data_8AD7
#
_model_server_result.job_id            EmKAr75guezmZEiKAC4kJQ 
_model_server_result.datetime_utc      '2024-11-14 06:43:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8ad7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":606}' 
#
_entry.id    8AD7 
#
_exptl.entry_id    8AD7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8AD7 
_cell.length_a            138.91 
_cell.length_b            138.91 
_cell.length_c            142.59 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8AD7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        172 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 64' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 K N N 
? 3 L N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 157 n n 
C1 C2 GOL sing 158 n n 
C1 H11 GOL sing 159 n n 
C1 H12 GOL sing 160 n n 
O1 HO1 GOL sing 161 n n 
C2 O2 GOL sing 162 n n 
C2 C3 GOL sing 163 n n 
C2 H2 GOL sing 164 n n 
O2 HO2 GOL sing 165 n n 
C3 O3 GOL sing 166 n n 
C3 H31 GOL sing 167 n n 
C3 H32 GOL sing 168 n n 
O3 HO3 GOL sing 169 n n 
#
_atom_sites.entry_id                     8AD7 
_atom_sites.fract_transf_matrix[1][1]    0.007199 
_atom_sites.fract_transf_matrix[1][2]    0.004156 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008313 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007013 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 PO4 A 1 601 601 PO4 PO4 . 
D 2 PO4 A 1 602 602 PO4 PO4 . 
E 2 PO4 A 1 603 603 PO4 PO4 . 
F 3 GOL A 1 604 604 GOL GOL . 
G 3 GOL A 1 605 605 GOL GOL . 
H 3 GOL A 1 606 606 GOL GOL . 
I 3 GOL A 1 607 607 GOL GOL . 
J 4 DTR A 1 608 608 DTR DTR . 
K 3 GOL B 1 601 601 GOL GOL . 
L 3 GOL B 1 602 602 GOL GOL . 
M 5 HOH A 1 701 701 HOH HOH . 
M 5 HOH A 2 702 702 HOH HOH . 
M 5 HOH A 3 703 703 HOH HOH . 
M 5 HOH A 4 704 704 HOH HOH . 
M 5 HOH A 5 705 705 HOH HOH . 
M 5 HOH A 6 706 706 HOH HOH . 
M 5 HOH A 7 707 707 HOH HOH . 
M 5 HOH A 8 708 708 HOH HOH . 
M 5 HOH A 9 709 709 HOH HOH . 
M 5 HOH A 10 710 710 HOH HOH . 
M 5 HOH A 11 711 711 HOH HOH . 
M 5 HOH A 12 712 712 HOH HOH . 
M 5 HOH A 13 713 713 HOH HOH . 
M 5 HOH A 14 714 714 HOH HOH . 
M 5 HOH A 15 715 715 HOH HOH . 
M 5 HOH A 16 716 716 HOH HOH . 
M 5 HOH A 17 717 717 HOH HOH . 
M 5 HOH A 18 718 718 HOH HOH . 
M 5 HOH A 19 719 719 HOH HOH . 
M 5 HOH A 20 720 720 HOH HOH . 
M 5 HOH A 21 721 721 HOH HOH . 
M 5 HOH A 22 722 722 HOH HOH . 
M 5 HOH A 23 723 723 HOH HOH . 
M 5 HOH A 24 724 724 HOH HOH . 
M 5 HOH A 25 725 725 HOH HOH . 
M 5 HOH A 26 726 726 HOH HOH . 
M 5 HOH A 27 727 727 HOH HOH . 
M 5 HOH A 28 728 728 HOH HOH . 
M 5 HOH A 29 729 729 HOH HOH . 
M 5 HOH A 30 730 730 HOH HOH . 
M 5 HOH A 31 731 731 HOH HOH . 
M 5 HOH A 32 732 732 HOH HOH . 
M 5 HOH A 33 733 733 HOH HOH . 
M 5 HOH A 34 734 734 HOH HOH . 
M 5 HOH A 35 735 735 HOH HOH . 
M 5 HOH A 36 736 736 HOH HOH . 
