data_8A9Q # _model_server_result.job_id -uQ0mWKAv2tJNeX72xDTbQ _model_server_result.datetime_utc '2024-11-27 13:27:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8a9q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":605}' # _entry.id 8A9Q # _exptl.entry_id 8A9Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 308.328 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description R-WARFARIN _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 74.35 _cell.angle_beta 89.29 _cell.angle_gamma 79.98 _cell.entry_id 8A9Q _cell.length_a 38.26 _cell.length_b 92.128 _cell.length_c 95.553 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8A9Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,M 1 1 B,H,I,J,K,L,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 53 A CYS 53 1_555 A SG CYS 62 A CYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? disulf ? disulf2 A SG CYS 75 A CYS 75 1_555 A SG CYS 91 A CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? disulf ? disulf3 A SG CYS 90 A CYS 90 1_555 A SG CYS 101 A CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? disulf ? disulf4 A SG CYS 124 A CYS 124 1_555 A SG CYS 169 A CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? disulf ? disulf5 A SG CYS 168 A CYS 168 1_555 A SG CYS 177 A CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? disulf ? disulf6 A SG CYS 200 A CYS 200 1_555 A SG CYS 246 A CYS 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf7 A SG CYS 245 A CYS 245 1_555 A SG CYS 253 A CYS 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? disulf ? disulf8 A SG CYS 265 A CYS 265 1_555 A SG CYS 279 A CYS 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? disulf ? disulf9 A SG CYS 278 A CYS 278 1_555 A SG CYS 289 A CYS 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? disulf ? disulf10 A SG CYS 316 A CYS 316 1_555 A SG CYS 361 A CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf11 A SG CYS 360 A CYS 360 1_555 A SG CYS 369 A CYS 369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? disulf ? disulf12 A SG CYS 392 A CYS 392 1_555 A SG CYS 438 A CYS 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf13 A SG CYS 437 A CYS 437 1_555 A SG CYS 448 A CYS 448 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? disulf ? disulf14 A SG CYS 461 A CYS 461 1_555 A SG CYS 477 A CYS 477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf15 A SG CYS 476 A CYS 476 1_555 A SG CYS 487 A CYS 487 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? disulf ? disulf16 A SG CYS 514 A CYS 514 1_555 A SG CYS 559 A CYS 559 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? disulf ? disulf17 A SG CYS 558 A CYS 558 1_555 A SG CYS 567 A CYS 567 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? disulf ? disulf18 B SG CYS 53 B CYS 53 1_555 B SG CYS 62 B CYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? disulf ? disulf19 B SG CYS 75 B CYS 75 1_555 B SG CYS 91 B CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? disulf ? disulf20 B SG CYS 90 B CYS 90 1_555 B SG CYS 101 B CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? disulf ? disulf21 B SG CYS 124 B CYS 124 1_555 B SG CYS 169 B CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? disulf ? disulf22 B SG CYS 168 B CYS 168 1_555 B SG CYS 177 B CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? disulf ? disulf23 B SG CYS 200 B CYS 200 1_555 B SG CYS 246 B CYS 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf24 B SG CYS 245 B CYS 245 1_555 B SG CYS 253 B CYS 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? disulf ? disulf25 B SG CYS 265 B CYS 265 1_555 B SG CYS 279 B CYS 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? disulf ? disulf26 B SG CYS 278 B CYS 278 1_555 B SG CYS 289 B CYS 