data_8AAU # _model_server_result.job_id Dbmm_BNgxZcpx7iyWp2CTQ _model_server_result.datetime_utc '2024-10-10 23:36:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8aau # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":701}' # _entry.id 8AAU # _exptl.entry_id 8AAU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8AAU _cell.length_a 85.668 _cell.length_b 85.668 _cell.length_c 182.108 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8AAU _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall 'P 61 2 (x,y,z+5/12)' _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 133 L ASP 460 1_555 G MG MG . L MG 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? metalc ? metalc2 A OD2 ASP 151 L ASP 478 1_555 G MG MG . L MG 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? metalc ? metalc3 G MG MG . L MG 706 1_555 H O HOH . L HOH 822 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? metalc ? metalc4 G MG MG . L MG 706 1_555 H O HOH . L HOH 869 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? metalc ? metalc5 G MG MG . L MG 706 1_555 H O HOH . L HOH 875 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? metalc ? metalc6 G MG MG . L MG 706 1_555 H O HOH . L HOH 883 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 8AAU _atom_sites.fract_transf_matrix[1][1] 0.011673 _atom_sites.fract_transf_matrix[1][2] 0.006739 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013479 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005491 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO L 1 701 701 EDO EDO . C 3 LH0 L 1 702 1 LH0 LI3 . D 4 SO4 L 1 703 1 SO4 SO4 . E 4 SO4 L 1 704 2 SO4 SO4 . F 4 SO4 L 1 705 3 SO4 SO4 . G 5 MG L 1 706 1 MG MG . H 6 HOH L 1 801 27 HOH HOH . H 6 HOH L 2 802 58 HOH HOH . H 6 HOH L 3 803 9 HOH HOH . H 6 HOH L 4 804 17 HOH HOH . H 6 HOH L 5 805 44 HOH HOH . H 6 HOH L 6 806 88 HOH HOH . H 6 HOH L 7 807 43 HOH HOH . H 6 HOH L 8 808 69 HOH HOH . H 6 HOH L 9 809 57 HOH HOH . H 6 HOH L 10 810 21 HOH HOH . H 6 HOH L 11 811 59 HOH HOH . H 6 HOH L 12 812 34 HOH HOH . H 6 HOH L 13 813 30 HOH HOH . H 6 HOH L 14 814 23 HOH HOH . H 6 HOH L 15 815 48 HOH HOH . H 6 HOH L 16 816 72 HOH HOH . H 6 HOH L 17 817 61 HOH HOH . H 6 HOH L 18 818 37 HOH HOH . H 6 HOH L 19 819 6 HOH HOH . H 6 HOH L 20 820 73 HOH HOH . H 6 HOH L 21 821 29 HOH HOH . H 6 HOH L 22 822 75 HOH HOH . H 6 HOH L 23 823 70 HOH HOH . H 6 HOH L 24 824 97 HOH HOH . H 6 HOH L 25 825 14 HOH HOH . H 6 HOH L 26 826 87 HOH HOH . H 6 HOH L 27 827 7 HOH HOH . H 6 HOH L 28 828 35 HOH HOH . H 6 HOH L 29 829 39 HOH HOH . H 6 HOH L 30 830 83 HOH HOH . H 6 HOH L 31 831 1 HOH HOH . H 6 HOH L 32 832 51 HOH HOH . H 6 HOH L 33 833 41 HOH HOH . H 6 HOH L 34 834 32 HOH HOH . H 6 HOH L 35 835 3 HOH HOH . H 6 HOH L 36 836 16 HOH HOH . H 6 HOH L 37 837 28 HOH HOH . H 6 HOH L 38 838 53 HOH HOH . H 6 HOH L 39 839 8 HOH HOH . H 6 HOH L 40 840 89 HOH HOH . H 6 HOH L 41 841 85 HOH HOH . H 6 HOH L 42 842 22 HOH HOH . H 6 HOH L 43 843 86 HOH HOH . H 6 HOH L 44 844 36 HOH HOH . H 6 HOH L 45 845 18 HOH HOH . H 6 HOH L 46 846 84 HOH HOH . H 6 HOH L 47 847 15 HOH HOH . H 6 HOH L 48 848 94 HOH HOH . H 6 HOH L 49 849 25 HOH HOH . H 6 HOH L 50 850 5 HOH HOH . H 6 HOH L 51 851 46 HOH HOH . H 6 HOH L 52 852 91 HOH HOH . H 6 HOH L 53 853 10 HOH HOH . H 6 HOH L 54 854 63 HOH HOH . H 6 HOH L 55 855 56 HOH HOH . H 6 HOH L 56 856 54 HOH HOH . H 6 HOH L 57 857 24 HOH HOH . H 6 HOH L 58 858 33 HOH HOH . H 6 HOH L 59 859 4 HOH HOH . H 6 HOH L 60 860 40 HOH HOH . H 6 HOH L 61 861 31 HOH HOH . H 6 HOH L 62 862 12 HOH HOH . H 6 HOH L 63 863 50 HOH HOH . H 6 HOH L 64 864 79 HOH HOH . H 6 HOH L 65 865 62 HOH HOH . H 6 HOH L 66 866 67 HOH HOH . H 6 HOH L 67 867 98 HOH HOH . H 6 HOH L 68 868 2 HOH HOH . H 6 HOH L 69 869 76 HOH HOH . H 6 HOH L 70 870 80 HOH HOH . H 6 HOH L 71 871 68 HOH HOH . H 6 HOH L 72 872 55 HOH HOH . H 6 HOH L 73 873 81 HOH HOH . H 6 HOH L 74 874 20 HOH HOH . H 6 HOH L 75 875 77 HOH HOH . H 6 HOH L 76 876 93 HOH HOH . H 6 HOH L 77 877 60 HOH HOH . H 6 HOH L 78 878 38 HOH HOH . H 6 HOH L 79 879 90 HOH HOH . H 6 HOH L 80 880 49 HOH HOH . H 6 HOH L 81 881 11 HOH HOH . H 6 HOH L 82 882 19 HOH HOH . H 6 HOH L 83 883 78 HOH HOH . H 6 HOH L 84 884 52 HOH HOH . H 6 HOH L 85 885 45 HOH HOH . H 6 HOH L 86 886 82 HOH HOH . H 6 HOH L 87 887 99 HOH HOH . H 6 HOH L 88 888 13 HOH HOH . H 6 HOH L 89 889 47 HOH HOH . H 6 HOH L 90 890 92 HOH HOH . H 6 HOH L 91 891 95 HOH HOH . H 6 HOH L 92 892 96 HOH HOH . H 6 HOH L 93 893 66 HOH HOH . H 6 HOH L 94 894 65 HOH HOH . H 6 HOH L 95 895 26 HOH HOH . H 6 HOH L 96 896 42 HOH HOH . H 6 HOH L 97 897 74 HOH HOH . H 6 HOH L 98 898 64 HOH HOH . H 6 HOH L 99 899 71 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . B 2 14.625 40.193 -9.387 1 51.82 ? C1 EDO 701 L 1 HETATM 2 O O1 EDO . . . B 2 14.351 41.291 -8.504 1 50.33 ? O1 EDO 701 L 1 HETATM 3 C C2 EDO . . . B 2 13.709 40.269 -10.61 1 54.41 ? C2 EDO 701 L 1 HETATM 4 O O2 EDO . . . B 2 13.699 39.012 -11.31 1 56.67 ? O2 EDO 701 L 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 263 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #