data_8ACY
#
_model_server_result.job_id            byvyHfZjvpr4RGGbu0IeWw 
_model_server_result.datetime_utc      '2024-12-26 11:34:33' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8acy 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":501}' 
#
_entry.id    8ACY 
#
_exptl.entry_id    8ACY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              456.344 
_entity.id                          7 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN MONONUCLEOTIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          110.98 
_cell.angle_gamma         90 
_cell.entry_id            8ACY 
_cell.length_a            95.27 
_cell.length_b            143.32 
_cell.length_c            104.37 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8ACY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 7 G N N 
? 7 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 B OG1 THR 236 B THR 236 1_555 G P FMN . B FMN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.59 ? 
covale ? covale2 C OG1 THR 225 C THR 225 1_555 L P FMN . C FMN 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.601 ? 
metalc ? metalc1 B O ILE 371 B ILE 371 1_555 K NA NA . B NA 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.73 ? 
metalc ? metalc2 B O ARG 372 B ARG 372 1_555 K NA NA . B NA 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.725 ? 
metalc ? metalc3 B O ASN 375 B ASN 375 1_555 K NA NA . B NA 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? 
metalc ? metalc4 B O TYR 378 B TYR 378 1_555 K NA NA . B NA 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? 
metalc ? metalc5 D SG CYS 29 D CYS 29 1_555 N FE2 FES . E FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? 
metalc ? metalc6 D SG CYS 112 D CYS 112 1_555 N FE1 FES . E FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? 
metalc ? metalc7 E SG CYS 26 E CYS 26 1_555 N FE1 FES . E FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? 
metalc ? metalc8 E SG CYS 120 E CYS 120 1_555 N FE2 FES . E FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? 
metalc ? metalc9 F SG CYS 70 F CYS 70 1_555 P FE1 FES . F FES 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? 
metalc ? metalc10 F SG CYS 76 F CYS 76 1_555 P FE1 FES . F FES 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? 
metalc ? metalc11 F SG CYS 79 F CYS 79 1_555 P FE2 FES . F FES 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? 
metalc ? metalc12 F SG CYS 111 F CYS 111 1_555 P FE2 FES . F FES 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? 
#
_chem_comp.formula           'C17 H21 N4 O9 P' 
_chem_comp.formula_weight    456.344 
_chem_comp.id                FMN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN MONONUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'RIBOFLAVIN MONOPHOSPHATE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 FMN sing 178 n n 
N1 C10 FMN doub 179 n n 
C2 O2 FMN doub 180 n n 
C2 N3 FMN sing 181 n n 
N3 C4 FMN sing 182 n n 
N3 HN3 FMN sing 183 n n 
C4 O4 FMN doub 184 n n 
C4 C4A FMN sing 185 n n 
C4A N5 FMN doub 186 n n 
C4A C10 FMN sing 187 n n 
N5 C5A FMN sing 188 n n 
C5A C6 FMN doub 189 n y 
C5A C9A FMN sing 190 n y 
C6 C7 FMN sing 191 n y 
C6 H6 FMN sing 192 n n 
C7 C7M FMN sing 193 n n 
C7 C8 FMN doub 194 n y 
C7M HM71 FMN sing 195 n n 
C7M HM72 FMN sing 196 n n 
C7M HM73 FMN sing 197 n n 
C8 C8M FMN sing 198 n n 
C8 C9 FMN sing 199 n y 
C8M HM81 FMN sing 200 n n 
C8M HM82 FMN sing 201 n n 
C8M HM83 FMN sing 202 n n 
C9 C9A FMN doub 203 n y 
C9 H9 FMN sing 204 n n 
C9A N10 FMN sing 205 n n 
N10 C10 FMN sing 206 n n 
N10 C1' FMN sing 207 n n 
C1' C2' FMN sing 208 n n 
C1' "H1'1" FMN sing 209 n n 
C1' "H1'2" FMN sing 210 n n 
C2' O2' FMN sing 211 n n 
C2' C3' FMN sing 212 n n 
C2' H2' FMN sing 213 n n 
O2' HO2' FMN sing 214 n n 
C3' O3' FMN sing 215 n n 
C3' C4' FMN sing 216 n n 
C3' H3' FMN sing 217 n n 
O3' HO3' FMN sing 218 n n 
C4' O4' FMN sing 219 n n 
C4' C5' FMN sing 220 n n 
C4' H4' FMN sing 221 n n 
O4' HO4' FMN sing 222 n n 
C5' O5' FMN sing 223 n n 
C5' "H5'1" FMN sing 224 n n 
C5' "H5'2" FMN sing 225 n n 
O5' P FMN sing 226 n n 
P O1P FMN doub 227 n n 
P O2P FMN sing 228 n n 
P O3P FMN sing 229 n n 
O2P HOP2 FMN sing 230 n n 
O3P HOP3 FMN sing 231 n n 
#
_atom_sites.entry_id                     8ACY 
_atom_sites.fract_transf_matrix[1][1]    0.010496 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004025 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006977 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010262 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 7 FMN B 1 501 600 FMN FMN . 
