data_8A70 # _model_server_result.job_id Zc62IQCd-vgG9y0RI0SnbQ _model_server_result.datetime_utc '2024-11-24 17:28:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8a70 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 8A70 # _exptl.entry_id 8A70 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.43 _cell.angle_gamma 90 _cell.entry_id 8A70 _cell.length_a 59.32 _cell.length_b 77.31 _cell.length_c 88.68 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8A70 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 96 A ASP 179 1_555 D MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? metalc ? metalc2 A OD2 ASP 96 A ASP 179 1_555 E MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc3 A OD1 ASP 100 A ASP 183 1_555 D MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? metalc ? metalc4 A OD1 ASP 100 A ASP 183 1_555 E MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.439 ? metalc ? metalc5 A OD2 ASP 236 A ASP 319 1_555 C MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? metalc ? metalc6 C MG MG . A MG 501 1_555 I O HOH . A HOH 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.988 ? metalc ? metalc7 C MG MG . A MG 501 1_555 I O HOH . A HOH 611 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.946 ? metalc ? metalc8 C MG MG . A MG 501 1_555 I O HOH . A HOH 624 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? metalc ? metalc9 C MG MG . A MG 501 1_555 I O HOH . A HOH 629 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.994 ? metalc ? metalc10 C MG MG . A MG 501 1_555 I O HOH . A HOH 650 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.426 ? metalc ? metalc11 D MG MG . A MG 502 1_555 G O1A GPP . A GPP 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? metalc ? metalc12 D MG MG . A MG 502 1_555 G O1B GPP . A GPP 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.875 ? metalc ? metalc13 D MG MG . A MG 502 1_555 I O HOH . A HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc14 D MG MG . A MG 502 1_555 I O HOH . A HOH 612 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? metalc ? metalc15 E MG MG . A MG 503 1_555 G O1A GPP . A GPP 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? metalc ? metalc16 E MG MG . A MG 503 1_555 I O HOH . A HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.983 ? metalc ? metalc17 E MG MG . A MG 503 1_555 I O HOH . A HOH 617 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? metalc ? metalc18 E MG MG . A MG 503 1_555 I O HOH . A HOH 664 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? metalc ? metalc19 F MG MG . A MG 504 1_555 G O3B GPP . A GPP 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? metalc ? metalc20 F MG MG . A MG 504 1_555 I O HOH . A HOH 644 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.212 ? metalc ? metalc21 F MG MG . A MG 504 1_555 I O HOH . A HOH 648 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? metalc ? metalc22 F MG MG . A MG 504 1_555 I O HOH . A HOH 654 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.269 ? metalc ? metalc23 F MG MG . A MG 504 1_555 I O HOH . A HOH 660 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.224 ? metalc ? metalc24 F MG MG . A MG 504 1_555 I O HOH . A HOH 