data_8A97 # _model_server_result.job_id 1F24yTs-83K4q-DyTOyE1A _model_server_result.datetime_utc '2024-11-23 04:50:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8a97 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":501}' # _entry.id 8A97 # _exptl.entry_id 8A97 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 131.293 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description XENON _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8A97 _cell.length_a 44.86 _cell.length_b 169.46 _cell.length_c 169.31 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8A97 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,N 1 1 B,G,H,I,O 2 1 C,J,K,P 3 1 D,L,M,Q 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 G N N ? 2 J N N ? 2 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 49 AAA CYS 37 1_555 A SG CYS 196 AAA CYS 184 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf2 B SG CYS 49 BBB CYS 37 1_555 B SG CYS 196 BBB CYS 184 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf3 C SG CYS 49 CCC CYS 37 1_555 C SG CYS 196 CCC CYS 184 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf4 D SG CYS 49 DDD CYS 37 1_555 D SG CYS 196 DDD CYS 184 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? # _chem_comp.formula Xe _chem_comp.formula_weight 131.293 _chem_comp.id XE _chem_comp.mon_nstd_flag . _chem_comp.name XENON _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8A97 _atom_sites.fract_transf_matrix[1][1] 0.022292 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005901 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005906 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 XE AAA 1 501 501 XE XE . F 3 TAR AAA 1 502 1 TAR TAR . G 2 XE BBB 1 501 501 XE XE . H 3 TAR BBB 1 502 2 TAR TAR . I 3 TAR BBB 1 503 3 TAR TAR . J 2 XE CCC 1 501 501 XE XE . K 3 TAR CCC 1 502 4 TAR TAR . L 2 XE DDD 1 501 501 XE XE . M 3 TAR DDD 1 502 5 TAR TAR . N 4 HOH AAA 1 601 12 HOH HOH . N 4 HOH AAA 2 602 13 HOH HOH . N 4 HOH AAA 3 603 35 HOH HOH . N 4 HOH AAA 4 604 19 HOH HOH . N 4 HOH AAA 5 605 23 HOH HOH . N 4 HOH AAA 6 606 30 HOH HOH . N 4 HOH AAA 7 607 24 HOH HOH . N 4 HOH AAA 8 608 25 HOH HOH . N 4 HOH AAA 9 609 11 HOH HOH . N 4 HOH AAA 10 610 10 HOH HOH . N 4 HOH AAA 11 611 46 HOH HOH . N 4 HOH AAA 12 612 27 HOH HOH . N 4 HOH AAA 13 613 45 HOH HOH . N 4 HOH AAA 14 614 47 HOH HOH . O 4 HOH BBB 1 601 1 HOH HOH . O 4 HOH BBB 2 602 18 HOH HOH . O 4 HOH BBB 3 603 4 HOH HOH . O 4 HOH BBB 4 604 15 HOH HOH . O 4 HOH BBB 5 605 41 HOH HOH . O 4 HOH BBB 6 606 29 HOH HOH . O 4 HOH BBB 7 607 42 HOH HOH . O 4 HOH BBB 8 608 2 HOH HOH . O 4 HOH BBB 9 609 40 HOH HOH . O 4 HOH BBB 10 610 43 HOH HOH . O 4 HOH BBB 11 611 6 HOH HOH . O 4 HOH BBB 12 612 7 HOH HOH . O 4 HOH BBB 13 613 44 HOH HOH . P 4 HOH CCC 1 601 17 HOH HOH . P 4 HOH CCC 2 602 20 HOH HOH . P 4 HOH CCC 3 603 31 HOH HOH . P 4 HOH CCC 4 604 8 HOH HOH . P 4 HOH CCC 5 605 32 HOH HOH . P 4 HOH CCC 6 606 14 HOH HOH . P 4 HOH CCC 7 607 34 HOH HOH . P 4 HOH CCC 8 608 26 HOH HOH . P 4 HOH CCC 9 609 48 HOH HOH . Q 4 HOH DDD 1 601 22 HOH HOH . Q 4 HOH DDD 2 602 3 HOH HOH . Q 4 HOH DDD 3 603 16 HOH HOH . Q 4 HOH DDD 4 604 37 HOH HOH . Q 4 HOH DDD 5 605 36 HOH HOH . Q 4 HOH DDD 6 606 21 HOH HOH . Q 4 HOH DDD 7 607 28 HOH HOH . Q 4 HOH DDD 8 608 5 HOH HOH . Q 4 HOH DDD 9 609 9 HOH HOH . Q 4 HOH DDD 10 610 38 HOH HOH . Q 4 HOH DDD 11 611 33 HOH HOH . Q 4 HOH DDD 12 612 39 HOH HOH . Q 4 HOH DDD 13 613 49 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol XE _atom_site.label_atom_id XE _atom_site.label_comp_id XE _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 2 _atom_site.Cartn_x -7.6 _atom_site.Cartn_y 63.216 _atom_site.Cartn_z -35.136 _atom_site.occupancy 0.53 _atom_site.B_iso_or_equiv 81.51 _atom_site.pdbx_formal_charge 0 _atom_site.auth_atom_id XE _atom_site.auth_comp_id XE _atom_site.auth_seq_id 501 _atom_site.auth_asym_id BBB _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #