data_8ABO # _model_server_result.job_id UT2PfkN16_uKKDlJYJdTug _model_server_result.datetime_utc '2024-11-15 09:39:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8abo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":404}' # _entry.id 8ABO # _exptl.entry_id 8ABO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.005 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITRATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8ABO _cell.length_a 78.08 _cell.length_b 104.425 _cell.length_c 104.688 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8ABO _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall 'C 2c 2' _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 351 A CYS 350 1_555 C FE HEM . A HEM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.135 ? metalc ? metalc2 B NAJ 231 . A 231 401 1_555 C FE HEM . A HEM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? # _chem_comp.formula 'N O3 -1' _chem_comp.formula_weight 62.005 _chem_comp.id NO3 _chem_comp.mon_nstd_flag . _chem_comp.name 'NITRATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N O1 NO3 doub 339 n n N O2 NO3 sing 340 n n N O3 NO3 sing 341 n n # _atom_sites.entry_id 8ABO _atom_sites.fract_transf_matrix[1][1] 0.012807 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009576 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009552 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 231 A 1 401 600 231 OEE . C 3 HEM A 1 402 700 HEM HEM . D 4 NO3 A 1 403 702 NO3 NO3 . E 4 NO3 A 1 404 703 NO3 NO3 . F 5 HOH A 1 501 67 HOH HOH . F 5 HOH A 2 502 28 HOH HOH . F 5 HOH A 3 503 80 HOH HOH . F 5 HOH A 4 504 130 HOH HOH . F 5 HOH A 5 505 200 HOH HOH . F 5 HOH A 6 506 66 HOH HOH . F 5 HOH A 7 507 183 HOH HOH . F 5 HOH A 8 508 140 HOH HOH . F 5 HOH A 9 509 40 HOH HOH . F 5 HOH A 10 510 185 HOH HOH . F 5 HOH A 11 511 226 HOH HOH . F 5 HOH A 12 512 213 HOH HOH . F 5 HOH A 13 513 84 HOH HOH . F 5 HOH A 14 514 218 HOH HOH . F 5 HOH A 15 515 68 HOH HOH . F 5 HOH A 16 516 71 HOH HOH . F 5 HOH A 17 517 14 HOH HOH . F 5 HOH A 18 518 45 HOH HOH . F 5 HOH A 19 519 118 HOH HOH . F 5 HOH A 20 520 231 HOH HOH . F 5 HOH A 21 521 90 HOH HOH . F 5 HOH A 22 522 198 HOH HOH . F 5 HOH A 23 523 36 HOH HOH . F 5 HOH A 24 524 134 HOH HOH . F 5 HOH A 25 525 240 HOH HOH . F 5 HOH A 26 526 101 HOH HOH . F 5 HOH A 27 527 81 HOH HOH . F 5 HOH A 28 528 156 HOH HOH . F 5 HOH A 29 529 11 HOH HOH . F 5 HOH A 30 530 176 HOH HOH . F 5 HOH A 31 531 12 HOH HOH . F 5 HOH A 32 532 141 HOH HOH . F 5 HOH A 33 533 112 HOH HOH . F 5 HOH A 34 534 8 HOH HOH . F 5 HOH A 35 535 95 HOH HOH . F 5 HOH A 36 536 43 HOH HOH . F 5 HOH A 37 537 114 HOH HOH . F 5 HOH A 38 538 117 HOH HOH . F 5 HOH A 39 539 103 HOH HOH . F 5 HOH A 40 540 206 HOH HOH . F 5 HOH A 41 541 75 HOH HOH . F 5 HOH A 42 542 31 HOH HOH . F 5 HOH A 43 543 223 HOH HOH . F 5 HOH A 44 544 192 HOH HOH . F 5 HOH A 45 545 26 HOH HOH . F 5 HOH A 46 546 143 HOH HOH . F 5 HOH A 47 547 37 HOH HOH . F 5 HOH A 48 548 159 HOH HOH . F 5 HOH A 49 549 184 HOH HOH . F 5 HOH A 50 550 230 HOH HOH . F 5 HOH A 51 551 144 HOH HOH . F 5 HOH