data_8AAO
#
_model_server_result.job_id            K7qTJBZetMlokz_VWe6vuw 
_model_server_result.datetime_utc      '2025-06-29 10:38:32' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8aao 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":301}' 
#
_entry.id    8AAO 
#
_exptl.entry_id    8AAO 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              488.507 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2~{S})-2-[[(2~{S})-3-[4-(5-ethanoyl-2-fluoranyl-phenyl)phenyl]-2-(3-oxidanylidene-1~{H}-isoindol-2-yl)propanoyl]amino]propanoic acid' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          120.55 
_cell.angle_gamma         90 
_cell.entry_id            8AAO 
_cell.length_a            102.206 
_cell.length_b            48.257 
_cell.length_c            74.942 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8AAO 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C28 H25 F N2 O5' 
_chem_comp.formula_weight    488.507 
_chem_comp.id                LN2 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2~{S})-2-[[(2~{S})-3-[4-(5-ethanoyl-2-fluoranyl-phenyl)phenyl]-2-(3-oxidanylidene-1~{H}-isoindol-2-yl)propanoyl]amino]propanoic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C21 C20 LN2 doub 194 n y 
C21 C22 LN2 sing 195 n y 
C20 C19 LN2 sing 196 n y 
C22 C23 LN2 doub 197 n y 
C19 C18 LN2 doub 198 n y 
C23 C18 LN2 sing 199 n y 
C23 C24 LN2 sing 200 n n 
C18 C17 LN2 sing 201 n n 
C24 O4 LN2 doub 202 n n 
C24 N1 LN2 sing 203 n n 
C17 N1 LN2 sing 204 n n 
N1 C12 LN2 sing 205 n n 
C11 C12 LN2 sing 206 n n 
C11 C10 LN2 sing 207 n n 
C12 C13 LN2 sing 208 n n 
C10 C25 LN2 doub 209 n y 
C10 C9 LN2 sing 210 n y 
C25 C26 LN2 sing 211 n y 
C13 O1 LN2 doub 212 n n 
C13 N LN2 sing 213 n n 
C9 C8 LN2 doub 214 n y 
C26 C7 LN2 doub 215 n y 
F C5 LN2 sing 216 n n 
N C14 LN2 sing 217 n n 
C8 C7 LN2 sing 218 n y 
C7 C6 LN2 sing 219 n n 
C5 C6 LN2 doub 220 n y 
C5 C4 LN2 sing 221 n y 
C6 C27 LN2 sing 222 n y 
C14 C15 LN2 sing 223 n n 
C14 C16 LN2 sing 224 n n 
C4 C3 LN2 doub 225 n y 
C16 O3 LN2 doub 226 n n 
C16 O2 LN2 sing 227 n n 
C27 C2 LN2 doub 228 n y 
C3 C2 LN2 sing 229 n y 
C2 C1 LN2 sing 230 n n 
C1 O LN2 doub 231 n n 
C1 C LN2 sing 232 n n 
O2 H1 LN2 sing 233 n n 
C22 H2 LN2 sing 234 n n 
C21 H3 LN2 sing 235 n n 
C20 H4 LN2 sing 236 n n 
C19 H5 LN2 sing 237 n n 
C17 H6 LN2 sing 238 n n 
C17 H7 LN2 sing 239 n n 
C12 H8 LN2 sing 240 n n 
N H9 LN2 sing 241 n n 
C14 H10 LN2 sing 242 n n 
C15 H11 LN2 sing 243 n n 
C15 H12 LN2 sing 244 n n 
C15 H13 LN2 sing 245 n n 
C11 H14 LN2 sing 246 n n 
C11 H15 LN2 sing 247 n n 
C9 H16 LN2 sing 248 n n 
C8 H17 LN2 sing 249 n n 
C25 H18 LN2 sing 250 n n 
C26 H19 LN2 sing 251 n n 
C4 H20 LN2 sing 252 n n 
C3 H21 LN2 sing 253 n n 
C27 H22 LN2 sing 254 n n 
C H23 LN2 sing 255 n n 
C H24 LN2 sing 256 n n 
C H25 LN2 sing 257 n n 
#
_atom_sites.entry_id                     8AAO 
_atom_sites.fract_transf_matrix[1][1]    0.009784 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.005775 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.020722 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015495 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 LN2 A 1 301 301 LN2 543 . 