M 5 HOH A 37 737 737 HOH HOH . 
M 5 HOH A 38 738 738 HOH HOH . 
M 5 HOH A 39 739 739 HOH HOH . 
M 5 HOH A 40 740 740 HOH HOH . 
M 5 HOH A 41 741 741 HOH HOH . 
M 5 HOH A 42 742 742 HOH HOH . 
M 5 HOH A 43 743 743 HOH HOH . 
M 5 HOH A 44 744 744 HOH HOH . 
M 5 HOH A 45 745 745 HOH HOH . 
M 5 HOH A 46 746 746 HOH HOH . 
M 5 HOH A 47 747 747 HOH HOH . 
M 5 HOH A 48 748 748 HOH HOH . 
M 5 HOH A 49 749 749 HOH HOH . 
M 5 HOH A 50 750 750 HOH HOH . 
M 5 HOH A 51 751 751 HOH HOH . 
M 5 HOH A 52 752 752 HOH HOH . 
M 5 HOH A 53 753 753 HOH HOH . 
M 5 HOH A 54 754 754 HOH HOH . 
M 5 HOH A 55 755 755 HOH HOH . 
M 5 HOH A 56 756 756 HOH HOH . 
M 5 HOH A 57 757 757 HOH HOH . 
M 5 HOH A 58 758 758 HOH HOH . 
M 5 HOH A 59 759 759 HOH HOH . 
M 5 HOH A 60 760 760 HOH HOH . 
M 5 HOH A 61 761 761 HOH HOH . 
M 5 HOH A 62 762 762 HOH HOH . 
M 5 HOH A 63 763 763 HOH HOH . 
M 5 HOH A 64 764 764 HOH HOH . 
M 5 HOH A 65 765 765 HOH HOH . 
M 5 HOH A 66 766 766 HOH HOH . 
M 5 HOH A 67 767 767 HOH HOH . 
M 5 HOH A 68 768 768 HOH HOH . 
M 5 HOH A 69 769 769 HOH HOH . 
M 5 HOH A 70 770 770 HOH HOH . 
M 5 HOH A 71 771 771 HOH HOH . 
M 5 HOH A 72 772 772 HOH HOH . 
M 5 HOH A 73 773 773 HOH HOH . 
M 5 HOH A 74 774 774 HOH HOH . 
M 5 HOH A 75 775 775 HOH HOH . 
M 5 HOH A 76 776 776 HOH HOH . 
M 5 HOH A 77 777 777 HOH HOH . 
M 5 HOH A 78 778 778 HOH HOH . 
M 5 HOH A 79 779 779 HOH HOH . 
M 5 HOH A 80 780 780 HOH HOH . 
M 5 HOH A 81 781 781 HOH HOH . 
M 5 HOH A 82 782 782 HOH HOH . 
M 5 HOH A 83 783 783 HOH HOH . 
M 5 HOH A 84 784 784 HOH HOH . 
M 5 HOH A 85 785 785 HOH HOH . 
M 5 HOH A 86 786 786 HOH HOH . 
M 5 HOH A 87 787 787 HOH HOH . 
M 5 HOH A 88 788 788 HOH HOH . 
M 5 HOH A 89 789 789 HOH HOH . 
M 5 HOH A 90 790 790 HOH HOH . 
M 5 HOH A 91 791 791 HOH HOH . 
M 5 HOH A 92 792 792 HOH HOH . 
M 5 HOH A 93 793 793 HOH HOH . 
M 5 HOH A 94 794 794 HOH HOH . 
M 5 HOH A 95 795 795 HOH HOH . 
M 5 HOH A 96 796 796 HOH HOH . 
M 5 HOH A 97 797 797 HOH HOH . 
M 5 HOH A 98 798 798 HOH HOH . 
M 5 HOH A 99 799 799 HOH HOH . 
M 5 HOH A 100 800 800 HOH HOH . 
M 5 HOH A 101 801 801 HOH HOH . 
M 5 HOH A 102 802 802 HOH HOH . 
M 5 HOH A 103 803 803 HOH HOH . 