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? disulf ? disulf27 B SG CYS 316 B CYS 316 1_555 B SG CYS 361 B CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? disulf ? disulf28 B SG CYS 360 B CYS 360 1_555 B SG CYS 369 B CYS 369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? disulf ? disulf29 B SG CYS 392 B CYS 392 1_555 B SG CYS 438 B CYS 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? disulf ? disulf30 B SG CYS 437 B CYS 437 1_555 B SG CYS 448 B CYS 448 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? disulf ? disulf31 B SG CYS 461 B CYS 461 1_555 B SG CYS 477 B CYS 477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf32 B SG CYS 476 B CYS 476 1_555 B SG CYS 487 B CYS 487 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? disulf ? disulf33 B SG CYS 514 B CYS 514 1_555 B SG CYS 559 B CYS 559 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? disulf ? disulf34 B SG CYS 558 B CYS 558 1_555 B SG CYS 567 B CYS 567 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? # _chem_comp.formula 'C19 H16 O4' _chem_comp.formula_weight 308.328 _chem_comp.id RWF _chem_comp.mon_nstd_flag . _chem_comp.name R-WARFARIN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C14 RWF sing 357 n y C1 C15 RWF doub 358 n y C1 C19 RWF sing 359 n y C2 C3 RWF sing 360 n n C2 C6 RWF sing 361 n n C2 C13 RWF sing 362 n n C2 H2 RWF sing 363 n n C3 C4 RWF sing 364 n n C3 H3C1 RWF sing 365 n n C3 H3C2 RWF sing 366 n n C4 C5 RWF sing 367 n n C4 O3 RWF doub 368 n n C5 H5C1 RWF sing 369 n n C5 H5C2 RWF sing 370 n n C5 H5C3 RWF sing 371 n n C6 C7 RWF doub 372 n y C6 C12 RWF sing 373 n y C7 C8 RWF sing 374 n y C7 H7 RWF sing 375 n n C8 C9 RWF doub 376 n y C8 H8 RWF sing 377 n n C9 C10 RWF sing 378 n y C9 H9 RWF sing 379 n n C10 C12 RWF doub 380 n y C10 H10 RWF sing 381 n n C11 C13 RWF sing 382 n y C11 O1 RWF sing 383 n y C11 O2 RWF doub 384 n n C12 H12 RWF sing 385 n n C13 C14 RWF doub 386 n y C14 O4 RWF sing 387 n n C15 C16 RWF sing 388 n y C15 H15 RWF sing 389 n n C16 C17 RWF doub 390 n y C16 H16 RWF sing 391 n n C17 C18 RWF sing 392 n y C17 H17 RWF sing 393 n n C18 C19 RWF doub 394 n y C18 H18 RWF sing 395 n n C19 O1 RWF sing 396 n y O4 H4 RWF sing 397 n n # _atom_sites.entry_id 8A9Q _atom_sites.fract_transf_matrix[1][1] 0.026137 _atom_sites.fract_transf_matrix[1][2] -0.004619 _atom_sites.fract_transf_matrix[1][3] 0.00097 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011023 _atom_sites.fract_transf_matrix[2][3] -0.003114 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010876 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MYR A 1 601 601 MYR MYR . D 2 MYR A 1 602 602 MYR MYR . E 2 MYR A 1 603 603 MYR MYR . F 2 MYR A 1 604 604 MYR MYR . G 3 RWF A 1 605 605 RWF RWF . H 2 MYR B 1 601 601 MYR MYR . I 2 MYR B 1 602 602 MYR MYR . J 4 DAO B 1 603 603 DAO DAO . K 2 MYR B 1 604 604 MYR MYR . L 3 RWF B 1 605 605 RWF RWF . M 5 HOH A 1 701 46 HOH HOH . M 5 HOH A 2 702 37 HOH HOH . M 5 HOH A 3 703 25 HOH HOH . M 5 HOH A 4 704 6 HOH HOH . M 5 HOH A 5 705 49 HOH HOH . M 5 HOH A 6 706 22 HOH HOH . M 5 HOH A 7 707 63 HOH HOH . M 5 HOH A 8 708 20 HOH HOH . M 5 HOH A 9 709 62 HOH HOH . M 5 HOH A 10 710 4 HOH HOH . M 5 HOH A 11 711 703 HOH HOH . M 5 HOH A 12 712 701 HOH HOH . M 5 HOH A 13 713 27 HOH HOH . M 5 HOH A 14 714 77 HOH HOH . M 5 HOH A 15 715 71 HOH HOH . M 5 HOH A 16 716 16 HOH HOH . M 5 HOH A 17 717 704 HOH HOH . M 5 HOH A 18 718 84 HOH HOH . M 5 HOH A 19 719 702 HOH HOH . M 5 HOH A 20 720 11 HOH HOH . M 5 HOH A 21 721 57 HOH HOH . M 5 HOH A 22 722 58 HOH HOH . M 5 HOH A 23 723 705 HOH HOH . M 5 HOH A 24 724 78 HOH HOH . M 5 HOH A 25 725 48 HOH HOH . M 5 HOH A 26 726 30 HOH HOH . M 5 HOH A 27 727 28 HOH HOH . M 5 HOH A 28 728 24 HOH HOH . M 5 HOH A 29 729 9 HOH HOH . M 5 HOH A 30 730 42 