data_8ACO # _model_server_result.job_id RWY6OEXAJT08y9GXIqlBew _model_server_result.datetime_utc '2024-11-26 01:26:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8aco # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 8ACO # _exptl.entry_id 8ACO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 377.435 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-[5-(4-FLUORO-PHENYL)-2-(4-METHANESULFINYL-PHENYL)-3H-IMIDAZOL-4-YL]-PYRIDINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8ACO _cell.length_a 65.3 _cell.length_b 74.612 _cell.length_c 78.1 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8ACO _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 119 AAA CYS 119 1_555 A SG CYS 162 AAA CYS 162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc1 A O MET 78 AAA MET 78 1_555 C MG MG . AAA MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.778 ? metalc ? metalc2 A O VAL 83 AAA VAL 83 1_555 C MG MG . AAA MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.722 ? metalc ? metalc3 C MG MG . AAA MG 402 1_555 E O HOH . AAA HOH 596 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.705 ? metalc ? metalc4 D MG MG . AAA MG 403 1_555 E O HOH . AAA HOH 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.54 ? metalc ? metalc5 D MG MG . AAA MG 403 1_555 E O HOH . AAA HOH 545 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.684 ? metalc ? metalc6 D MG MG . AAA MG 403 1_555 E O HOH . AAA HOH 563 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.803 ? metalc ? metalc7 D MG MG . AAA MG 403 1_555 E O HOH . AAA HOH 583 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.918 ? metalc ? metalc8 D MG MG . AAA MG 403 1_555 E O HOH . AAA HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.435 ? # _chem_comp.formula 'C21 H16 F N3 O S' _chem_comp.formula_weight 377.435 _chem_comp.id SB2 _chem_comp.mon_nstd_flag . _chem_comp.name 4-[5-(4-FLUORO-PHENYL)-2-(4-METHANESULFINYL-PHENYL)-3H-IMIDAZOL-4-YL]-PYRIDINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O2 S1 SB2 doub 277 n n C1 S1 SB2 sing 278 n n C1 H11 SB2 sing 279 n n C1 H12 SB2 sing 280 n n C1 H13 SB2 sing 281 n n S1 CA3 SB2 sing 282 n n CA1 CA2 SB2 doub 283 n y CA1 CA6 SB2 sing 284 n y CA1 HA1 SB2 sing 285 n n CA2 CA3 SB2 sing 286 n y CA2 HA2 SB2 sing 287 n n CA3 CA4 SB2 doub 288 n y CA4 CA5 SB2 sing 289 n y CA4 HA4 SB2 sing 290 n n CA5 CA6 SB2 doub 291 n y CA5 HA5 SB2 sing 292 n n CA6 CC2 SB2 sing 293 n y NB1 CB2 SB2 doub 294 n y NB1 CB6 SB2 sing 295 n y CB2 CB3 SB2 sing 296 n y CB2 HB2 SB2 sing 297 n n CB3 CB4 SB2 doub 298 n y CB3 HB3 SB2 sing 299 n n CB4 CB5 SB2 sing 300 n y CB4 CC5 SB2 sing 301 n y CB5 CB6 SB2 