data_8ACW # _model_server_result.job_id QoWrmYJsf_lTme_4DqLcsQ _model_server_result.datetime_utc '2025-01-11 15:42:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8acw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":503}' # _entry.id 8ACW # _exptl.entry_id 8ACW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 510.615 _entity.id 9 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECYL-BETA-D-MALTOSIDE _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.93 _cell.angle_gamma 90 _cell.entry_id 8ACW _cell.length_a 93.72 _cell.length_b 142.94 _cell.length_c 103.39 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8ACW _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 9 I N N ? 9 L N N ? 9 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B OG1 THR 236 B THR 236 1_555 G P FMN . B FMN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.597 ? covale ? covale2 C OG1 THR 225 C THR 225 1_555 K P FMN . C FMN 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.604 ? metalc ? metalc1 B O ILE 371 B ILE 371 1_555 J K K . B K 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.362 ? metalc ? metalc2 B O ARG 372 B ARG 372 1_555 J K K . B K 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.427 ? metalc ? metalc3 B O ASN 375 B ASN 375 1_555 J K K . B K 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.78 ? metalc ? metalc4 B O TYR 378 B TYR 378 1_555 J K K . B K 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? metalc ? metalc5 D SG CYS 29 D CYS 29 1_555 O FE2 FES . E FES 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc6 D SG CYS 112 D CYS 112 1_555 O FE1 FES . E FES 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? metalc ? metalc7 E SG CYS 26 E CYS 26 1_555 O FE1 FES . E FES 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? metalc ? metalc8 E SG CYS 120 E CYS 120 1_555 O FE2 FES . E FES 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc9 F SG CYS 70 F CYS 70 1_555 Q FE1 FES . F FES 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc10 F SG CYS 76 F CYS 76 1_555 Q FE1 FES . F FES 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc11 F SG CYS 79 F CYS 79 1_555 Q FE2 FES . F FES 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc12 F SG CYS 111 F CYS 111 1_555 Q FE2 FES . F FES 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? # _chem_comp.formula 'C24 H46 O11' _chem_comp.formula_weight 510.615 _chem_comp.id LMT _chem_comp.mon_nstd_flag . _chem_comp.name DODECYL-BETA-D-MALTOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1B C2B LMT sing 341 n n C1B O1B LMT sing 342 n n C1B O5B LMT sing 343 n n C1B H1B LMT sing 344 n n C2B C3B LMT sing 345 n n C2B O2B LMT sing 346 n n C2B H2B LMT sing 347 n n C3B C4B LMT sing 348 n n C3B O3B LMT sing 349 n n C3B H3B LMT sing 350 n n C4B C5B LMT sing 351 n n C4B O4' LMT sing 352 n n C4B H4B LMT sing 353 n n C5B C6B LMT sing 354 n n C5B O5B LMT sing 355 n n C5B H5B LMT sing 356 n n C6B O6B LMT sing 357 n n C6B "H6'2" LMT sing 358 n n C6B "H6'1" LMT sing 359 n n O1B C4' LMT sing 360 n n O2B H2O1 LMT sing 361 n n O3B H3O1 LMT sing 362 n n O4' H4O1 LMT sing 363 n n O6B H6B LMT sing 364 n n C1' C2' LMT sing 365 n n C1' O1' LMT sing 366 n n C1' O5' LMT sing 367 n n C1' H1' LMT sing 368 n n C2' C3' LMT sing 369 n n C2' O2' LMT sing 370 n n C2' H2' LMT sing 371 n n C3' C4' LMT sing 372 n n C3' O3' LMT sing 373 n n C3' H3' LMT sing 374 n n C4' C5' LMT sing 375 n n C4' H4' LMT sing 376 n n C5' C6' LMT sing 377 n n C5' O5' LMT sing 378 n n C5' H5' LMT sing 379 n n C6' O6' LMT sing 380 n n C6' H6D LMT sing 381 n n C6' H6E LMT sing 382 n n O1' C1 LMT sing 383 n n O2' H2O2 LMT sing 384 n n O3' H3O2 LMT sing 385 n n O6' H6' LMT sing 386 n n C1 C2 LMT sing 387 n n C1 H12 LMT sing 388 n n C1 H11 LMT sing 389 n n C2 C3 LMT sing 390 n n C2 H22 LMT sing 391 n n C2 H21 LMT sing 392 n n C3 C4 LMT sing 393 n n C3 H32 LMT sing 394 n n C3 H31 LMT sing 395 n n C4 C5 LMT sing 396 n n C4 H42 LMT sing 397 n n C4 H41 LMT sing 398 n n C5 C6 LMT sing 399 n n C5 H52 LMT sing 400 n n C5 H51 LMT sing 401 n n C6 C7 LMT sing 402 n n C6 H62 LMT sing 403 n n C6 H61 LMT sing 404 n n C7 C8 LMT sing 405 n n C7 H72 LMT sing 406 n n C7 H71 LMT sing 407 n n C8 C9 LMT sing 408 n n C8 H82 LMT sing 409 n n C8 H81 LMT sing 410 n n C9 C10 LMT sing 411 n n C9 H92 LMT sing 412 n n C9 H91 LMT sing 413 n n C10 C11 LMT sing 414 n n C10 H102 LMT sing 415 n n C10 H101 LMT sing 416 n n C11 C12 LMT sing 417 n n C11 H112 LMT sing 418 n n C11 H111 LMT sing 419 n n C12 H123 LMT sing 420 n n C12 H122 LMT sing 421 n n C12 H121 LMT sing 422 n n # _atom_sites.entry_id 8ACW _atom_sites.fract_transf_matrix[1][1] 0.01067 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003869 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006996 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010288 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 7 FMN B 1 501 600 FMN FMN . H 8 RBF B 1 502 601 RBF RBF . I 9 LMT B 1 503 605 LMT LMT . J 10 K B 1 504 1 K K . K 7 FMN C 1 1000 1000 FMN FMN . L 9 LMT D 1 301 604 LMT LMT . M 11 LYS D 1 302 209 LYS LYS . N 9 LMT E 1 201 603 LMT LMT . O 12 FES E 1 202 1001 FES FES . P 13 FAD F 1 1501 1501 FAD FAD . Q 12 FES F 1 1502 1502 FES FES . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1B LMT . . . I 9 8.235 0.587 13.02 1 173.38 ? C1B LMT 503 B 1 HETATM 2 C C2B LMT . . . I 9 7.869 1.937 12.384 1 183.45 ? C2B LMT 503 B 1 HETATM 3 C C3B LMT . . . I 9 9.024 2.943 12.559 1 157.63 ? C3B LMT 503 B 1 HETATM 4 C C4B LMT . . . I 9 10.389 2.219 12.542 1 130.51 ? C4B LMT 503 B 1 HETATM 5 C C5B LMT . . . I 9 10.248 0.887 11.813 1 119.79 ? C5B LMT 503 B 1 HETATM 6 C C6B LMT . . . I 9 11.635 0.219 11.749 1 127.78 ? C6B LMT 503 B 1 HETATM 7 O O1B LMT . . . I 9 7.13 -0.286 13.034 1 184.47 ? O1B LMT 503 B 1 HETATM 8 O O2B LMT . . . I 9 7.639 1.757 11.049 1 219.54 ? O2B LMT 503 B 1 HETATM 9 O O3B LMT . . . I 9 8.864 3.724 13.675 1 178.79 ? O3B LMT 503 B 1 HETATM 10 O O4' LMT . . . I 9 11.319 2.998 11.868 1 147.66 ? O4' LMT 503 B 1 HETATM 11 O O5B LMT . . . I 9 9.332 -0.012 12.391 1 187.67 ? O5B LMT 503 B 1 HETATM 12 O O6B LMT . . . I 9 11.527 -1.057 11.291 1 172.28 ? O6B LMT 503 B 1 HETATM 13 C C1' LMT . . . I 9 5.104 -2.871 10.492 1 189.46 ? C1' LMT 503 B 1 HETATM 14 C C2' LMT . . . I 9 6.521 -2.517 10.026 1 177.57 ? C2' LMT 503 B 1 HETATM 15 C C3' LMT . . . I 9 7.323 -1.852 11.186 1 166.19 ? C3' LMT 503 B 1 HETATM 16 C C4' LMT . . . I 9 6.526 -0.699 11.822 1 185.58 ? C4' LMT 503 B 1 HETATM 17 C C5' LMT . . . I 9 5.162 -1.333 12.193 1 167.53 ? C5' LMT 503 B 1 HETATM 18 C C6' LMT . . . I 9 4.26 -0.481 13.048 1 195.98 ? C6' LMT 503 B 1 HETATM 19 O O1' LMT . . . I 9 4.324 -3.267 9.445 1 210.51 ? O1' LMT 503 B 1 HETATM 20 O O2' LMT . . . I 9 7.149 -3.674 9.659 1 189.65 ? O2' LMT 503 B 1 HETATM 21 O O3' LMT . . . I 9 8.513 -1.396 10.713 1 143.82 ? O3' LMT 503 B 1 HETATM 22 O O5' LMT . . . I 9 4.484 -1.717 11.035 1 161.94 ? O5' LMT 503 B 1 HETATM 23 O O6' LMT . . . I 9 3.175 -1.268 13.351 1 190.88 ? O6' LMT 503 B 1 HETATM 24 C C1 LMT . . . I 9 4.251 -4.633 9.375 1 192.64 ? C1 LMT 503 B 1 HETATM 25 C C2 LMT . . . I 9 4.184 -5.165 7.962 1 182.11 ? C2 LMT 503 B 1 HETATM 26 C C3 LMT . . . I 9 3.037 -4.757 7.092 1 178.31 ? C3 LMT 503 B 1 HETATM 27 C C4 LMT . . . I 9 1.74 -5.066 7.828 1 154.29 ? C4 LMT 503 B 1 HETATM 28 C C5 LMT . . . I 9 0.59 -5.141 6.896 1 163.23 ? C5 LMT 503 B 1 HETATM 29 C C6 LMT . . . I 9 -0.652 -5.743 7.508 1 196.77 ? C6 LMT 503 B 1 HETATM 30 C C7 LMT . . . I 9 -1.729 -5.644 6.456 1 162.1 ? C7 LMT 503 B 1 HETATM 31 C C8 LMT . . . I 9 -2.903 -4.749 6.638 1 163.32 ? C8 LMT 503 B 1 HETATM 32 C C9 LMT . . . I 9 -4.195 -5.53 6.746 1 192.1 ? C9 LMT 503 B 1 HETATM 33 C C10 LMT . . . I 9 -4.44 -6.304 5.456 1 183.65 ? C10 LMT 503 B 1 HETATM 34 C C11 LMT . . . I 9 -5.336 -7.498 5.693 1 183.83 ? C11 LMT 503 B 1 HETATM 35 C C12 LMT . . . I 9 -4.853 -8.747 5.017 1 189.51 ? C12 LMT 503 B 1 HETATM 36 H H1B LMT . . . I 9 8.549 0.805 13.911 1 208.38 ? H1B LMT 503 B 1 HETATM 37 H H2B LMT . . . I 9 7.093 2.248 12.876 1 220.46 ? H2B LMT 503 B 1 HETATM 38 H H3B LMT . . . I 9 8.981 3.526 11.785 1 189.48 ? H3B LMT 503 B 1 HETATM 39 H H4B LMT . . . I 9 10.622 1.998 13.458 1 156.93 ? H4B LMT 503 B 1 HETATM 40 H H5B LMT . . . I 9 9.928 1.1 10.923 1 144.07 ? H5B LMT 503 B 1 HETATM 41 H "H6'2" LMT . . . I 9 12.049 0.283 12.624 1 153.66 ? "H6'2" LMT 503 B 1 HETATM 42 H "H6'1" LMT . . . I 9 12.22 0.775 11.211 1 153.66 ? "H6'1" LMT 503 B 1 HETATM 43 H H2O1 LMT . . . I 9 7.312 2.485 10.754 1 263.77 ? H2O1 LMT 503 B 1 HETATM 44 H H3O1 LMT . . . I 9 9.518 4.27 13.694 1 214.87 ? H3O1 LMT 503 B 1 HETATM 45 H H4O1 LMT . . . I 9 