669 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? metalc ? metalc25 B OD2 ASP 236 B ASP 319 1_555 H MG MG . B MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? metalc ? metalc26 H MG MG . B MG 501 1_555 J O HOH . B HOH 626 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.89 ? metalc ? metalc27 H MG MG . B MG 501 1_555 J O HOH . B HOH 630 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? metalc ? metalc28 H MG MG . B MG 501 1_555 J O HOH . B HOH 636 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc29 H MG MG . B MG 501 1_555 J O HOH . B HOH 641 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? metalc ? metalc30 H MG MG . B MG 501 1_555 J O HOH . B HOH 653 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8A70 _atom_sites.fract_transf_matrix[1][1] 0.016858 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003408 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012935 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011505 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 501 584 MG MG . D 2 MG A 1 502 585 MG MG . E 2 MG A 1 503 586 MG MG . F 2 MG A 1 504 587 MG MG . G 3 GPP A 1 505 984 GPP GPP . H 2 MG B 1 501 584 MG MG . I 4 HOH A 1 601 143 HOH HOH . I 4 HOH A 2 602 126 HOH HOH . I 4 HOH A 3 603 41 HOH HOH . I 4 HOH A 4 604 141 HOH HOH . I 4 HOH A 5 605 31 HOH HOH . I 4 HOH A 6 606 90 HOH HOH . I 4 HOH A 7 607 110 HOH HOH . I 4 HOH A 8 608 50 HOH HOH . I 4 HOH A 9 609 20 HOH HOH . I 4 HOH A 10 610 28 HOH HOH . I 4 HOH A 11 611 134 HOH HOH . I 4 HOH A 12 612 145 HOH HOH . I 4 HOH A 13 613 19 HOH HOH . I 4 HOH A 14 614 140 HOH HOH . I 4 HOH A 15 615 92 HOH HOH . I 4 HOH A 16 616 43 HOH HOH . I 4 HOH A 17 617 142 HOH HOH . I 4 HOH A 18 618 78 HOH HOH . I 4 HOH A 19 619 7 HOH HOH . I 4 HOH A 20 620 69 HOH HOH . I 4 HOH A 21 621 23 HOH HOH . I 4 HOH A 22 622 46 HOH HOH . I 4 HOH A 23 623 87 HOH HOH . I 4 HOH A 24 624 125 HOH HOH . I 4 HOH A 25 625 30 HOH HOH . I 4 HOH A 26 626 113 HOH HOH . I 4 HOH A 27 627 123 HOH HOH . I 4 HOH A 28 628 85 HOH HOH . I 4 HOH A 29 629 114 HOH HOH . I 4 HOH A 30 630 64 HOH HOH . I 4 HOH A 31 631 77 HOH HOH . I 4 HOH A 32 632 139 HOH HOH . I 4 HOH A 33 633 13 HOH HOH . I 4 HOH A 34 634 102 HOH HOH . I 4 HOH A 35 635 53 HOH HOH . I 4 HOH A 36 636 149 HOH HOH . I 4 HOH A 37 637 71 HOH HOH . I 4 HOH A 38 638 133 HOH HOH . I 4 HOH A 39 639 55 HOH HOH . I 4 HOH A 40 640 4 HOH HOH . I 4 HOH A 41 641 38 HOH HOH . I 4 HOH A 42 642 47 HOH HOH . I 4 HOH A 43 643 101 HOH HOH . I 4 HOH A 44 644 97 HOH HOH . I 4 HOH A 45 645 150 HOH HOH . I 4 HOH A 46 646 1 HOH HOH . I 4 HOH A 47 647 26 HOH HOH . I 4 HOH A 48 648 146 HOH HOH . I 4 HOH A 49 649 9 HOH HOH . I 4 HOH A 50 650 62 HOH HOH . I 4 HOH A 51 651 99 HOH HOH . I 4 HOH A 52 652 48 HOH HOH . I 4 HOH A 53 653 107 HOH HOH . I 4 HOH A 54 654 148 HOH HOH . I 4 HOH A 55 655 37 HOH HOH . I 4 HOH A 56 656 151 HOH HOH . I 4 HOH A 57 657 67 HOH HOH . I 4 HOH A 58 658 106 HOH HOH . I 4 HOH A 59 659 73 HOH HOH . I 4 HOH A 60 660 116 HOH HOH . I 4 HOH A 61 661 42 HOH HOH . I 4 HOH A 62 662 76 HOH HOH . I 4 HOH A 63 663 74 HOH HOH . I 4 HOH A 64 664 144 HOH HOH . I 4 HOH A 65 665 156 HOH HOH . I 4 HOH A 66 666 128 HOH HOH . I 4 HOH A 67 