A 52 552 108 HOH HOH . F 5 HOH A 53 553 99 HOH HOH . F 5 HOH A 54 554 77 HOH HOH . F 5 HOH A 55 555 201 HOH HOH . F 5 HOH A 56 556 76 HOH HOH . F 5 HOH A 57 557 25 HOH HOH . F 5 HOH A 58 558 177 HOH HOH . F 5 HOH A 59 559 16 HOH HOH . F 5 HOH A 60 560 5 HOH HOH . F 5 HOH A 61 561 49 HOH HOH . F 5 HOH A 62 562 189 HOH HOH . F 5 HOH A 63 563 92 HOH HOH . F 5 HOH A 64 564 125 HOH HOH . F 5 HOH A 65 565 41 HOH HOH . F 5 HOH A 66 566 161 HOH HOH . F 5 HOH A 67 567 2 HOH HOH . F 5 HOH A 68 568 56 HOH HOH . F 5 HOH A 69 569 110 HOH HOH . F 5 HOH A 70 570 63 HOH HOH . F 5 HOH A 71 571 178 HOH HOH . F 5 HOH A 72 572 19 HOH HOH . F 5 HOH A 73 573 33 HOH HOH . F 5 HOH A 74 574 57 HOH HOH . F 5 HOH A 75 575 174 HOH HOH . F 5 HOH A 76 576 152 HOH HOH . F 5 HOH A 77 577 20 HOH HOH . F 5 HOH A 78 578 122 HOH HOH . F 5 HOH A 79 579 22 HOH HOH . F 5 HOH A 80 580 150 HOH HOH . F 5 HOH A 81 581 38 HOH HOH . F 5 HOH A 82 582 3 HOH HOH . F 5 HOH A 83 583 1 HOH HOH . F 5 HOH A 84 584 154 HOH HOH . F 5 HOH A 85 585 23 HOH HOH . F 5 HOH A 86 586 121 HOH HOH . F 5 HOH A 87 587 115 HOH HOH . F 5 HOH A 88 588 4 HOH HOH . F 5 HOH A 89 589 39 HOH HOH . F 5 HOH A 90 590 74 HOH HOH . F 5 HOH A 91 591 187 HOH HOH . F 5 HOH A 92 592 17 HOH HOH . F 5 HOH A 93 593 65 HOH HOH . F 5 HOH A 94 594 186 HOH HOH . F 5 HOH A 95 595 51 HOH HOH . F 5 HOH A 96 596 227 HOH HOH . F 5 HOH A 97 597 50 HOH HOH . F 5 HOH A 98 598 24 HOH HOH . F 5 HOH A 99 599 87 HOH HOH . F 5 HOH A 100 600 194 HOH HOH . F 5 HOH A 101 601 124 HOH HOH . F 5 HOH A 102 602 179 HOH HOH . F 5 HOH A 103 603 145 HOH HOH . F 5 HOH A 104 604 123 HOH HOH . F 5 HOH A 105 605 78 HOH HOH . F 5 HOH A 106 606 13 HOH HOH . F 5 HOH A 107 607 138 HOH HOH . F 5 HOH A 108 608 7 HOH HOH . F 5 HOH A 109 609 182 HOH HOH . F 5 HOH A 110 610 47 HOH HOH . F 5 HOH A 111 611 97 HOH HOH . F 5 HOH A 112 612 6 HOH HOH . F 5 HOH A 113 613 160 HOH HOH . F 5 HOH A 114 614 96 HOH HOH . F 5 HOH A 115 615 69 HOH HOH . F 5 HOH A 116 616 167 HOH HOH . F 5 HOH A 117 617 15 HOH HOH . F 5 HOH A 118 618 107 HOH HOH . F 5 HOH A 119 619 109 HOH HOH . F 5 HOH A 120 620 58 HOH HOH . F 5 HOH A 121 621 21 HOH HOH . F 5 HOH A 122 622 29 HOH HOH . F 5 HOH A 123 623 105 HOH HOH . F 5 HOH A 124 624 129 HOH HOH . F 5 HOH A 125 625 34 HOH HOH . F 5 HOH A 126 626 70 HOH HOH . F 5 HOH A 127 627 86 HOH HOH . F 5 HOH A 128 628 195 HOH HOH . F 5 HOH A 129 629 79 HOH HOH . F 5 HOH A 130 630 48 HOH HOH . F 5 HOH A 131 631 46 HOH HOH . F 5 HOH A 132 632 89 HOH HOH . F 5 HOH A 133 633 42 HOH HOH . F 5 HOH A 134 634 120 HOH HOH . F 5 HOH A 135 635 133 HOH HOH . F 5 HOH A 136 636 93 HOH HOH . F 5 HOH A 137 637 52 HOH HOH . F 5 HOH A 138 638 100 HOH HOH . F 5 HOH A 139 639 18 HOH HOH . F 5 HOH A 140 640 180 HOH HOH . F 5 HOH A 141 641 146 HOH HOH . F 5 HOH A 142 642 9 HOH HOH . F 5 HOH A 143 643 102 HOH HOH . F 5 HOH A 144 644 147 HOH HOH . F 5 HOH A 145 645 10 HOH HOH . F 5 HOH A 146 646 157 HOH HOH . F 5 HOH A 147 647 217 HOH HOH . F 5 HOH A 148 648 132 HOH HOH . F 5 HOH A 149 649 211 HOH HOH . F 5 HOH A 150 650 53 HOH HOH . F 5 HOH A 151 651 199 HOH HOH . F 5 HOH A 152 652 139 HOH HOH . F 5 HOH A 153 653 204 HOH HOH . F 5 HOH A 154 654 30 HOH HOH . F 5 HOH A 155 655 128 HOH HOH . F 5 HOH A 156 656 73 HOH HOH . F 5 HOH A 157 657 229 HOH HOH . F 5 HOH A 158 658 171 HOH HOH . F 5 HOH A 159 659 35 HOH HOH . F 5 HOH A 160 660 27 HOH HOH . F 5 HOH A 161 661 242 HOH HOH . F 5 HOH A 162 662 61 HOH HOH . F 5 HOH A 163 663 235 HOH HOH . F 5 HOH A 164 664 111 HOH HOH . F 5 HOH A 165 665 59 HOH HOH . F 5 HOH A 166 666 166 HOH HOH . F 5 HOH A 167 667 241 HOH HOH . F 5 HOH A 168 668 113 HOH HOH . F 5 HOH A 169 669 88 HOH HOH . F 5 HOH A 170 670 162 HOH HOH . F 5 HOH A 171 671 215 HOH HOH . F 5 HOH A 172 672 148 HOH HOH . F 5 HOH A 173 673 32 HOH HOH . F 5 HOH A 174 674 221 HOH HOH . F 5 HOH A 175 675 98 HOH HOH . F 5 HOH A 176 676 131 HOH HOH . F 5 HOH A 177 677 62 HOH HOH . F 5 HOH A 178 678 54 HOH HOH . F 5 HOH A 179 679 44 HOH HOH . F 5 HOH A 180 680 207 HOH HOH . F 5 HOH A 181 681 55 HOH HOH . F 5 HOH A 182 682 232 HOH HOH . F 5 HOH A 183 683 188 HOH HOH . F 5 HOH A 184 684 224 HOH HOH . F 5 HOH A 185 685 94 HOH HOH . F 5 HOH A 186 686 193 HOH HOH . F 5 HOH A 187 687 163 HOH HOH . F 5 HOH A 188 688 210 HOH HOH . F 5 HOH A 189 689 191 HOH HOH . F 5 HOH A 190 690 209 HOH HOH . F 5 HOH A 191 691 104 HOH HOH . F 5 HOH A 192 692 225 HOH HOH . F 5 HOH A 193 693 170 HOH HOH . F 5 HOH A 194 694 216 HOH HOH . F 5 HOH A 195 695 175 HOH HOH . F 5 HOH A 196 696 168 HOH HOH . F 5 HOH A 197 697 197 HOH HOH . F 5 HOH A 198 698 106 HOH HOH . F 5 HOH A 199 699 119 HOH HOH . F 5 HOH A 200 700 234 HOH HOH . F 5 HOH A 201 701 165 HOH HOH . F 5 HOH A 202 702 190 HOH HOH . F 5 HOH A 203 703 208 HOH HOH . F 5 HOH A 204 704 236 HOH HOH . F 5 HOH A 205 705 60 HOH HOH . F 5 HOH A 206 706 172 HOH HOH . F 5 HOH A 207 707 82 HOH HOH . F 5 HOH A 208 708 91 HOH HOH . F 5 HOH A 209 709 85 HOH HOH . F 5 HOH A 210 710 243 HOH HOH . F 5 HOH A 211 711 196 HOH HOH . F 5 HOH A 212 712 181 HOH HOH . F 5 HOH A 213 713 214 HOH HOH . F 5 HOH A 214 714 158 HOH HOH . F 5 HOH A 215 715 164 HOH HOH . F 5 HOH A 216 716 205 HOH HOH . F 5 HOH A 217 717 64 HOH HOH . F 5 HOH A 218 718 142 HOH HOH . F 5 HOH A 219 719 220 HOH HOH . F 5 HOH A 220 720 228 HOH HOH . F 5 HOH A 221 721 135 HOH HOH . F 5 HOH A 222 722 72 HOH HOH . F 5 HOH A 223 723 116 HOH HOH . F 5 HOH A 224 724 173 HOH HOH . F 5 HOH A 225 725 137 HOH HOH . F 5 HOH A 226 726 212 HOH HOH . F 5 HOH A 227 727 83 HOH HOH . F 5 HOH A 228 728 239 HOH HOH . F 5 HOH A 229 729 126 HOH HOH . F 5 HOH A 230 730 233 HOH HOH . F 5 HOH A 231 731 202 HOH HOH . F 5 HOH A 232 732 222 HOH HOH . F 5 HOH A 233 733 237 HOH HOH . F 5 HOH A 234 734 219 HOH HOH . F 5 HOH A 235 735 136 HOH HOH . F 5 HOH A 236 736 203 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NO3 . . . E 4 -10.38 -32.791 15.484 1 68.22 ? N NO3 404 A 1 HETATM 2 O O1 NO3 . . . E 4 -9.543 -33.084 14.566 1 61.06 ? O1 NO3 404 A 1 HETATM 3 O O2 NO3 . . . E 4 -10.331 -33.344 16.631 1 70.74 ? O2 NO3 404 A 1 HETATM 4 O O3 NO3 . . . E 4 -11.278 -31.927 15.251 1 61.57 ? O3 NO3 404 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #