SO4 SO4 . 
R 7 HOH D 1 501 33 HOH HOH . 
R 7 HOH D 2 502 13 HOH HOH . 
R 7 HOH D 3 503 58 HOH HOH . 
R 7 HOH D 4 504 85 HOH HOH . 
R 7 HOH D 5 505 17 HOH HOH . 
R 7 HOH D 6 506 21 HOH HOH . 
R 7 HOH D 7 507 42 HOH HOH . 
R 7 HOH D 8 508 87 HOH HOH . 
R 7 HOH D 9 509 32 HOH HOH . 
R 7 HOH D 10 510 68 HOH HOH . 
R 7 HOH D 11 511 55 HOH HOH . 
R 7 HOH D 12 512 95 HOH HOH . 
R 7 HOH D 13 513 34 HOH HOH . 
R 7 HOH D 14 514 94 HOH HOH . 
R 7 HOH D 15 515 41 HOH HOH . 
R 7 HOH D 16 516 31 HOH HOH . 
S 7 HOH E 1 501 60 HOH HOH . 
S 7 HOH E 2 502 2 HOH HOH . 
S 7 HOH E 3 503 7 HOH HOH . 
S 7 HOH E 4 504 8 HOH HOH . 
S 7 HOH E 5 505 6 HOH HOH . 
S 7 HOH E 6 506 109 HOH HOH . 
S 7 HOH E 7 507 29 HOH HOH . 
S 7 HOH E 8 508 104 HOH HOH . 
S 7 HOH E 9 509 12 HOH HOH . 
S 7 HOH E 10 510 1 HOH HOH . 
S 7 HOH E 11 511 81 HOH HOH . 
S 7 HOH E 12 512 76 HOH HOH . 
S 7 HOH E 13 513 57 HOH HOH . 
S 7 HOH E 14 514 106 HOH HOH . 
S 7 HOH E 15 515 92 HOH HOH . 
S 7 HOH E 16 516 93 HOH HOH . 
T 7 HOH C 1 601 10 HOH HOH . 
T 7 HOH C 2 602 67 HOH HOH . 
T 7 HOH C 3 603 5 HOH HOH . 
T 7 HOH C 4 604 15 HOH HOH . 
T 7 HOH C 5 605 96 HOH HOH . 
T 7 HOH C 6 606 53 HOH HOH . 
T 7 HOH C 7 607 44 HOH HOH . 
T 7 HOH C 8 608 18 HOH HOH . 
T 7 HOH C 9 609 37 HOH HOH . 
T 7 HOH C 10 610 88 HOH HOH . 
T 7 HOH C 11 611 112 HOH HOH . 
T 7 HOH C 12 612 43 HOH HOH . 
T 7 HOH C 13 613 35 HOH HOH . 
T 7 HOH C 14 614 113 HOH HOH . 
U 7 HOH B 1 601 36 HOH HOH . 
U 7 HOH B 2 602 59 HOH HOH . 
U 7 HOH B 3 603 63 HOH HOH . 
U 7 HOH B 4 604 56 HOH HOH . 
U 7 HOH B 5 605 86 HOH HOH . 
U 7 HOH B 6 606 89 HOH HOH . 
U 7 HOH B 7 607 97 HOH HOH . 
U 7 HOH B 8 608 115 HOH HOH . 
V 7 HOH F 1 501 4 HOH HOH . 
V 7 HOH F 2 502 26 HOH HOH . 
V 7 HOH F 3 503 24 HOH HOH . 
V 7 HOH F 4 504 30 HOH HOH . 
V 7 HOH F 5 505 51 HOH HOH . 
V 7 HOH F 6 506 52 HOH HOH . 
V 7 HOH F 7 507 72 HOH HOH . 
V 7 HOH F 8 508 80 HOH HOH . 
V 7 HOH F 9 509 71 HOH HOH . 
V 7 HOH F 10 510 14 HOH HOH . 
V 7 HOH F 11 511 3 HOH HOH . 
V 7 HOH F 12 512 47 HOH HOH . 
V 7 HOH F 13 513 110 HOH HOH . 
V 7 HOH F 14 514 100 HOH HOH . 
V 7 HOH F 15 515 79 HOH HOH . 
V 7 HOH F 16 516 107 HOH HOH . 
V 7 HOH F 17 517 66 HOH HOH . 