667 5 HOH HOH . I 4 HOH A 68 668 153 HOH HOH . I 4 HOH A 69 669 147 HOH HOH . I 4 HOH A 70 670 122 HOH HOH . I 4 HOH A 71 671 130 HOH HOH . I 4 HOH A 72 672 155 HOH HOH . I 4 HOH A 73 673 154 HOH HOH . I 4 HOH A 74 674 117 HOH HOH . I 4 HOH A 75 675 75 HOH HOH . I 4 HOH A 76 676 138 HOH HOH . I 4 HOH A 77 677 152 HOH HOH . J 4 HOH B 1 601 118 HOH HOH . J 4 HOH B 2 602 14 HOH HOH . J 4 HOH B 3 603 58 HOH HOH . J 4 HOH B 4 604 25 HOH HOH . J 4 HOH B 5 605 159 HOH HOH . J 4 HOH B 6 606 61 HOH HOH . J 4 HOH B 7 607 21 HOH HOH . J 4 HOH B 8 608 111 HOH HOH . J 4 HOH B 9 609 98 HOH HOH . J 4 HOH B 10 610 6 HOH HOH . J 4 HOH B 11 611 91 HOH HOH . J 4 HOH B 12 612 32 HOH HOH . J 4 HOH B 13 613 40 HOH HOH . J 4 HOH B 14 614 120 HOH HOH . J 4 HOH B 15 615 51 HOH HOH . J 4 HOH B 16 616 29 HOH HOH . J 4 HOH B 17 617 86 HOH HOH . J 4 HOH B 18 618 35 HOH HOH . J 4 HOH B 19 619 8 HOH HOH . J 4 HOH B 20 620 83 HOH HOH . J 4 HOH B 21 621 17 HOH HOH . J 4 HOH B 22 622 34 HOH HOH . J 4 HOH B 23 623 136 HOH HOH . J 4 HOH B 24 624 52 HOH HOH . J 4 HOH B 25 625 2 HOH HOH . J 4 HOH B 26 626 22 HOH HOH . J 4 HOH B 27 627 105 HOH HOH . J 4 HOH B 28 628 60 HOH HOH . J 4 HOH B 29 629 3 HOH HOH . J 4 HOH B 30 630 89 HOH HOH . J 4 HOH B 31 631 56 HOH HOH . J 4 HOH B 32 632 96 HOH HOH . J 4 HOH B 33 633 10 HOH HOH . J 4 HOH B 34 634 16 HOH HOH . J 4 HOH B 35 635 65 HOH HOH . J 4 HOH B 36 636 135 HOH HOH . J 4 HOH B 37 637 124 HOH HOH . J 4 HOH B 38 638 18 HOH HOH . J 4 HOH B 39 639 94 HOH HOH . J 4 HOH B 40 640 115 HOH HOH . J 4 HOH B 41 641 54 HOH HOH . J 4 HOH B 42 642 24 HOH HOH . J 4 HOH B 43 643 33 HOH HOH . J 4 HOH B 44 644 45 HOH HOH . J 4 HOH B 45 645 88 HOH HOH . J 4 HOH B 46 646 109 HOH HOH . J 4 HOH B 47 647 44 HOH HOH . J 4 HOH B 48 648 93 HOH HOH . J 4 HOH B 49 649 68 HOH HOH . J 4 HOH B 50 650 36 HOH HOH . J 4 HOH B 51 651 63 HOH HOH . J 4 HOH B 52 652 15 HOH HOH . J 4 HOH B 53 653 160 HOH HOH . J 4 HOH B 54 654 70 HOH HOH . J 4 HOH B 55 655 39 HOH HOH . J 4 HOH B 56 656 12 HOH HOH . J 4 HOH B 57 657 103 HOH HOH . J 4 HOH B 58 658 57 HOH HOH . J 4 HOH B 59 659 49 HOH HOH . J 4 HOH B 60 660 66 HOH HOH . J 4 HOH B 61 661 84 HOH HOH . J 4 HOH B 62 662 27 HOH HOH . J 4 HOH B 63 663 121 HOH HOH . J 4 HOH B 64 664 11 HOH HOH . J 4 HOH B 65 665 72 HOH HOH . J 4 HOH B 66 666 132 HOH HOH . J 4 HOH B 67 667 100 HOH HOH . J 4 HOH B 68 668 112 HOH HOH . J 4 HOH B 69 669 95 HOH HOH . J 4 HOH B 70 670 127 HOH HOH . J 4 HOH B 71 671 81 HOH HOH . J 4 HOH B 72 672 108 HOH HOH . J 4 HOH B 73 673 157 HOH HOH . J 4 HOH B 74 674 59 HOH HOH . J 4 HOH B 75 675 104 HOH HOH . J 4 HOH B 76 676 82 HOH HOH . J 4 HOH B 77 677 129 HOH HOH . J 4 HOH B 78 678 137 HOH HOH . J 4 HOH B 79 679 79 HOH HOH . J 4 HOH B 80 680 119 HOH HOH . J 4 HOH B 81 681 158 HOH HOH . J 4 HOH B 82 682 80 HOH HOH . J 4 HOH B 83 683 131 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 19.97 _atom_site.Cartn_y 13.827 _atom_site.Cartn_z 37.167 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 44.11 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 501 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 78 _model_server_stats.parse_time_ms 39 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 1 #