HOH HOH . M 5 HOH A 31 731 41 HOH HOH . M 5 HOH A 32 732 39 HOH HOH . M 5 HOH A 33 733 29 HOH HOH . M 5 HOH A 34 734 26 HOH HOH . M 5 HOH A 35 735 21 HOH HOH . M 5 HOH A 36 736 69 HOH HOH . M 5 HOH A 37 737 80 HOH HOH . M 5 HOH A 38 738 73 HOH HOH . M 5 HOH A 39 739 15 HOH HOH . M 5 HOH A 40 740 31 HOH HOH . M 5 HOH A 41 741 5 HOH HOH . M 5 HOH A 42 742 87 HOH HOH . M 5 HOH A 43 743 75 HOH HOH . M 5 HOH A 44 744 34 HOH HOH . M 5 HOH A 45 745 3 HOH HOH . M 5 HOH A 46 746 83 HOH HOH . M 5 HOH A 47 747 706 HOH HOH . M 5 HOH A 48 748 7 HOH HOH . M 5 HOH A 49 749 59 HOH HOH . M 5 HOH A 50 750 88 HOH HOH . M 5 HOH A 51 751 85 HOH HOH . M 5 HOH A 52 752 32 HOH HOH . N 5 HOH B 1 701 74 HOH HOH . N 5 HOH B 2 702 701 HOH HOH . N 5 HOH B 3 703 12 HOH HOH . N 5 HOH B 4 704 33 HOH HOH . N 5 HOH B 5 705 35 HOH HOH . N 5 HOH B 6 706 45 HOH HOH . N 5 HOH B 7 707 38 HOH HOH . N 5 HOH B 8 708 702 HOH HOH . N 5 HOH B 9 709 43 HOH HOH . N 5 HOH B 10 710 81 HOH HOH . N 5 HOH B 11 711 65 HOH HOH . N 5 HOH B 12 712 13 HOH HOH . N 5 HOH B 13 713 66 HOH HOH . N 5 HOH B 14 714 61 HOH HOH . N 5 HOH B 15 715 40 HOH HOH . N 5 HOH B 16 716 703 HOH HOH . N 5 HOH B 17 717 23 HOH HOH . N 5 HOH B 18 718 86 HOH HOH . N 5 HOH B 19 719 79 HOH HOH . N 5 HOH B 20 720 704 HOH HOH . N 5 HOH B 21 721 51 HOH HOH . N 5 HOH B 22 722 68 HOH HOH . N 5 HOH B 23 723 53 HOH HOH . N 5 HOH B 24 724 705 HOH HOH . N 5 HOH B 25 725 67 HOH HOH . N 5 HOH B 26 726 54 HOH HOH . N 5 HOH B 27 727 72 HOH HOH . N 5 HOH B 28 728 47 HOH HOH . N 5 HOH B 29 729 55 HOH HOH . N 5 HOH B 30 730 36 HOH HOH . N 5 HOH B 31 731 64 HOH HOH . N 5 HOH B 32 732 56 HOH HOH . N 5 HOH B 33 733 52 HOH HOH . N 5 HOH B 34 734 19 HOH HOH . N 5 HOH B 35 735 17 HOH HOH . N 5 HOH B 36 736 706 HOH HOH . N 5 HOH B 37 737 82 HOH HOH . N 5 HOH B 38 738 10 HOH HOH . N 5 HOH B 39 739 8 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 RWF . . . G 3 -7.462 -48.133 -37.341 1 68.21 ? C1 RWF 605 A 1 HETATM 2 C C2 RWF . . . G 3 -7.748 -44.345 -37.42 1 67.86 ? C2 RWF 605 A 1 HETATM 3 C C3 RWF . . . G 3 -7.605 -43.815 -36.015 1 73.64 ? C3 RWF 605 A 1 HETATM 4 C C4 RWF . . . G 3 -7.213 -42.299 -36.152 1 79.96 ? C4 RWF 605 A 1 HETATM 5 C C5 RWF . . . G 3 -7.95 -41.445 -35.111 1 77.89 ? C5 RWF 605 A 1 HETATM 6 C C6 RWF . . . G 3 -9.038 -44.057 -37.948 1 66.71 ? C6 RWF 605 A 1 HETATM 7 C C7 RWF . . . G 3 -9.15 -43.174 -39.008 1 69.76 ? C7 RWF 605 A 1 HETATM 8 C C8 RWF . . . G 3 -10.376 -42.861 -39.582 1 73.23 ? C8 RWF 605 A 1 HETATM 9 C C9 RWF . . . G 3 -11.544 -43.399 -39.117 1 66.15 ? C9 RWF 605 A 1 HETATM 10 C C10 RWF . . . G 3 -11.414 -44.294 -38.093 1 60.6 ? C10 RWF 605 A 1 HETATM 11 C C11 RWF . . . G 3 -6.419 -45.853 -38.669 1 62.65 ? C11 RWF 605 A 1 HETATM 12 C C12 RWF . . . G 3 -10.208 -44.615 -37.495 1 58.84 ? C12 RWF 605 A 1 HETATM 13 C C13 RWF . . . G 3 -7.36 -45.691 -37.633 1 69.42 ? C13 RWF 605 A 1 HETATM 14 C C14 RWF . . . G 3 -7.898 -46.85 -37.002 1 72.47 ? C14 RWF 605 A 1 HETATM 15 C C15 RWF . . . G 3 -7.976 -49.254 -36.669 1 59.26 ? C15 RWF 605 A 1 HETATM 16 C C16 RWF . . . G 3 -7.533 -50.518 -37.033 1 57.16 ? C16 RWF 605 A 1 HETATM 17 C C17 RWF . . . G 3 -6.566 -50.697 -38.029 1 60.39 ? C17 RWF 605 A 1 HETATM 18 C C18 RWF . . . G 3 -6.037 -49.565 -38.692 1 61.15 ? C18 RWF 605 A 1 HETATM 19 C C19 RWF . . . G 3 -6.49 -48.268 -38.376 1 65.74 ? C19 RWF 605 A 1 HETATM 20 O O1 RWF . . . G 3 -5.991 -47.102 -39.03 1 62.8 ? O1 RWF 605 A 1 HETATM 21 O O2 RWF . . . G 3 -5.958 -44.869 -39.191 1 64.58 ? O2 RWF 605 A 1 HETATM 22 O O3 RWF . . . G 3 -7.478 -41.761 -37.486 1 75.02 ? O3 RWF 605 A 1 HETATM 23 O O4 RWF . . . G 3 -8.805 -46.789 -35.979 1 82.61 ? O4 RWF 605 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 47 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 23 #