data_8ABR
#
_model_server_result.job_id            UbH9jGMzuaJqgxLuifvIJw 
_model_server_result.datetime_utc      '2025-01-10 08:04:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8abr 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":503}' 
#
_entry.id    8ABR 
#
_exptl.entry_id    8ABR 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              144.211 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'OCTANOIC ACID (CAPRYLIC ACID)' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8ABR 
_cell.length_a            78.665 
_cell.length_b            78.665 
_cell.length_c            188.019 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8ABR 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   metalc 
_struct_conn.details                        ? 
_struct_conn.id                             metalc1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             351 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              351 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            B 
_struct_conn.ptnr2_label_atom_id            FE 
_struct_conn.ptnr2_label_comp_id            HEB 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             HEB 
_struct_conn.ptnr2_auth_seq_id              501 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.242 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C8 H16 O2' 
_chem_comp.formula_weight    144.211 
_chem_comp.id                OCA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'OCTANOIC ACID (CAPRYLIC ACID)' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 OCA sing 340 n n 
C1 O1 OCA doub 341 n n 
C1 O2 OCA sing 342 n n 
C2 C3 OCA sing 343 n n 
C2 H21 OCA sing 344 n n 
C2 H22 OCA sing 345 n n 
C3 C4 OCA sing 346 n n 
C3 H31 OCA sing 347 n n 
C3 H32 OCA sing 348 n n 
C4 C5 OCA sing 349 n n 
C4 H41 OCA sing 350 n n 
C4 H42 OCA sing 351 n n 
C5 C6 OCA sing 352 n n 
C5 H51 OCA sing 353 n n 
C5 H52 OCA sing 354 n n 
C6 C7 OCA sing 355 n n 
C6 H61 OCA sing 356 n n 
C6 H62 OCA sing 357 n n 
C7 C8 OCA sing 358 n n 
C7 H71 OCA sing 359 n n 
C7 H72 OCA sing 360 n n 
C8 H81 OCA sing 361 n n 
C8 H82 OCA sing 362 n n 
C8 H83 OCA sing 363 n n 
O2 HO2 OCA sing 364 n n 
#
_atom_sites.entry_id                     8ABR 
_atom_sites.fract_transf_matrix[1][1]    0.012712 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012712 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005319 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HEB A 1 501 501 HEB HEM . 
C 3 6NA A 1 502 502 6NA 6NA . 
D 4 OCA A 1 503 503 OCA OCA . 
E 5 SO4 A 1 504 1 SO4 SO4 . 
F 5 SO4 A 1 505 2 SO4 SO4 . 
G 5 SO4 A 1 506 3 SO4 SO4 . 
H 5 SO4 A 1 507 4 SO4 SO4 . 
I 5 SO4 A 1 508 5 SO4 SO4 . 
J 5 SO4 A 1 509 6 SO4 SO4 . 
K 6 HOH A 1 601 86 HOH HOH . 
K 6 HOH A 2 602 24 HOH HOH . 
K 6 HOH A 3 603 68 HOH HOH . 
K 6 HOH A 4 604 64 HOH HOH . 
K 6 HOH A 5 605 40 HOH HOH . 
K 6 HOH A 6 606 34 HOH HOH . 
K 6 HOH A 7 607 72 HOH HOH . 
K 6 HOH A 8 608 28 HOH HOH . 
K 6 HOH A 9 609 91 HOH HOH . 
K 6 HOH A 10 610 58 HOH HOH . 
K 6 HOH A 11 611 55 HOH HOH . 
K 6 HOH A 12 612 77 HOH HOH . 
K 6 HOH A 13 613 32 HOH HOH . 
K 6 HOH A 14 614 13 HOH HOH . 
K 6 HOH A 15 615 45 HOH HOH . 
K 6 HOH A 16 616 26 HOH HOH . 
K 6 HOH A 17 617 39 HOH HOH . 
K 6 HOH A 18 618 96 HOH HOH . 
K 6 HOH A 19 619 78 HOH HOH . 
K 6 HOH A 20 620 6 HOH HOH . 