D 2 LN2 B 1 301 301 LN2 543 . 
E 3 HOH A 1 401 20 HOH HOH . 
E 3 HOH A 2 402 108 HOH HOH . 
E 3 HOH A 3 403 117 HOH HOH . 
E 3 HOH A 4 404 107 HOH HOH . 
E 3 HOH A 5 405 37 HOH HOH . 
E 3 HOH A 6 406 75 HOH HOH . 
E 3 HOH A 7 407 87 HOH HOH . 
E 3 HOH A 8 408 44 HOH HOH . 
E 3 HOH A 9 409 53 HOH HOH . 
E 3 HOH A 10 410 97 HOH HOH . 
E 3 HOH A 11 411 31 HOH HOH . 
E 3 HOH A 12 412 125 HOH HOH . 
E 3 HOH A 13 413 122 HOH HOH . 
E 3 HOH A 14 414 43 HOH HOH . 
E 3 HOH A 15 415 12 HOH HOH . 
E 3 HOH A 16 416 50 HOH HOH . 
E 3 HOH A 17 417 67 HOH HOH . 
E 3 HOH A 18 418 105 HOH HOH . 
E 3 HOH A 19 419 121 HOH HOH . 
E 3 HOH A 20 420 90 HOH HOH . 
E 3 HOH A 21 421 127 HOH HOH . 
F 3 HOH B 1 401 129 HOH HOH . 
F 3 HOH B 2 402 110 HOH HOH . 
F 3 HOH B 3 403 89 HOH HOH . 
F 3 HOH B 4 404 79 HOH HOH . 
F 3 HOH B 5 405 124 HOH HOH . 
F 3 HOH B 6 406 73 HOH HOH . 
F 3 HOH B 7 407 123 HOH HOH . 
F 3 HOH B 8 408 131 HOH HOH . 
F 3 HOH B 9 409 96 HOH HOH . 
F 3 HOH B 10 410 99 HOH HOH . 
F 3 HOH B 11 411 113 HOH HOH . 
F 3 HOH B 12 412 128 HOH HOH . 
F 3 HOH B 13 413 40 HOH HOH . 
F 3 HOH B 14 414 81 HOH HOH . 
F 3 HOH B 15 415 91 HOH HOH . 
F 3 HOH B 16 416 52 HOH HOH . 
F 3 HOH B 17 417 102 HOH HOH . 
F 3 HOH B 18 418 115 HOH HOH . 
F 3 HOH B 19 419 48 HOH HOH . 
F 3 HOH B 20 420 28 HOH HOH . 
F 3 HOH B 21 421 103 HOH HOH . 
F 3 HOH B 22 422 65 HOH HOH . 
F 3 HOH B 23 423 78 HOH HOH . 
F 3 HOH B 24 424 104 HOH HOH . 