12.062 2.91 12.269 1 177.51 ? H4O1 LMT 503 B 1 HETATM 46 H H6B LMT . . . I 9 10.692 -1.21 11.262 1 207.05 ? H6B LMT 503 B 1 HETATM 47 H H1' LMT . . . I 9 5.194 -3.548 11.181 1 227.67 ? H1' LMT 503 B 1 HETATM 48 H H2' LMT . . . I 9 6.44 -1.864 9.313 1 213.41 ? H2' LMT 503 B 1 HETATM 49 H H3' LMT . . . I 9 7.409 -2.516 11.888 1 199.75 ? H3' LMT 503 B 1 HETATM 50 H H4' LMT . . . I 9 6.439 0.015 11.17 1 223.02 ? H4' LMT 503 B 1 HETATM 51 H H5' LMT . . . I 9 5.397 -2.097 12.742 1 201.36 ? H5' LMT 503 B 1 HETATM 52 H H6D LMT . . . I 9 4.045 0.34 12.577 1 235.49 ? H6D LMT 503 B 1 HETATM 53 H H6E LMT . . . I 9 4.753 -0.158 13.819 1 235.49 ? H6E LMT 503 B 1 HETATM 54 H H2O2 LMT . . . I 9 7.931 -3.45 9.423 1 227.9 ? H2O2 LMT 503 B 1 HETATM 55 H H6' LMT . . . I 9 3.111 -1.831 12.718 1 229.38 ? H6' LMT 503 B 1 HETATM 56 H H12 LMT . . . I 9 3.485 -4.931 9.89 1 231.49 ? H12 LMT 503 B 1 HETATM 57 H H11 LMT . . . I 9 5.01 -5.011 9.847 1 231.49 ? H11 LMT 503 B 1 HETATM 58 H H22 LMT . . . I 9 4.194 -6.134 8.009 1 218.85 ? H22 LMT 503 B 1 HETATM 59 H H21 LMT . . . I 9 5.006 -4.914 7.512 1 218.85 ? H21 LMT 503 B 1 HETATM 60 H H32 LMT . . . I 9 3.05 -5.222 6.241 1 214.29 ? H32 LMT 503 B 1 HETATM 61 H H31 LMT . . . I 9 3.073 -3.813 6.873 1 214.29 ? H31 LMT 503 B 1 HETATM 62 H H42 LMT . . . I 9 1.576 -4.392 8.507 1 185.47 ? H42 LMT 503 B 1 HETATM 63 H H41 LMT . . . I 9 1.827 -5.898 8.318 1 185.47 ? H41 LMT 503 B 1 HETATM 64 H H52 LMT . . . I 9 0.852 -5.655 6.116 1 196.2 ? H52 LMT 503 B 1 HETATM 65 H H51 LMT . . . I 9 0.393 -4.249 6.569 1 196.2 ? H51 LMT 503 B 1 HETATM 66 H H62 LMT . . . I 9 -0.91 -5.283 8.323 1 236.45 ? H62 LMT 503 B 1 HETATM 67 H H61 LMT . . . I 9 -0.508 -6.663 7.781 1 236.45 ? H61 LMT 503 B 1 HETATM 68 H H72 LMT . . . I 9 -2.058 -6.544 6.307 1 194.84 ? H72 LMT 503 B 1 HETATM 69 H H71 LMT . . . I 9 -1.288 -5.394 5.628 1 194.84 ? H71 LMT 503 B 1 HETATM 70 H H82 LMT . . . I 9 -2.962 -4.12 5.902 1 196.31 ? H82 LMT 503 B 1 HETATM 71 H H81 LMT . . . I 9 -2.785 -4.2 7.429 1 196.31 ? H81 LMT 503 B 1 HETATM 72 H H92 LMT . . . I 9 -4.936 -4.933 6.932 1 230.84 ? H92 LMT 503 B 1 HETATM 73 H H91 LMT . . . I 9 -4.162 -6.134 7.505 1 230.84 ? H91 LMT 503 B 1 HETATM 74 H H102 LMT . . . I 9 -3.593 -6.584 5.077 1 220.7 ? H102 LMT 503 B 1 HETATM 75 H H101 LMT . . . I 9 -4.828 -5.715 4.791 1 220.7 ? H101 LMT 503 B 1 HETATM 76 H H112 LMT . . . I 9 -6.23 -7.287 5.382 1 220.92 ? H112 LMT 503 B 1 HETATM 77 H H111 LMT . . . I 9 -5.407 -7.654 6.648 1 220.92 ? H111 LMT 503 B 1 HETATM 78 H H123 LMT . . . I 9 -5.473 -9.482 5.143 1 227.74 ? H123 LMT 503 B 1 HETATM 79 H H122 LMT . . . I 9 -3.993 -9.03 5.365 1 227.74 ? H122 LMT 503 B 1 HETATM 80 H H121 LMT . . . I 9 -4.75 -8.617 4.061 1 227.74 ? H121 LMT 503 B 1 # _model_server_stats.io_time_ms 41 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 50 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 80 #