doub 302 n y CB5 HB5 SB2 sing 303 n n CB6 HB6 SB2 sing 304 n n NC1 CC2 SB2 sing 305 n y NC1 CC5 SB2 sing 306 n y NC1 HN1 SB2 sing 307 n n CC2 NC3 SB2 doub 308 n y NC3 CC4 SB2 sing 309 n y CC4 CC5 SB2 doub 310 n y CC4 CD6 SB2 sing 311 n y CD1 CD2 SB2 doub 312 n y CD1 CD6 SB2 sing 313 n y CD1 HD1 SB2 sing 314 n n CD2 CD3 SB2 sing 315 n y CD2 HD2 SB2 sing 316 n n CD3 CD4 SB2 doub 317 n y CD3 FD3 SB2 sing 318 n n CD4 CD5 SB2 sing 319 n y CD4 HD4 SB2 sing 320 n n CD5 CD6 SB2 doub 321 n y CD5 HD5 SB2 sing 322 n n # _atom_sites.entry_id 8ACO _atom_sites.fract_transf_matrix[1][1] 0.015314 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013403 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012804 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SB2 AAA 1 401 1 SB2 SB2 . C 3 MG AAA 1 402 2 MG MG . D 3 MG AAA 1 403 3 MG MG . E 4 HOH AAA 1 501 102 HOH HOH . E 4 HOH AAA 2 502 61 HOH HOH . E 4 HOH AAA 3 503 197 HOH HOH . E 4 HOH AAA 4 504 66 HOH HOH . E 4 HOH AAA 5 505 35 HOH HOH . E 4 HOH AAA 6 506 31 HOH HOH . E 4 HOH AAA 7 507 113 HOH HOH . E 4 HOH AAA 8 508 104 HOH HOH . E 4 HOH AAA 9 509 33 HOH HOH . E 4 HOH AAA 10 510 100 HOH HOH . E 4 HOH AAA 11 511 105 HOH HOH . E 4 HOH AAA 12 512 15 HOH HOH . E 4 HOH AAA 13 513 11 HOH HOH . E 4 HOH AAA 14 514 3 HOH HOH . E 4 HOH AAA 15 515 52 HOH HOH . E 4 HOH AAA 16 516 127 HOH HOH . E 4 HOH AAA 17 517 133 HOH HOH . E 4 HOH AAA 18 518 8 HOH HOH . E 4 HOH AAA 19 519 54 HOH HOH . E 4 HOH AAA 20 520 50 HOH HOH . E 4 HOH AAA 21 521 118 HOH HOH . E 4 HOH AAA 22 522 19 HOH HOH . E 4 HOH AAA 23 523 37 HOH HOH . E 4 HOH AAA 24 524 90 HOH HOH . E 4 HOH AAA 25 525 28 HOH HOH . E 4 HOH AAA 26 526 5 HOH HOH . E 4 HOH AAA 27 527 70 HOH HOH . E 4 HOH AAA 28 528 51 HOH HOH . E 4 HOH AAA 29 529 159 HOH HOH . E 4 HOH AAA 30 530 38 HOH HOH . E 4 HOH AAA 31 531 4 HOH HOH . E 4 HOH AAA 32 532 6 HOH HOH . E 4 HOH AAA 33 533 44 HOH HOH . E 4 HOH AAA 34 534 182 HOH HOH . E 4 HOH AAA 35 535 9 HOH HOH . E 4 HOH AAA 36 536 53 HOH HOH . E 4 HOH AAA 37 537 64 HOH HOH . E 4 HOH AAA 38 538 78 HOH HOH . E 4 HOH AAA 39 539 80 HOH HOH . E 4 HOH AAA 40 540 210 HOH HOH . E 4 HOH AAA 41 541 13 HOH HOH . E 4 HOH AAA 42 542 49 HOH HOH . E 4 HOH AAA 43 543 125 HOH HOH . E 4 HOH AAA 44 544 2 HOH HOH . E 4 HOH AAA 45 545 67 HOH HOH . E 4 HOH AAA 46 546 42 HOH HOH . E 4 HOH AAA 47 547 108 HOH HOH . E 4 HOH AAA 48 548 27 HOH HOH . E 4 HOH AAA 49 549 24 HOH HOH . E 4 HOH AAA 50 550 26 HOH HOH . E 4 HOH AAA 51 551 79 HOH HOH . E 4 HOH AAA 52 552 166 HOH HOH . E 4 HOH AAA 53 553 12 HOH HOH . E 4 HOH AAA 54 554 32 HOH HOH . E 4 HOH AAA 55 555 30 HOH HOH . E 4 HOH AAA 56 556 14 HOH HOH . E 4 HOH