F 3 HOH B 25 425 64 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1 LN2 . . . D 2 46.154 10.438 17.77 0.83 57.19 ? O1 LN2 301 B 1 
HETATM 2 O O2 LN2 . . . D 2 45.575 7.145 19.394 0.83 60.01 ? O2 LN2 301 B 1 
HETATM 3 O O3 LN2 . . . D 2 44.524 6.788 17.465 0.83 59.67 ? O3 LN2 301 B 1 
HETATM 4 O O4 LN2 . . . D 2 43.323 11.97 13.865 0.83 52.87 ? O4 LN2 301 B 1 
HETATM 5 C C1 LN2 . . . D 2 47.916 1.776 15.591 0.83 64.72 ? C1 LN2 301 B 1 
HETATM 6 C C2 LN2 . . . D 2 48.542 2.859 14.786 0.83 63.61 ? C2 LN2 301 B 1 
HETATM 7 O O LN2 . . . D 2 47.169 2.053 16.512 0.83 65.15 ? O LN2 301 B 1 
HETATM 8 C C24 LN2 . . . D 2 43.911 12.644 14.691 0.83 53.04 ? C24 LN2 301 B 1 
HETATM 9 C C23 LN2 . . . D 2 43.834 14.104 14.925 0.83 52.16 ? C23 LN2 301 B 1 
HETATM 10 C C22 LN2 . . . D 2 43.18 15.107 14.21 0.83 51.61 ? C22 LN2 301 B 1 
HETATM 11 C C21 LN2 . . . D 2 43.339 16.431 14.598 0.83 51.07 ? C21 LN2 301 B 1 
HETATM 12 C C20 LN2 . . . D 2 44.112 16.75 15.696 0.83 50.95 ? C20 LN2 301 B 1 
HETATM 13 C C19 LN2 . . . D 2 44.756 15.751 16.408 0.83 51.56 ? C19 LN2 301 B 1 
HETATM 14 C C18 LN2 . . . D 2 44.628 14.423 16.014 0.83 52.13 ? C18 LN2 301 B 1 
HETATM 15 C C17 LN2 . . . D 2 45.295 13.181 16.526 0.83 52.6 ? C17 LN2 301 B 1 
HETATM 16 N N1 LN2 . . . D 2 44.793 12.158 15.603 0.83 53.97 ? N1 LN2 301 B 1 
HETATM 17 C C12 LN2 . . . D 2 45.246 10.775 15.576 0.83 55.74 ? C12 LN2 301 B 1 
HETATM 18 C C13 LN2 . . . D 2 45.211 10.261 17.009 0.83 56.69 ? C13 LN2 301 B 1 
HETATM 19 N N LN2 . . . D 2 44.122 9.579 17.355 0.83 57.81 ? N LN2 301 B 1 
HETATM 20 C C14 LN2 . . . D 2 44.073 8.833 18.6 0.83 59.01 ? C14 LN2 301 B 1 
HETATM 21 C C16 LN2 . . . D 2 44.813 7.508 18.516 0.83 59.57 ? C16 LN2 301 B 1 
HETATM 22 C C15 LN2 . . . D 2 42.636 8.598 19.023 0.83 59.38 ? C15 LN2 301 B 1 
HETATM 23 C C11 LN2 . . . D 2 46.632 10.63 14.916 0.83 56.91 ? C11 LN2 301 B 1 
HETATM 24 C C10 LN2 . . . D 2 47.15 9.221 14.741 0.83 58.42 ? C10 LN2 301 B 1 
HETATM 25 C C9 LN2 . . . D 2 46.288 8.132 14.717 0.83 59.17 ? C9 LN2 301 B 1 
HETATM 26 C C8 LN2 . . . D 2 46.77 6.845 14.553 0.83 59.68 ? C8 LN2 301 B 1 
HETATM 27 C C25 LN2 . . . D 2 48.507 8.981 14.597 0.83 58.86 ? C25 LN2 301 B 1 
HETATM 28 C C26 LN2 . . . D 2 48.99 7.697 14.428 0.83 59.52 ? C26 LN2 301 B 1 
HETATM 29 C C7 LN2 . . . D 2 48.133 6.6 14.399 0.83 60.23 ? C7 LN2 301 B 1 
HETATM 30 C C6 LN2 . . . D 2 48.653 5.215 14.206 0.83 61.87 ? C6 LN2 301 B 1 
HETATM 31 C C5 LN2 . . . D 2 49.681 4.892 13.327 0.83 62.62 ? C5 LN2 301 B 1 
HETATM 32 F F LN2 . . . D 2 50.223 5.867 12.567 0.83 63.05 ? F LN2 301 B 1 
HETATM 33 C C4 LN2 . . . D 2 50.151 3.612 13.162 0.83 63.01 ? C4 LN2 301 B 1 
HETATM 34 C C3 LN2 . . . D 2 49.574 2.591 13.894 0.83 63.21 ? C3 LN2 301 B 1 
HETATM 35 C C27 LN2 . . . D 2 48.084 4.168 14.933 0.83 62.96 ? C27 LN2 301 B 1 
HETATM 36 C C LN2 . . . D 2 48.215 0.347 15.257 0.83 65.3 ? C LN2 301 B 1 
#
_model_server_stats.io_time_ms              49 
_model_server_stats.parse_time_ms           25 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           334 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           36 
#