V 7 HOH F 18 518 98 HOH HOH . 
V 7 HOH F 19 519 101 HOH HOH . 
V 7 HOH F 20 520 108 HOH HOH . 
V 7 HOH F 21 521 82 HOH HOH . 
W 7 HOH A 1 901 49 HOH HOH . 
W 7 HOH A 2 902 102 HOH HOH . 
W 7 HOH A 3 903 69 HOH HOH . 
W 7 HOH A 4 904 45 HOH HOH . 
W 7 HOH A 5 905 70 HOH HOH . 
W 7 HOH A 6 906 105 HOH HOH . 
W 7 HOH A 7 907 9 HOH HOH . 
W 7 HOH A 8 908 84 HOH HOH . 
W 7 HOH A 9 909 90 HOH HOH . 
W 7 HOH A 10 910 39 HOH HOH . 
W 7 HOH A 11 911 114 HOH HOH . 
W 7 HOH A 12 912 118 HOH HOH . 
W 7 HOH A 13 913 119 HOH HOH . 
W 7 HOH A 14 914 116 HOH HOH . 
X 7 HOH G 1 901 75 HOH HOH . 
X 7 HOH G 2 902 65 HOH HOH . 
X 7 HOH G 3 903 19 HOH HOH . 
X 7 HOH G 4 904 103 HOH HOH . 
X 7 HOH G 5 905 40 HOH HOH . 
X 7 HOH G 6 906 16 HOH HOH . 
X 7 HOH G 7 907 22 HOH HOH . 
X 7 HOH G 8 908 28 HOH HOH . 
X 7 HOH G 9 909 99 HOH HOH . 
X 7 HOH G 10 910 38 HOH HOH . 
X 7 HOH G 11 911 54 HOH HOH . 
X 7 HOH G 12 912 11 HOH HOH . 
X 7 HOH G 13 913 91 HOH HOH . 
X 7 HOH G 14 914 46 HOH HOH . 
X 7 HOH G 15 915 111 HOH HOH . 
X 7 HOH G 16 916 74 HOH HOH . 
X 7 HOH G 17 917 27 HOH HOH . 
X 7 HOH G 18 918 77 HOH HOH . 
Y 7 HOH H 1 801 61 HOH HOH . 
Y 7 HOH H 2 802 50 HOH HOH . 
Y 7 HOH H 3 803 48 HOH HOH . 
Y 7 HOH H 4 804 62 HOH HOH . 
Y 7 HOH H 5 805 20 HOH HOH . 
Y 7 HOH H 6 806 83 HOH HOH . 
Y 7 HOH H 7 807 117 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N SEP . . . L 4 -6.572 -57.815 -2.022 1 48.82 ? N SEP 501 B 1 
HETATM 2 C CA SEP . . . L 4 -6.99 -57.561 -0.649 1 55.84 ? CA SEP 501 B 1 
HETATM 3 C CB SEP . . . L 4 -6.193 -58.447 0.31 1 50.85 ? CB SEP 501 B 1 
HETATM 4 O OG SEP . . . L 4 -7.035 -59.009 1.306 1 56.22 ? OG SEP 501 B 1 
HETATM 5 C C SEP . . . L 4 -6.828 -56.086 -0.27 1 56.01 ? C SEP 501 B 1 
HETATM 6 O O SEP . . . L 4 -5.719 -55.54 -0.299 1 54.83 ? O SEP 501 B 1 
HETATM 7 O OXT SEP . . . L 4 -7.804 -55.406 0.065 1 45.61 ? OXT SEP 501 B 1 
HETATM 8 P P SEP . . . L 4 -7.237 -60.584 1.024 1 65.16 ? P SEP 501 B 1 
HETATM 9 O O1P SEP . . . L 4 -7.269 -60.831 -0.566 1 67.29 ? O1P SEP 501 B 1 
HETATM 10 O O2P SEP . . . L 4 -6.01 -61.405 1.668 1 58.72 ? O2P SEP 501 B 1 
HETATM 11 O O3P SEP . . . L 4 -8.625 -61.101 1.656 1 54.1 ? O3P SEP 501 B 1 
#
_model_server_stats.io_time_ms              83 
_model_server_stats.parse_time_ms           18 
_model_server_stats.create_model_time_ms    63 
_model_server_stats.query_time_ms           346 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           11 
#