data_8ABR # _model_server_result.job_id ioXM5w2LdMDDn-ao1-DPSQ _model_server_result.datetime_utc '2025-01-10 08:02:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8abr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 8ABR # _exptl.entry_id 8ABR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 116.158 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEXANOIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8ABR _cell.length_a 78.665 _cell.length_b 78.665 _cell.length_c 188.019 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8ABR _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 351 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 351 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id FE _struct_conn.ptnr2_label_comp_id HEB _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id HEB _struct_conn.ptnr2_auth_seq_id 501 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.242 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C6 H12 O2' _chem_comp.formula_weight 116.158 _chem_comp.id 6NA _chem_comp.mon_nstd_flag . _chem_comp.name 'HEXANOIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CA C 6NA sing 1 n n CA CB 6NA sing 2 n n CA HAC1 6NA sing 3 n n CA HAC2 6NA sing 4 n n C O 6NA doub 5 n n C OXT 6NA sing 6 n n CB CG 6NA sing 7 n n CB HBC1 6NA sing 8 n n CB HBC2 6NA sing 9 n n CG CD 6NA sing 10 n n CG HGC1 6NA sing 11 n n CG HGC2 6NA sing 12 n n CD C6 6NA sing 13 n n CD HDC1 6NA sing 14 n n CD HDC2 6NA sing 15 n n C6 H6C1 6NA sing 16 n n C6 H6C2 6NA sing 17 n n C6 H6C3 6NA sing 18 n n OXT HXT 6NA sing 19 n n # _atom_sites.entry_id 8ABR _atom_sites.fract_transf_matrix[1][1] 0.012712 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012712 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005319 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEB A 1 501 501 HEB HEM . C 3 6NA A 1 502 502 6NA 6NA . D 4 OCA A 1 503 503 OCA OCA . E 5 SO4 A 1 504 1 SO4 SO4 . F 5 SO4 A 1 505 2 SO4 SO4 . G 5 SO4 A 1 506 3 SO4 SO4 . H 5 SO4 A 1 507 4 SO4 SO4 . I 5 SO4 A 1 508 5 SO4 SO4 . J 5 SO4 A 1 509 6 SO4 SO4 . K 6 HOH A 1 601 86 HOH HOH . K 6 HOH A 2 602 24 HOH HOH . K 6 HOH A 3 603 68 HOH HOH . K 6 HOH A 4 604 64 HOH HOH . K 6 HOH A 5 605 40 HOH HOH . K 6 HOH A 6 606 34 HOH HOH . K 6 HOH A 7 607 72 HOH HOH . K 6 HOH A 8 608 28 HOH HOH . K 6 HOH A 9 609 91 HOH HOH . K 6 HOH A 10 610 58 HOH HOH . K 6 HOH A 11 611 55 HOH HOH . K 6 HOH A 12 612 77 HOH HOH . K 6 HOH A 13 613 32 HOH HOH . K 6 HOH A 14 614 13 HOH HOH . K 6 HOH A 15 615 45 HOH HOH . K 6 HOH A 16 616 26 HOH HOH . K 6 HOH A 17 617 39 HOH HOH . K 6 HOH A 18 618 96 HOH HOH . K 6 HOH A 19 619 78 HOH HOH . K 6 HOH A 20 620 6 HOH HOH . K 6 HOH A 21 621 22 HOH HOH . K 6 HOH A 22 622 76 HOH HOH . K 6 HOH A 23 623 35 HOH HOH . K 6 HOH A 24 624 25 HOH HOH . K 6 HOH A 25 625 52 HOH HOH . K 6 HOH A 26 626 93 HOH HOH . K 6 HOH A 27 627 29 HOH HOH . K 6 HOH A 28 628 53 HOH HOH . K 6 HOH A 29 629 84 HOH HOH . K 6 HOH A 30 630 19 HOH HOH . K 6 HOH A 31 631 23 HOH HOH . K 6 HOH A 32 632 81 HOH HOH . K 6 HOH A 33 633 74 HOH HOH . K 6 HOH A 34 634 57 HOH HOH . K 6 HOH A 35 635 30 HOH HOH . K 6 HOH A 36 636 36 HOH HOH . K 6 HOH A 37 637 3 HOH HOH . K 6 HOH A 38 638 48 HOH HOH . K 6 HOH A 39 639 51 HOH HOH . K 6 HOH A 40 640 97 HOH HOH . K 6 HOH A 41 641 31 HOH HOH . K 6 HOH A 42 642 20 HOH HOH . K 6 HOH A 43 643 85 HOH HOH . K 6 HOH A 44 644 71 HOH HOH . K 6 HOH A 45 645 65 HOH HOH . K 6 HOH A 46 646 87 HOH HOH . K 6 HOH A 47 647 27 HOH HOH . K 6 HOH A 48 648 18 HOH HOH . K 6 HOH A 49 649 47 HOH HOH . K 6 HOH A 50 650 49 HOH HOH . K 6 HOH A 51 651 70 HOH HOH . K 6 HOH A 52 652 37 HOH HOH . K 6 HOH A 53 653 38 HOH HOH . K 6 HOH A 54 654 33 HOH HOH . K 6 HOH A 55 655 17 HOH HOH . K 6 HOH A 56 656 59 HOH HOH . K 6 HOH A 57 657 54 HOH HOH . K 6 HOH A 58 658 5 HOH HOH . K 6 HOH A 59 659 9 HOH HOH . K 6 HOH A 60 660 1 HOH HOH . K 6 HOH A 61 661 12 HOH HOH . K 6 HOH A 62 662 16 HOH HOH . K 6 HOH A 63 663 14 HOH HOH . K 6 HOH A 64 664 62 HOH HOH . K 6 HOH A 65 665 67 HOH HOH . K 6 HOH A 66 666 4 HOH HOH . K 6 HOH A 67 667 21 HOH HOH . K 6 HOH A 68 668 80 HOH HOH . K 6 HOH A 69 669 43 HOH HOH . K 6 HOH A 70 670 2 HOH HOH . K 6 HOH A 71 671 7 HOH HOH . K 6 HOH A 72 672 60 HOH HOH . K 6 HOH A 73 673 50 HOH HOH . K 6 HOH A 74 674 66 HOH HOH . K 6 HOH A 75 675 44 HOH HOH . K 6 HOH A 76 676 79 HOH HOH . K 6 HOH A 77 677 15 HOH HOH . K 6 HOH A 78 678 61 HOH HOH . K 6 HOH A 79 679 10 HOH HOH . K 6 HOH A 80 680 83 HOH HOH . K 6 HOH A 81 681 42 HOH HOH . K 6 HOH A 82 682 11 HOH HOH . K 6 HOH A 83 683 94 HOH HOH . K 6 HOH A 84 684 56 HOH HOH . K 6 HOH A 85 685 8 HOH HOH . K 6 HOH A 86 686 88 HOH HOH . K 6 HOH A 87 687 73 HOH HOH . K 6 HOH A 88 688 89 HOH HOH . K 6 HOH A 89 689 90 HOH HOH . K 6 HOH A 90 690 92 HOH HOH . K 6 HOH A 91 691 75 HOH HOH . K 6 HOH A 92 692 63 HOH HOH . K 6 HOH A 93 693 69 HOH HOH . K 6 HOH A 94 694 82 HOH HOH . K 6 HOH A 95 695 41 HOH HOH . K 6 HOH A 96 696 46 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CA 6NA . . . C 3 14.219 -1.984 19.722 1 62.93 ? CA 6NA 502 A 1 HETATM 2 C C 6NA . . . C 3 14.642 -0.674 20.392 1 62.36 ? C 6NA 502 A 1 HETATM 3 O O 6NA . . . C 3 14.933 0.283 19.667 1 59.36 ? O 6NA 502 A 1 HETATM 4 C CB 6NA . . . C 3 13.705 -3.099 20.62 1 59.92 ? CB 6NA 502 A 1 HETATM 5 C CG 6NA . . . C 3 13.151 -4.256 19.797 1 61.18 ? CG 6NA 502 A 1 HETATM 6 C CD 6NA . . . C 3 11.633 -4.331 19.766 1 58.14 ? CD 6NA 502 A 1 HETATM 7 C C6 6NA . . . C 3 11.12 -5.443 18.849 1 61.46 ? C6 6NA 502 A 1 HETATM 8 O OXT 6NA . . . C 3 14.653 -0.657 21.646 1 60.59 ? OXT 6NA 502 A 1 HETATM 9 H HAC1 6NA . . . C 3 14.975 -2.311 19.209 1 75.52 ? HAC1 6NA 502 A 1 HETATM 10 H HAC2 6NA . . . C 3 13.544 -1.771 19.058 1 75.52 ? HAC2 6NA 502 A 1 HETATM 11 H HBC1 6NA . . . C 3 13.015 -2.76 21.212 1 71.9 ? HBC1 6NA 502 A 1 HETATM 12 H HBC2 6NA . . . C 3 14.415 -3.419 21.197 1 71.9 ? HBC2 6NA 502 A 1 HETATM 13 H HGC1 6NA . . . C 3 13.5 -5.092 20.144 1 73.41 ? HGC1 6NA 502 A 1 HETATM 14 H HGC2 6NA . . . C 3 13.482 -4.19 18.888 1 73.41 ? HGC2 6NA 502 A 1 HETATM 15 H HDC1 6NA . . . C 3 11.276 -3.477 19.476 1 69.77 ? HDC1 6NA 502 A 1 HETATM 16 H HDC2 6NA . . . C 3 11.3 -4.47 20.666 1 69.77 ? HDC2 6NA 502 A 1 HETATM 17 H H6C1 6NA . . . C 3 10.159 -5.38 18.728 1 73.75 ? H6C1 6NA 502 A 1 HETATM 18 H H6C2 6NA . . . C 3 11.316 -6.318 19.219 1 73.75 ? H6C2 6NA 502 A 1 HETATM 19 H H6C3 6NA . . . C 3 11.533 -5.392 17.973 1 73.75 ? H6C3 6NA 502 A 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 237 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 19 #