M 5 HOH A 104 804 804 HOH HOH . 
M 5 HOH A 105 805 805 HOH HOH . 
M 5 HOH A 106 806 806 HOH HOH . 
M 5 HOH A 107 807 807 HOH HOH . 
M 5 HOH A 108 808 808 HOH HOH . 
M 5 HOH A 109 809 809 HOH HOH . 
M 5 HOH A 110 810 810 HOH HOH . 
M 5 HOH A 111 811 811 HOH HOH . 
M 5 HOH A 112 812 812 HOH HOH . 
M 5 HOH A 113 813 813 HOH HOH . 
M 5 HOH A 114 814 814 HOH HOH . 
M 5 HOH A 115 815 815 HOH HOH . 
M 5 HOH A 116 816 816 HOH HOH . 
M 5 HOH A 117 817 817 HOH HOH . 
M 5 HOH A 118 818 818 HOH HOH . 
M 5 HOH A 119 819 819 HOH HOH . 
M 5 HOH A 120 820 820 HOH HOH . 
M 5 HOH A 121 821 821 HOH HOH . 
M 5 HOH A 122 822 822 HOH HOH . 
M 5 HOH A 123 823 823 HOH HOH . 
M 5 HOH A 124 824 824 HOH HOH . 
M 5 HOH A 125 825 825 HOH HOH . 
M 5 HOH A 126 826 826 HOH HOH . 
M 5 HOH A 127 827 827 HOH HOH . 
M 5 HOH A 128 828 828 HOH HOH . 
M 5 HOH A 129 829 829 HOH HOH . 
M 5 HOH A 130 830 830 HOH HOH . 
M 5 HOH A 131 831 831 HOH HOH . 
M 5 HOH A 132 832 832 HOH HOH . 
M 5 HOH A 133 833 833 HOH HOH . 
M 5 HOH A 134 834 834 HOH HOH . 
M 5 HOH A 135 835 835 HOH HOH . 
M 5 HOH A 136 836 836 HOH HOH . 
M 5 HOH A 137 837 837 HOH HOH . 
M 5 HOH A 138 838 838 HOH HOH . 
M 5 HOH A 139 839 839 HOH HOH . 
M 5 HOH A 140 840 840 HOH HOH . 
M 5 HOH A 141 841 841 HOH HOH . 
M 5 HOH A 142 842 842 HOH HOH . 
M 5 HOH A 143 843 843 HOH HOH . 
M 5 HOH A 144 844 844 HOH HOH . 
M 5 HOH A 145 845 845 HOH HOH . 
M 5 HOH A 146 846 846 HOH HOH . 
M 5 HOH A 147 847 847 HOH HOH . 
M 5 HOH A 148 848 848 HOH HOH . 
M 5 HOH A 149 849 849 HOH HOH . 
M 5 HOH A 150 850 850 HOH HOH . 
M 5 HOH A 151 851 851 HOH HOH . 
M 5 HOH A 152 852 852 HOH HOH . 
M 5 HOH A 153 853 853 HOH HOH . 
M 5 HOH A 154 854 854 HOH HOH . 
N 5 HOH B 1 701 701 HOH HOH . 
N 5 HOH B 2 702 702 HOH HOH . 
N 5 HOH B 3 703 703 HOH HOH . 
N 5 HOH B 4 704 704 HOH HOH . 
N 5 HOH B 5 705 705 HOH HOH . 
N 5 HOH B 6 706 706 HOH HOH . 
N 5 HOH B 7 707 707 HOH HOH . 
N 5 HOH B 8 708 708 HOH HOH . 
N 5 HOH B 9 709 709 HOH HOH . 
N 5 HOH B 10 710 710 HOH HOH . 
N 5 HOH B 11 711 711 HOH HOH . 
N 5 HOH B 12 712 712 HOH HOH . 
N 5 HOH B 13 713 713 HOH HOH . 
N 5 HOH B 14 714 714 HOH HOH . 
N 5 HOH B 15 715 715 HOH HOH . 
N 5 HOH B 16 716 716 HOH HOH . 