H 8 RBF B 1 502 601 RBF RBF . 
I 9 LMT B 1 503 603 LMT LMT . 
J 9 LMT B 1 504 605 LMT LMT . 
K 10 NA B 1 505 1 NA NA . 
L 7 FMN C 1 1000 1000 FMN FMN . 
M 9 LMT D 1 301 604 LMT LMT . 
N 11 FES E 1 1001 1001 FES FES . 
O 12 FAD F 1 1501 1501 FAD FAD . 
P 11 FES F 1 1502 1502 FES FES . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 FMN . . . G 7 -0.834 17.965 -1.757 1 151.41 ? N1 FMN 501 B 1 
HETATM 2 C C2 FMN . . . G 7 0.386 18.177 -2.366 1 149.35 ? C2 FMN 501 B 1 
HETATM 3 O O2 FMN . . . G 7 1.122 19.061 -1.928 1 161.49 ? O2 FMN 501 B 1 
HETATM 4 N N3 FMN . . . G 7 0.762 17.404 -3.449 1 145.47 ? N3 FMN 501 B 1 
HETATM 5 C C4 FMN . . . G 7 -0.098 16.42 -3.911 1 150.79 ? C4 FMN 501 B 1 
HETATM 6 O O4 FMN . . . G 7 0.216 15.719 -4.872 1 147.59 ? O4 FMN 501 B 1 
HETATM 7 C C4A FMN . . . G 7 -1.331 16.21 -3.292 1 151.96 ? C4A FMN 501 B 1 
HETATM 8 N N5 FMN . . . G 7 -2.193 15.232 -3.747 1 148.3 ? N5 FMN 501 B 1 
HETATM 9 C C5A FMN . . . G 7 -3.411 15.034 -3.126 1 148.61 ? C5A FMN 501 B 1 
HETATM 10 C C6 FMN . . . G 7 -4.272 14.051 -3.59 1 152.85 ? C6 FMN 501 B 1 
HETATM 11 C C7 FMN . . . G 7 -5.497 13.84 -2.97 1 158.1 ? C7 FMN 501 B 1 
HETATM 12 C C7M FMN . . . G 7 -6.402 12.77 -3.502 1 163.19 ? C7M FMN 501 B 1 
HETATM 13 C C8 FMN . . . G 7 -5.869 14.628 -1.883 1 155.77 ? C8 FMN 501 B 1 
HETATM 14 C C8M FMN . . . G 7 -7.178 14.453 -1.172 1 151.1 ? C8M FMN 501 B 1 
HETATM 15 C C9 FMN . . . G 7 -5.006 15.606 -1.424 1 152.56 ? C9 FMN 501 B 1 
HETATM 16 C C9A FMN . . . G 7 -3.781 15.814 -2.042 1 148.36 ? C9A FMN 501 B 1 
HETATM 17 N N10 FMN . . . G 7 -2.911 16.78 -1.574 1 154.44 ? N10 FMN 501 B 1 
HETATM 18 C C10 FMN . . . G 7 -1.71 17.003 -2.221 1 153.14 ? C10 FMN 501 B 1 
HETATM 19 C C1' FMN . . . G 7 -3.294 17.652 -0.42 1 162.98 ? C1' FMN 501 B 1 
HETATM 20 C C2' FMN . . . G 7 -2.714 16.944 0.79 1 156.28 ? C2' FMN 501 B 1 
HETATM 21 O O2' FMN . . . G 7 -3.292 15.658 0.878 1 159.86 ? O2' FMN 501 B 1 
HETATM 22 C C3' FMN . . . G 7 -2.979 17.666 2.102 1 156.19 ? C3' FMN 501 B 1 
HETATM 23 O O3' FMN . . . G 7 -4.338 17.981 2.235 1 155.82 ? O3' FMN 501 B 1 
HETATM 24 C C4' FMN . . . G 7 -2.096 18.907 2.064 1 170.59 ? C4' FMN 501 B 1 
