data_8ACW # _model_server_result.job_id Da_580_OlPTLxucmnTAguw _model_server_result.datetime_utc '2025-07-12 14:59:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8acw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":201}' # _entry.id 8ACW # _exptl.entry_id 8ACW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 510.615 _entity.id 9 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECYL-BETA-D-MALTOSIDE _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.93 _cell.angle_gamma 90 _cell.entry_id 8ACW _cell.length_a 93.72 _cell.length_b 142.94 _cell.length_c 103.39 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8ACW _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 9 I N N ? 9 L N N ? 9 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B OG1 THR 236 B THR 236 1_555 G P FMN . B FMN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.597 ? covale ? covale2 C OG1 THR 225 C THR 225 1_555 K P FMN . C FMN 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.604 ? metalc ? metalc1 B O ILE 371 B ILE 371 1_555 J K K . B K 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.362 ? metalc ? metalc2 B O ARG 372 B ARG 372 1_555 J K K . B K 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.427 ? metalc ? metalc3 B O ASN 375 B ASN 375 1_555 J K K . B K 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.78 ? metalc ? metalc4 B O TYR 378 B TYR 378 1_555 J K K . B K 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? metalc ? metalc5 D SG CYS 29 D CYS 29 1_555 O FE2 FES . E FES 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc6 D SG CYS 112 D CYS 112 1_555 O FE1 FES . E FES 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? metalc ? metalc7 E SG CYS 26 E CYS 26 1_555 O FE1 FES . E FES 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? metalc ? metalc8 E SG CYS 120 E CYS 120 1_555 O FE2 FES . E FES 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc9 F SG CYS 70 F CYS 70 1_555 Q FE1 FES . F FES 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc10 F SG CYS 76 F CYS 76 1_555 Q FE1 FES . F FES 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc11 F SG CYS 79 F CYS 79 1_555 Q FE2 FES . F FES 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc12 F SG CYS 111 F CYS 111 1_555 Q FE2 FES . F FES 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? # _chem_comp.formula 'C24 H46 O11' _chem_comp.formula_weight 510.615 _chem_comp.id LMT _chem_comp.mon_nstd_flag . _chem_comp.name DODECYL-BETA-D-MALTOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1B C2B LMT sing 341 n n C1B O1B LMT sing 342 n n C1B O5B LMT sing 343 n n C1B H1B LMT sing 344 n n C2B C3B LMT sing 345 n n C2B O2B LMT sing 346 n n C2B H2B LMT sing 347 n n C3B C4B LMT sing 348 n n C3B O3B LMT sing 349 n n C3B H3B LMT sing 350 n n C4B C5B LMT sing 351 n n C4B O4' LMT sing 352 n n C4B H4B LMT sing 353 n n C5B C6B LMT sing 354 n n C5B O5B LMT sing 355 n n C5B H5B LMT sing 356 n n C6B O6B LMT sing 357 n n C6B "H6'2" LMT sing 358 n n C6B "H6'1" LMT sing 359 n n O1B C4' LMT sing 360 n n O2B H2O1 LMT sing 361 n n O3B H3O1 LMT sing 362 n n O4' H4O1 LMT sing 363 n n O6B H6B LMT sing 364 n n C1' C2' LMT sing 365 n n C1' O1' LMT sing 366 n n C1' O5' LMT sing 367 n n C1' H1' LMT sing 368 n n C2' C3' LMT sing 369 n n C2' O2' LMT sing 370 n n C2' H2' LMT sing 371 n n C3' C4' LMT sing 372 n n C3' O3' LMT sing 373 n n C3' H3' LMT sing 374 n n C4' C5' LMT sing 375 n n C4' H4' LMT sing 376 n n C5' C6' LMT sing 377 n n C5' O5' LMT sing 378 n n C5' H5' LMT sing 379 n n C6' O6' LMT sing 380 n n C6' H6D LMT sing 381 n n C6' H6E LMT sing 382 n n O1' C1 LMT sing 383 n n O2' H2O2 LMT sing 384 n n O3' H3O2 LMT sing 385 n n O6' H6' LMT sing 386 n n C1 C2 LMT sing 387 n n C1 H12 LMT sing 388 n n C1 H11 LMT sing 389 n n C2 C3 LMT sing 390 n n C2 H22 LMT sing 391 n n C2 H21 LMT sing 392 n n C3 C4 LMT sing 393 n n C3 H32 LMT sing 394 n n C3 H31 LMT sing 395 n n C4 C5 LMT sing 396 n n C4 H42 LMT sing 397 n n C4 H41 LMT sing 398 n n C5 C6 LMT sing 399 n n C5 H52 LMT sing 400 n n C5 H51 LMT sing 401 n n C6 C7 LMT sing 402 n n C6 H62 LMT sing 403 n n C6 H61 LMT sing 404 n n C7 C8 LMT sing 405 n n C7 H72 LMT sing 406 n n C7 H71 LMT sing 407 n n C8 C9 LMT sing 408 n n C8 H82 LMT sing 409 n n C8 H81 LMT sing 410 n n C9 C10 LMT sing 411 n n C9 H92 LMT sing 412 n n C9 H91 LMT sing 413 n n C10 C11 LMT sing 414 n n C10 H102 LMT sing 415 n n C10 H101 LMT sing 416 n n C11 C12 LMT sing 417 n n C11 H112 LMT sing 418 n n C11 H111 LMT sing 419 n n C12 H123 LMT sing 420 n n C12 H122 LMT sing 421 n n C12 H121 LMT sing 422 n n # _atom_sites.entry_id 8ACW _atom_sites.fract_transf_matrix[1][1] 0.01067 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003869 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006996 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010288 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 7 FMN B 1 501 600 FMN FMN . H 8 RBF B 1 502 601 RBF RBF . I 9 LMT B 1 503 605 LMT LMT . J 10 K B 1 504 1 K K . K 7 FMN C 1 1000 1000 FMN FMN . L 9 LMT D 1 301 604 LMT LMT . M 11 LYS D 1 302 209 LYS LYS . N 9 LMT E 1 201 603 LMT LMT . O 12 FES E 1 202 1001 FES FES . P 13 FAD F 1 1501 1501 FAD FAD . Q 12 FES F 1 1502 1502 FES FES . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1B LMT . . . N 9 2.727 -7.955 -29.355 1 188.73 ? C1B LMT 201 E 1 HETATM 2 C C2B LMT . . . N 9 1.998 -9.254 -29.734 1 185.44 ? C2B LMT 201 E 1 HETATM 3 C C3B LMT . . . N 9 2.405 -9.724 -31.138 1 195.76 ? C3B LMT 201 E 1 HETATM 4 C C4B LMT . . . N 9 3.226 -8.652 -31.888 1 194.76 ? C4B LMT 201 E 1 HETATM 5 C C5B LMT . . . N 9 4.392 -8.204 -31.006 1 224.27 ? C5B LMT 201 E 1 HETATM 6 C C6B LMT . . . N 9 4.943 -6.862 -31.531 1 215.52 ? C6B LMT 201 E 1 HETATM 7 O O1B LMT . . . N 9 2.518 -7.703 -28.005 1 194.58 ? O1B LMT 201 E 1 HETATM 8 O O2B LMT . . . N 9 2.36 -10.189 -28.793 1 163.08 ? O2B LMT 201 E 1 HETATM 9 O O3B LMT . . . N 9 1.305 -10.126 -31.867 1 210.39 ? O3B LMT 201 E 1 HETATM 10 O O4' LMT . . . N 9 3.74 -9.192 -33.06 1 219.41 ? O4' LMT 201 E 1 HETATM 11 O O5B LMT . . . N 9 4.083 -8.068 -29.64 1 231.86 ? O5B LMT 201 E 1 HETATM 12 O O6B LMT . . . N 9 6.228 -6.669 -31.115 1 182.18 ? O6B LMT 201 E 1 HETATM 13 C C1' LMT . . . N 9 3.941 -4.978 -25.235 1 190.91 ? C1' LMT 201 E 1 HETATM 14 C C2' LMT . . . N 9 4.271 -4.641 -26.711 1 191.56 ? C2' LMT 201 E 1 HETATM 15 C C3' LMT . . . N 9 3.347 -5.483 -27.644 1 169.18 ? C3' LMT 201 E 1 HETATM 16 C C4' LMT . . . N 9 3.503 -6.976 -27.313 1 152.22 ? C4' LMT 201 E 1 HETATM 17 C C5' LMT . . . N 9 3.185 -7.072 -25.807 1 135.95 ? C5' LMT 201 E 1 HETATM 18 C C6' LMT . . . N 9 3.056 -8.487 -25.298 1 158.03 ? C6' LMT 201 E 1 HETATM 19 O O1' LMT . . . N 9 4.791 -4.321 -24.395 1 192.84 ? O1' LMT 201 E 1 HETATM 20 O O2' LMT . . . N 9 4.053 -3.312 -26.917 1 214.64 ? O2' LMT 201 E 1 HETATM 21 O O3' LMT . . . N 9 3.629 -5.255 -28.948 1 182.38 ? O3' LMT 201 E 1 HETATM 22 O O5' LMT . . . N 9 4.13 -6.376 -25.048 1 179.57 ? O5' LMT 201 E 1 HETATM 23 O O6' LMT . . . N 9 2.641 -8.376 -24.003 1 154.43 ? O6' LMT 201 E 1 HETATM 24 C C1 LMT . . . N 9 4.173 -3.335 -23.612 1 187.51 ? C1 LMT 201 E 1 HETATM 25 C C2 LMT . . . N 9 5.292 -2.415 -23.17 1 168.97 ? C2 LMT 201 E 1 HETATM 26 C C3 LMT . . . N 9 5.992 -2.753 -21.892 1 173.14 ? C3 LMT 201 E 1 HETATM 27 C C4 LMT . . . N 9 4.98 -2.676 -20.777 1 156.03 ? C4 LMT 201 E 1 HETATM 28 C C5 LMT . . . N 9 5.647 -2.637 -19.446 1 154.85 ? C5 LMT 201 E 1 HETATM 29 C C6 LMT . . . N 9 4.81 -1.91 -18.443 1 156.52 ? C6 LMT 201 E 1 HETATM 30 C C7 LMT . . . N 9 5.446 -1.951 -17.085 1 146.42 ? C7 LMT 201 E 1 HETATM 31 C C8 LMT . . . N 9 6.354 -0.771 -16.897 1 126.56 ? C8 LMT 201 E 1 HETATM 32 C C9 LMT . . . N 9 5.693 0.573 -16.878 1 142.86 ? C9 LMT 201 E 1 HETATM 33 C C10 LMT . . . N 9 4.893 0.705 -15.607 1 176.1 ? C10 LMT 201 E 1 HETATM 34 C C11 LMT . . . N 9 5.63 1.457 -14.536 1 155.27 ? C11 LMT 201 E 1 HETATM 35 C C12 LMT . . . N 9 5.964 2.853 -14.959 1 143.69 ? C12 LMT 201 E 1 HETATM 36 H H1B LMT . . . N 9 2.403 -7.242 -29.928 1 226.8 ? H1B LMT 201 E 1 HETATM 37 H H2B LMT . . . N 9 1.049 -9.054 -29.765 1 222.85 ? H2B LMT 201 E 1 HETATM 38 H H3B LMT . . . N 9 2.986 -10.487 -30.996 1 235.23 ? H3B LMT 201 E 1 HETATM 39 H H4B LMT . . . N 9 2.661 -7.873 -32.008 1 234.04 ? H4B LMT 201 E 1 HETATM 40 H H5B LMT . . . N 9 5.065 -8.898 -31.093 1 269.45 ? H5B LMT 201 E 1 HETATM 41 H "H6'2" LMT . . . N 9 4.338 -6.155 -31.258 1 258.95 ? "H6'2" LMT 201 E 1 HETATM 42 H "H6'1" LMT . . . N 9 4.842 -6.847 -32.496 1 258.95 ? "H6'1" LMT 201 E 1 HETATM 43 H H2O1 LMT . . . N 9 2.483 -9.762 -28.068 1 196.02 ? H2O1 LMT 201 E 1 HETATM 44 H H3O1 LMT . . . N 9 1.587 -10.377 -32.627 1 252.79 ? H3O1 LMT 201 E 1 HETATM 45 H H4O1 LMT . . . N 9 3.798 -8.565 -33.626 1 263.61 ? H4O1 LMT 201 E 1 HETATM 46 H H6B LMT . . . N 9 6.412 -5.871 -31.34 1 218.93 ? H6B LMT 201 E 1 HETATM 47 H H1' LMT . . . N 9 3.013 -4.757 -25.063 1 229.41 ? H1' LMT 201 E 1 HETATM 48 H H2' LMT . . . N 9 5.189 -4.902 -26.884 1 230.19 ? H2' LMT 201 E 1 HETATM 49 H H3' LMT . . . N 9 2.433 -5.246 -27.423 1 203.34 ? H3' LMT 201 E 1 HETATM 50 H H4' LMT . . . N 9 4.41 -7.262 -27.503 1 182.99 ? H4' LMT 201 E 1 HETATM 51 H H5' LMT . . . N 9 2.313 -6.658 -25.713 1 163.47 ? H5' LMT 201 E 1 HETATM 52 H H6D LMT . . . N 9 3.898 -8.954 -25.415 1 189.95 ? H6D LMT 201 E 1 HETATM 53 H H6E LMT . . . N 9 2.457 -8.987 -25.874 1 189.95 ? H6E LMT 201 E 1 HETATM 54 H H2O2 LMT . . . N 9 4.754 -2.913 -26.631 1 257.89 ? H2O2 LMT 201 E 1 HETATM 55 H H6' LMT . . . N 9 3.065 -7.719 -23.678 1 185.64 ? H6' LMT 201 E 1 HETATM 56 H H12 LMT . . . N 9 3.695 -3.729 -22.865 1 225.33 ? H12 LMT 201 E 1 HETATM 57 H H11 LMT . . . N 9 3.482 -2.872 -24.112 1 225.33 ? H11 LMT 201 E 1 HETATM 58 H H22 LMT . . . N 9 4.934 -1.517 -23.096 1 203.08 ? H22 LMT 201 E 1 HETATM 59 H H21 LMT . . . N 9 5.952 -2.379 -23.88 1 203.08 ? H21 LMT 201 E 1 HETATM 60 H H32 LMT . . . N 9 6.728 -2.147 -21.713 1 208.09 ? H32 LMT 201 E 1 HETATM 61 H H31 LMT . . . N 9 6.385 -3.639 -21.921 1 208.09 ? H31 LMT 201 E 1 HETATM 62 H H42 LMT . . . N 9 4.373 -3.431 -20.825 1 187.56 ? H42 LMT 201 E 1 HETATM 63 H H41 LMT . . . N 9 4.417 -1.894 -20.893 1 187.56 ? H41 LMT 201 E 1 HETATM 64 H H52 LMT . . . N 9 6.516 -2.213 -19.531 1 186.14 ? H52 LMT 201 E 1 HETATM 65 H H51 LMT . . . N 9 5.825 -3.541 -19.146 1 186.14 ? H51 LMT 201 E 1 HETATM 66 H H62 LMT . . . N 9 3.919 -2.29 -18.405 1 188.14 ? H62 LMT 201 E 1 HETATM 67 H H61 LMT . . . N 9 4.673 -0.99 -18.718 1 188.14 ? H61 LMT 201 E 1 HETATM 68 H H72 LMT . . . N 9 5.934 -2.782 -16.977 1 176.02 ? H72 LMT 201 E 1 HETATM 69 H H71 LMT . . . N 9 4.758 -1.97 -16.401 1 176.02 ? H71 LMT 201 E 1 HETATM 70 H H82 LMT . . . N 9 7.026 -0.774 -17.596 1 152.19 ? H82 LMT 201 E 1 HETATM 71 H H81 LMT . . . N 9 6.85 -0.882 -16.071 1 152.19 ? H81 LMT 201 E 1 HETATM 72 H H92 LMT . . . N 9 5.126 0.686 -17.656 1 171.75 ? H92 LMT 201 E 1 HETATM 73 H H91 LMT . . . N 9 6.354 1.28 -16.944 1 171.75 ? H91 LMT 201 E 1 HETATM 74 H H102 LMT . . . N 9 4.648 -0.178 -15.289 1 211.64 ? H102 LMT 201 E 1 HETATM 75 H H101 LMT . . . N 9 4.049 1.143 -15.803 1 211.64 ? H101 LMT 201 E 1 HETATM 76 H H112 LMT . . . N 9 6.444 0.979 -14.311 1 186.64 ? H112 LMT 201 E 1 HETATM 77 H H111 LMT . . . N 9 5.092 1.478 -13.73 1 186.64 ? H111 LMT 201 E 1 HETATM 78 H H123 LMT . . . N 9 6.088 3.436 -14.193 1 172.75 ? H123 LMT 201 E 1 HETATM 79 H H122 LMT . . . N 9 5.26 3.238 -15.504 1 172.75 ? H122 LMT 201 E 1 HETATM 80 H H121 LMT . . . N 9 6.781 2.882 -15.48 1 172.75 ? H121 LMT 201 E 1 # _model_server_stats.io_time_ms 149 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 28 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 80 #