N 5 HOH B 17 717 717 HOH HOH . 
N 5 HOH B 18 718 718 HOH HOH . 
N 5 HOH B 19 719 719 HOH HOH . 
N 5 HOH B 20 720 720 HOH HOH . 
N 5 HOH B 21 721 721 HOH HOH . 
N 5 HOH B 22 722 722 HOH HOH . 
N 5 HOH B 23 723 723 HOH HOH . 
N 5 HOH B 24 724 724 HOH HOH . 
N 5 HOH B 25 725 725 HOH HOH . 
N 5 HOH B 26 726 726 HOH HOH . 
N 5 HOH B 27 727 727 HOH HOH . 
N 5 HOH B 28 728 728 HOH HOH . 
N 5 HOH B 29 729 729 HOH HOH . 
N 5 HOH B 30 730 730 HOH HOH . 
N 5 HOH B 31 731 731 HOH HOH . 
N 5 HOH B 32 732 732 HOH HOH . 
N 5 HOH B 33 733 733 HOH HOH . 
N 5 HOH B 34 734 734 HOH HOH . 
N 5 HOH B 35 735 735 HOH HOH . 
N 5 HOH B 36 736 736 HOH HOH . 
N 5 HOH B 37 737 737 HOH HOH . 
N 5 HOH B 38 738 738 HOH HOH . 
N 5 HOH B 39 739 739 HOH HOH . 
N 5 HOH B 40 740 740 HOH HOH . 
N 5 HOH B 41 741 741 HOH HOH . 
N 5 HOH B 42 742 742 HOH HOH . 
N 5 HOH B 43 743 743 HOH HOH . 
N 5 HOH B 44 744 744 HOH HOH . 
N 5 HOH B 45 745 745 HOH HOH . 
N 5 HOH B 46 746 746 HOH HOH . 
N 5 HOH B 47 747 747 HOH HOH . 
N 5 HOH B 48 748 748 HOH HOH . 
N 5 HOH B 49 749 749 HOH HOH . 
N 5 HOH B 50 750 750 HOH HOH . 
N 5 HOH B 51 751 751 HOH HOH . 
N 5 HOH B 52 752 752 HOH HOH . 
N 5 HOH B 53 753 753 HOH HOH . 
N 5 HOH B 54 754 754 HOH HOH . 
N 5 HOH B 55 755 755 HOH HOH . 
N 5 HOH B 56 756 756 HOH HOH . 
N 5 HOH B 57 757 757 HOH HOH . 
N 5 HOH B 58 758 758 HOH HOH . 
N 5 HOH B 59 759 759 HOH HOH . 
N 5 HOH B 60 760 760 HOH HOH . 
N 5 HOH B 61 761 761 HOH HOH . 
N 5 HOH B 62 762 762 HOH HOH . 
N 5 HOH B 63 763 763 HOH HOH . 
N 5 HOH B 64 764 764 HOH HOH . 
N 5 HOH B 65 765 765 HOH HOH . 
N 5 HOH B 66 766 766 HOH HOH . 
N 5 HOH B 67 767 767 HOH HOH . 
N 5 HOH B 68 768 768 HOH HOH . 
N 5 HOH B 69 769 769 HOH HOH . 
N 5 HOH B 70 770 770 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . H 3 -2.612 -57.22 -27.917 1 95.57 ? C1 GOL 606 A 1 
HETATM 2 O O1 GOL . . . H 3 -1.858 -56.71 -29.021 1 87.11 ? O1 GOL 606 A 1 
HETATM 3 C C2 GOL . . . H 3 -2.613 -56.275 -26.721 1 91.53 ? C2 GOL 606 A 1 
HETATM 4 O O2 GOL . . . H 3 -1.478 -56.544 -25.9 1 65.04 ? O2 GOL 606 A 1 
HETATM 5 C C3 GOL . . . H 3 -3.879 -56.343 -25.863 1 99.62 ? C3 GOL 606 A 1 
HETATM 6 O O3 GOL . . . H 3 -4.087 -55.184 -25.034 1 74.65 ? O3 GOL 606 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           288 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#