HETATM 25 O O4' FMN . . . G 7 -0.782 18.601 1.624 1 171.12 ? O4' FMN 501 B 1 
HETATM 26 C C5' FMN . . . G 7 -1.97 19.655 3.379 1 174.49 ? C5' FMN 501 B 1 
HETATM 27 O O5' FMN . . . G 7 -1.644 18.565 4.191 1 178.06 ? O5' FMN 501 B 1 
HETATM 28 P P FMN . . . G 7 -0.124 18.466 4.67 1 177.6 ? P FMN 501 B 1 
HETATM 29 O O1P FMN . . . G 7 0.03 17.062 5.164 1 180.93 ? O1P FMN 501 B 1 
HETATM 30 O O2P FMN . . . G 7 0.799 18.826 3.526 1 181.66 ? O2P FMN 501 B 1 
HETATM 31 H HN3 FMN . . . G 7 1.681 17.559 -3.912 1 174.56 ? HN3 FMN 501 B 1 
HETATM 32 H H6 FMN . . . G 7 -3.986 13.439 -4.446 1 183.43 ? H6 FMN 501 B 1 
HETATM 33 H HM71 FMN . . . G 7 -7.433 12.998 -3.231 1 195.83 ? HM71 FMN 501 B 1 
HETATM 34 H HM72 FMN . . . G 7 -6.118 11.808 -3.075 1 195.83 ? HM72 FMN 501 B 1 
HETATM 35 H HM73 FMN . . . G 7 -6.314 12.726 -4.588 1 195.83 ? HM73 FMN 501 B 1 
HETATM 36 H HM81 FMN . . . G 7 -7.204 15.098 -0.294 1 181.32 ? HM81 FMN 501 B 1 
HETATM 37 H HM82 FMN . . . G 7 -7.287 13.414 -0.862 1 181.32 ? HM82 FMN 501 B 1 
HETATM 38 H HM83 FMN . . . G 7 -7.994 14.719 -1.843 1 181.32 ? HM83 FMN 501 B 1 
HETATM 39 H H9 FMN . . . G 7 -5.291 16.219 -0.57 1 183.08 ? H9 FMN 501 B 1 
HETATM 40 H "H1'1" FMN . . . G 7 -4.376 17.748 -0.339 1 195.58 ? "H1'1" FMN 501 B 1 
HETATM 41 H "H1'2" FMN . . . G 7 -2.876 18.653 -0.527 1 195.58 ? "H1'2" FMN 501 B 1 
HETATM 42 H H2' FMN . . . G 7 -1.634 16.904 0.648 1 187.53 ? H2' FMN 501 B 1 
HETATM 43 H HO2' FMN . . . G 7 -3.883 15.618 1.658 1 191.84 ? HO2' FMN 501 B 1 
HETATM 44 H H3' FMN . . . G 7 -2.748 17.049 2.971 1 187.43 ? H3' FMN 501 B 1 
HETATM 45 H HO3' FMN . . . G 7 -4.429 18.897 2.572 1 186.98 ? HO3' FMN 501 B 1 
HETATM 46 H H4' FMN . . . G 7 -2.611 19.558 1.357 1 204.71 ? H4' FMN 501 B 1 
HETATM 47 H HO4' FMN . . . G 7 -0.145 19.216 2.043 1 205.35 ? HO4' FMN 501 B 1 
HETATM 48 H "H5'1" FMN . . . G 7 -2.899 20.14 3.678 1 209.39 ? "H5'1" FMN 501 B 1 
HETATM 49 H "H5'2" FMN . . . G 7 -1.188 20.414 3.359 1 209.39 ? "H5'2" FMN 501 B 1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    30 
_model_server_stats.query_time_ms           348 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           49 
#