K 6 HOH A 21 621 22 HOH HOH . 
K 6 HOH A 22 622 76 HOH HOH . 
K 6 HOH A 23 623 35 HOH HOH . 
K 6 HOH A 24 624 25 HOH HOH . 
K 6 HOH A 25 625 52 HOH HOH . 
K 6 HOH A 26 626 93 HOH HOH . 
K 6 HOH A 27 627 29 HOH HOH . 
K 6 HOH A 28 628 53 HOH HOH . 
K 6 HOH A 29 629 84 HOH HOH . 
K 6 HOH A 30 630 19 HOH HOH . 
K 6 HOH A 31 631 23 HOH HOH . 
K 6 HOH A 32 632 81 HOH HOH . 
K 6 HOH A 33 633 74 HOH HOH . 
K 6 HOH A 34 634 57 HOH HOH . 
K 6 HOH A 35 635 30 HOH HOH . 
K 6 HOH A 36 636 36 HOH HOH . 
K 6 HOH A 37 637 3 HOH HOH . 
K 6 HOH A 38 638 48 HOH HOH . 
K 6 HOH A 39 639 51 HOH HOH . 
K 6 HOH A 40 640 97 HOH HOH . 
K 6 HOH A 41 641 31 HOH HOH . 
K 6 HOH A 42 642 20 HOH HOH . 
K 6 HOH A 43 643 85 HOH HOH . 
K 6 HOH A 44 644 71 HOH HOH . 
K 6 HOH A 45 645 65 HOH HOH . 
K 6 HOH A 46 646 87 HOH HOH . 
K 6 HOH A 47 647 27 HOH HOH . 
K 6 HOH A 48 648 18 HOH HOH . 
K 6 HOH A 49 649 47 HOH HOH . 
K 6 HOH A 50 650 49 HOH HOH . 
K 6 HOH A 51 651 70 HOH HOH . 
K 6 HOH A 52 652 37 HOH HOH . 
K 6 HOH A 53 653 38 HOH HOH . 
K 6 HOH A 54 654 33 HOH HOH . 
K 6 HOH A 55 655 17 HOH HOH . 
K 6 HOH A 56 656 59 HOH HOH . 
K 6 HOH A 57 657 54 HOH HOH . 
K 6 HOH A 58 658 5 HOH HOH . 
K 6 HOH A 59 659 9 HOH HOH . 
K 6 HOH A 60 660 1 HOH HOH . 
K 6 HOH A 61 661 12 HOH HOH . 
K 6 HOH A 62 662 16 HOH HOH . 
K 6 HOH A 63 663 14 HOH HOH . 
K 6 HOH A 64 664 62 HOH HOH . 
K 6 HOH A 65 665 67 HOH HOH . 
K 6 HOH A 66 666 4 HOH HOH . 
K 6 HOH A 67 667 21 HOH HOH . 
K 6 HOH A 68 668 80 HOH HOH . 
K 6 HOH A 69 669 43 HOH HOH . 
K 6 HOH A 70 670 2 HOH HOH . 
K 6 HOH A 71 671 7 HOH HOH . 
K 6 HOH A 72 672 60 HOH HOH . 
K 6 HOH A 73 673 50 HOH HOH . 
K 6 HOH A 74 674 66 HOH HOH . 
K 6 HOH A 75 675 44 HOH HOH . 
K 6 HOH A 76 676 79 HOH HOH . 
K 6 HOH A 77 677 15 HOH HOH . 
K 6 HOH A 78 678 61 HOH HOH . 
K 6 HOH A 79 679 10 HOH HOH . 
K 6 HOH A 80 680 83 HOH HOH . 
K 6 HOH A 81 681 42 HOH HOH . 
K 6 HOH A 82 682 11 HOH HOH . 
K 6 HOH A 83 683 94 HOH HOH . 
K 6 HOH A 84 684 56 HOH HOH . 
K 6 HOH A 85 685 8 HOH HOH . 
K 6 HOH A 86 686 88 HOH HOH . 
K 6 HOH A 87 687 73 HOH HOH . 