AAA 57 557 20 HOH HOH . E 4 HOH AAA 58 558 95 HOH HOH . E 4 HOH AAA 59 559 115 HOH HOH . E 4 HOH AAA 60 560 47 HOH HOH . E 4 HOH AAA 61 561 34 HOH HOH . E 4 HOH AAA 62 562 124 HOH HOH . E 4 HOH AAA 63 563 212 HOH HOH . E 4 HOH AAA 64 564 160 HOH HOH . E 4 HOH AAA 65 565 139 HOH HOH . E 4 HOH AAA 66 566 191 HOH HOH . E 4 HOH AAA 67 567 89 HOH HOH . E 4 HOH AAA 68 568 96 HOH HOH . E 4 HOH AAA 69 569 36 HOH HOH . E 4 HOH AAA 70 570 40 HOH HOH . E 4 HOH AAA 71 571 29 HOH HOH . E 4 HOH AAA 72 572 25 HOH HOH . E 4 HOH AAA 73 573 190 HOH HOH . E 4 HOH AAA 74 574 200 HOH HOH . E 4 HOH AAA 75 575 155 HOH HOH . E 4 HOH AAA 76 576 18 HOH HOH . E 4 HOH AAA 77 577 39 HOH HOH . E 4 HOH AAA 78 578 106 HOH HOH . E 4 HOH AAA 79 579 16 HOH HOH . E 4 HOH AAA 80 580 63 HOH HOH . E 4 HOH AAA 81 581 69 HOH HOH . E 4 HOH AAA 82 582 94 HOH HOH . E 4 HOH AAA 83 583 213 HOH HOH . E 4 HOH AAA 84 584 114 HOH HOH . E 4 HOH AAA 85 585 57 HOH HOH . E 4 HOH AAA 86 586 162 HOH HOH . E 4 HOH AAA 87 587 55 HOH HOH . E 4 HOH AAA 88 588 59 HOH HOH . E 4 HOH AAA 89 589 82 HOH HOH . E 4 HOH AAA 90 590 41 HOH HOH . E 4 HOH AAA 91 591 77 HOH HOH . E 4 HOH AAA 92 592 84 HOH HOH . E 4 HOH AAA 93 593 71 HOH HOH . E 4 HOH AAA 94 594 144 HOH HOH . E 4 HOH AAA 95 595 56 HOH HOH . E 4 HOH AAA 96 596 58 HOH HOH . E 4 HOH AAA 97 597 10 HOH HOH . E 4 HOH AAA 98 598 81 HOH HOH . E 4 HOH AAA 99 599 145 HOH HOH . E 4 HOH AAA 100 600 146 HOH HOH . E 4 HOH AAA 101 601 211 HOH HOH . E 4 HOH AAA 102 602 74 HOH HOH . E 4 HOH AAA 103 603 129 HOH HOH . E 4 HOH AAA 104 604 73 HOH HOH . E 4 HOH AAA 105 605 88 HOH HOH . E 4 HOH AAA 106 606 196 HOH HOH . E 4 HOH AAA 107 607 76 HOH HOH . E 4 HOH AAA 108 608 142 HOH HOH . E 4 HOH AAA 109 609 43 HOH HOH . E 4 HOH AAA 110 610 75 HOH HOH . E 4 HOH AAA 111 611 206 HOH HOH . E 4 HOH AAA 112 612 207 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2 SB2 . . . B 2 3.452 -6.871 -22.114 1 62.14 0 O2 SB2 401 AAA 1 HETATM 2 C C1 SB2 . . . B 2 1.463 -8.294 -23.1 1 63.16 0 C1 SB2 401 AAA 1 HETATM 3 S S1 SB2 . . . B 2 2.42 -6.786 -23.206 1 60.82 0 S1 SB2 401 AAA 1 HETATM 4 C CA1 SB2 . . . B 2 -0.017 -3.596 -22.935 1 53 0 CA1 SB2 401 AAA 1 HETATM 5 C CA2 SB2 . . . B 2 0.914 -4.509 -23.379 1 54.63 0 CA2 SB2 401 AAA 1 HETATM 6 C CA3 SB2 . . . B 2 1.186 -5.625 -22.616 1 56.81 0 CA3 SB2 401 AAA 1 HETATM 7 C CA4 SB2 . . . B 2 0.553 -5.82 -21.399 1 56.11 0 CA4 SB2 401 AAA 1 HETATM 8 C CA5 SB2 . . . B 2 -0.38 -4.897 -20.959 1 54.55 0 CA5 SB2 401 AAA 1 HETATM 9 C CA6 SB2 . . . B 2 -0.703 -3.79 -21.74 1 51.82 0 CA6 SB2 401 AAA 1 HETATM 10 N NB1 SB2 . . . B 2 -3.458 3.169 -22.542 1 43.2 0 NB1 SB2 401 AAA 1 HETATM 11 C CB2 SB2 . . . B 2 -3.29 2.16 -23.396 1 41.14 0 CB2 SB2 401 AAA 1 HETATM 12 C CB3 SB2 . . . B 2 -3.029 0.866 -23.005 1 42.1 0 CB3 SB2 401 AAA 1 HETATM 13 C CB4 SB2 . . . B 2 -2.951 0.564 -21.655 1 43.68 0 CB4 SB2 401 AAA 1 HETATM 14 C CB5 SB2 . . . B 2 -3.099 1.61 -20.761 1 43.88 0 CB5 SB2 401 AAA 1 HETATM 15 C CB6 SB2 . . . B 2 -3.358 2.875 -21.244 1 43.92 0 CB6 SB2 401 AAA 1 HETATM 16 N NC1 SB2 . . . B 2 -1.748 -1.568 -21.897 1 47.15 0 NC1 SB2 401 AAA 1 HETATM 17 C CC2 SB2 . . . B 2 -1.625 -2.762 -21.279 1 48.16 0 CC2 SB2 401 AAA 1 HETATM 18 N NC3 SB2 . . . B 2 -2.351 -2.786 -20.165 1 46.89 0 NC3 SB2 401 AAA 1 HETATM 19 C CC4 SB2 . . . B 2 -3.008 -1.562 -20.115 1 46.25 0 CC4 SB2 401 AAA 1 HETATM 20 C CC5 SB2 . . . B 2 -2.637 -0.793 -21.195 1 45.87 0 CC5 SB2 401 AAA 1 HETATM 21 C CD1 SB2 . . . B 2 -5.112 -0.557 -19.243 1 45.13 0 CD1 SB2 401 AAA 1 HETATM 22 C CD2 SB2 . . . B 2 -5.951 -0.203 -18.203 1 44.83 0 CD2 SB2 401 AAA 1 HETATM 23 C CD3 SB2 . . . B 2 -5.563 -0.498 -16.925 1 44.1 0 CD3 SB2 401 AAA 1 HETATM 24 C CD4 SB2 . . . B 2 -4.386 -1.13 -16.631 1 43.5 0 CD4 SB2 401 AAA 1 HETATM 25 C CD5 SB2 . . . B 2 -3.554 -1.485 -17.677 1 44.33 0 CD5 SB2 401 AAA 1 HETATM 26 C CD6 SB2 . . . B 2 -3.913 -1.228 -19.002 1 45.05 0 CD6 SB2 401 AAA 1 HETATM 27 F FD3 SB2 . . . B 2 -6.386 -0.143 -15.902 1 46.2 0 FD3 SB2 401 AAA 1 HETATM 28 H H11 SB2 . . . B 2 1.033 -8.348 -22.23 1 62.57 0 H11 SB2 401 AAA 1 HETATM 29 H H12 SB2 . . . B 2 2.051 -9.058 -23.217 1 62.49 0 H12 SB2 401 AAA 1 HETATM 30 H H13 SB2 . . . B 2 0.787 -8.296 -23.798 1 62.6 0 H13 SB2 401 AAA 1 HETATM 31 H HA1 SB2 . . . B 2 -0.203 -2.843 -23.462 1 53.17 0 HA1 SB2 401 AAA 1 HETATM 32 H HA2 SB2 . . . B 2 1.352 -4.377 -24.202 1 54.7 0 HA2 SB2 401 AAA 1 HETATM 33 H HA4 SB2 . . . B 2 0.748 -6.578 -20.878 1 55.77 0 HA4 SB2 401 AAA 1 HETATM 34 H HA5 SB2 . . . B 2 -0.816 -5.034 -20.136 1 54.26 0 HA5 SB2 401 AAA 1 HETATM 35 H HB2 SB2 . . . B 2 -3.359 2.344 -24.32 1 41.98 0 HB2 SB2 401 AAA 1 HETATM 36 H HB3 SB2 . . . B 2 -2.92 0.189 -23.648 1 42.35 0 HB3 SB2 401 AAA 1 HETATM 37 H HB5 SB2 . . . B 2 -3.04 1.455 -19.835 1 43.77 0 HB5 SB2 401 AAA 1 HETATM 38 H HB6 SB2 . . . B 2 -3.476 3.574 -20.621 1 43.7 0 HB6 SB2 401 AAA 1 HETATM 39 H HN1 SB2 . . . B 2 -1.348 -1.333 -22.634 1 47.02 0 HN1 SB2 401 AAA 1 HETATM 40 H HD1 SB2 . . . B 2 -5.364 -0.362 -20.126 1 45.01 0 HD1 SB2 401 AAA 1 HETATM 41 H HD2 SB2 . . . B 2 -6.767 0.233 -18.369 1 44.73 0 HD2 SB2 401 AAA 1 HETATM 42 H HD4 SB2 . . . B 2 -4.15 -1.321 -15.74 1 43.94 0 HD4 SB2 401 AAA 1 HETATM 43 H HD5 SB2 . . . B 2 -2.742 -1.919 -17.493 1 44.36 0 HD5 SB2 401 AAA 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 43 #