K 6 HOH A 88 688 89 HOH HOH . 
K 6 HOH A 89 689 90 HOH HOH . 
K 6 HOH A 90 690 92 HOH HOH . 
K 6 HOH A 91 691 75 HOH HOH . 
K 6 HOH A 92 692 63 HOH HOH . 
K 6 HOH A 93 693 69 HOH HOH . 
K 6 HOH A 94 694 82 HOH HOH . 
K 6 HOH A 95 695 41 HOH HOH . 
K 6 HOH A 96 696 46 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 OCA . . . D 4 8.374 2.515 13.013 1 95.15 ? C1 OCA 503 A 1 
HETATM 2 C C2 OCA . . . D 4 7.721 1.189 13.48 1 81.8 ? C2 OCA 503 A 1 
HETATM 3 C C3 OCA . . . D 4 8.137 0.662 14.848 1 90.16 ? C3 OCA 503 A 1 
HETATM 4 C C4 OCA . . . D 4 7.921 -0.837 14.992 1 80.94 ? C4 OCA 503 A 1 
HETATM 5 C C5 OCA . . . D 4 9.191 -1.666 14.884 1 82.78 ? C5 OCA 503 A 1 
HETATM 6 C C6 OCA . . . D 4 9.996 -1.802 16.172 1 83.24 ? C6 OCA 503 A 1 
HETATM 7 C C7 OCA . . . D 4 11.297 -2.567 16.031 1 78.62 ? C7 OCA 503 A 1 
HETATM 8 C C8 OCA . . . D 4 11.135 -3.988 15.565 1 76.47 ? C8 OCA 503 A 1 
HETATM 9 O O1 OCA . . . D 4 7.644 3.488 12.732 1 97.54 ? O1 OCA 503 A 1 
HETATM 10 O O2 OCA . . . D 4 9.623 2.522 12.955 1 91.52 ? O2 OCA 503 A 1 
HETATM 11 H H21 OCA . . . D 4 7.902 0.514 12.808 1 98.16 ? H21 OCA 503 A 1 
HETATM 12 H H22 OCA . . . D 4 6.759 1.308 13.461 1 98.16 ? H22 OCA 503 A 1 
HETATM 13 H H31 OCA . . . D 4 7.64 1.124 15.542 1 108.19 ? H31 OCA 503 A 1 
HETATM 14 H H32 OCA . . . D 4 9.071 0.867 15.008 1 108.19 ? H32 OCA 503 A 1 
HETATM 15 H H41 OCA . . . D 4 7.292 -1.135 14.317 1 97.13 ? H41 OCA 503 A 1 
HETATM 16 H H42 OCA . . . D 4 7.498 -1.018 15.846 1 97.13 ? H42 OCA 503 A 1 
HETATM 17 H H51 OCA . . . D 4 9.761 -1.278 14.202 1 99.34 ? H51 OCA 503 A 1 
HETATM 18 H H52 OCA . . . D 4 8.96 -2.553 14.568 1 99.34 ? H52 OCA 503 A 1 
HETATM 19 H H61 OCA . . . D 4 9.446 -2.237 16.842 1 99.89 ? H61 OCA 503 A 1 
HETATM 20 H H62 OCA . . . D 4 10.187 -0.916 16.519 1 99.89 ? H62 OCA 503 A 1 
HETATM 21 H H71 OCA . . . D 4 11.759 -2.563 16.883 1 94.34 ? H71 OCA 503 A 1 
HETATM 22 H H72 OCA . . . D 4 11.875 -2.094 15.411 1 94.34 ? H72 OCA 503 A 1 
HETATM 23 H H81 OCA . . . D 4 10.258 -4.334 15.792 1 91.77 ? H81 OCA 503 A 1 
HETATM 24 H H82 OCA . . . D 4 11.796 -4.569 15.973 1 91.77 ? H82 OCA 503 A 1 
HETATM 25 H H83 OCA . . . D 4 11.238 -4.056 14.603 1 91.77 ? H83 OCA 503 A 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           302 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           25 
#