data_8AEK # _model_server_result.job_id Z8XZo0BRkM-uv5iqnyJwAw _model_server_result.datetime_utc '2024-10-26 02:26:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8aek # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 8AEK # _exptl.entry_id 8AEK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 224.182 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-[5-(trifluoromethyl)-1H-indol-3-yl]ethanenitrile _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.65 _cell.angle_gamma 90 _cell.entry_id 8AEK _cell.length_a 58.46 _cell.length_b 45.858 _cell.length_c 63.117 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8AEK _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C11 H7 F3 N2' _chem_comp.formula_weight 224.182 _chem_comp.id LVL _chem_comp.mon_nstd_flag . _chem_comp.name 2-[5-(trifluoromethyl)-1H-indol-3-yl]ethanenitrile _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C8 LVL trip 249 n n C8 C7 LVL sing 250 n n C7 C6 LVL sing 251 n n C5 C6 LVL doub 252 n y C5 N LVL sing 253 n y C6 C9 LVL sing 254 n y N C4 LVL sing 255 n y C9 C10 LVL sing 256 n y C9 C4 LVL doub 257 n y C10 C1 LVL doub 258 n y C4 C3 LVL sing 259 n y F2 C LVL sing 260 n n C1 C2 LVL sing 261 n y C1 C LVL sing 262 n n C3 C2 LVL doub 263 n y C F1 LVL sing 264 n n C F LVL sing 265 n n C2 H1 LVL sing 266 n n C3 H2 LVL sing 267 n n C5 H3 LVL sing 268 n n C7 H4 LVL sing 269 n n C7 H5 LVL sing 270 n n N H6 LVL sing 271 n n C10 H7 LVL sing 272 n n # _atom_sites.entry_id 8AEK _atom_sites.fract_transf_matrix[1][1] 0.017106 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00679 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021806 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017046 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 LVL A 1 401 1 LVL 108 . C 3 ATP A 1 402 1 ATP ATP . D 4 ACT A 1 403 1 ACT ACT . E 4 ACT A 1 404 2 ACT ACT . F 4 ACT A 1 405 3 ACT ACT . G 5 HOH A 1 501 162 HOH HOH . G 5 HOH A 2 502 265 HOH HOH . G 5 HOH A 3 503 196 HOH HOH . G 5 HOH A 4 504 256 HOH HOH . G 5 HOH A 5 505 251 HOH HOH . G 5 HOH A 6 506 220 HOH HOH . G 5 HOH A 7 507 186 HOH HOH . G 5 HOH A 8 508 214 HOH HOH . G 5 HOH A 9 509 230 HOH HOH . G 5 HOH A 10 510 85 HOH HOH . G 5 HOH A 11 511 127 HOH HOH . G 5 HOH A 12 512 266 HOH HOH . G 5 HOH A 13 513 246 HOH HOH . G 5 HOH A 14 514 60 HOH HOH . G 5 HOH A 15 515 277 HOH HOH . G 5 HOH A 16 516 289 HOH HOH . G 5 HOH A 17 517 182 HOH HOH . G 5 HOH A 18 518 212 HOH HOH . G 5 HOH A 19 519 8 HOH HOH . G 5 HOH A 20 520 202 HOH HOH . G 5 HOH A 21 521 245 HOH HOH . G 5 HOH A 22 522 192 HOH HOH . G 5 HOH A 23 523 205 HOH HOH . G 5 HOH A 24 524 237 HOH HOH . G 5 HOH A 25 525 218 HOH HOH . G 5 HOH A 26 526 139 HOH HOH . G 5 HOH A 27 527 48 HOH HOH . G 5 HOH A 28 528 201 HOH HOH . G 5 HOH A 29 529 234 HOH HOH . G 5 HOH A 30 530 223 HOH HOH . G 5 HOH A 31 531 173 HOH HOH . G 5 HOH A 32 532 177 HOH HOH . G 5 HOH A 33 533 130 HOH HOH . G 5 HOH A 34 534 267 HOH HOH . G 5 HOH A 35 535 188 HOH HOH . G 5 HOH A 36 536 259 HOH HOH . G 5 HOH A 37 537 191 HOH HOH . G 5 HOH A 38 538 233 HOH HOH . G 5 HOH A 39 539 165 HOH HOH . G 5 HOH A 40 540 61 HOH HOH . G 5 HOH A 41 541 276 HOH HOH . G 5 HOH A 42 542 70 HOH HOH . G 5 HOH A 43 543 280 HOH HOH . G 5 HOH A 44 544 208 HOH HOH . G 5 HOH A 45 545 57 HOH HOH . G 5 HOH A 46 546 17 HOH HOH . G 5 HOH A 47 547 23 HOH HOH . G 5 HOH A 48 548 81 HOH HOH . G 5 HOH A 49 549 131 HOH HOH . G 5 HOH A 50 550 68 HOH HOH . G 5 HOH A 51 551 209 HOH HOH . G 5 HOH A 52 552 207 HOH HOH . G 5 HOH A 53 553 4 HOH HOH . G 5 HOH A 54 554 22 HOH HOH . G 5 HOH A 55 555 121 HOH HOH . G 5 HOH A 56 556 229 HOH HOH . G 5 HOH A 57 557 147 HOH HOH . G 5 HOH A 58 558 281 HOH HOH . G 5 HOH A 59 559 114 HOH HOH . G 5 HOH A 60 560 157 HOH HOH . G 5 HOH A 61 561 194 HOH HOH . G 5 HOH A 62 562 272 HOH HOH . G 5 HOH A 63 563 241 HOH HOH . G 5 HOH A 64 564 64 HOH HOH . G 5 HOH A 65 565 278 HOH HOH . G 5 HOH A 66 566 13 HOH HOH . G 5 HOH A 67 567 239 HOH HOH . G 5 HOH A 68 568 118 HOH HOH . G 5 HOH A 69 569 295 HOH HOH . G 5 HOH A 70 570 142 HOH HOH . G 5 HOH A 71 571 170 HOH HOH . G 5 HOH A 72 572 255 HOH HOH . G 5 HOH A 73 573 65 HOH HOH . G 5 HOH A 74 574 274 HOH HOH . G 5 HOH A 75 575 12 HOH HOH . G 5 HOH A 76 576 261 HOH HOH . G 5 HOH A 77 577 56 HOH HOH . G 5 HOH A 78 578 228 HOH HOH . G 5 HOH A 79 579 210 HOH HOH . G 5 HOH A 80 580 94 HOH HOH . G 5 HOH A 81 581 27 HOH HOH . G 5 HOH A 82 582 252 HOH HOH . G 5 HOH A 83 583 14 HOH HOH . G 5 HOH A 84 584 102 HOH HOH . G 5 HOH A 85 585 53 HOH HOH . G 5 HOH A 86 586 37 HOH HOH . G 5 HOH A 87 587 258 HOH HOH . G 5 HOH A 88 588 159 HOH HOH . G 5 HOH A 89 589 101 HOH HOH . G 5 HOH A 90 590 216 HOH HOH . G 5 HOH A 91 591 72 HOH HOH . G 5 HOH A 92 592 293 HOH HOH . G 5 HOH A 93 593 34 HOH HOH . G 5 HOH A 94 594 112 HOH HOH . G 5 HOH A 95 595 103 HOH HOH . G 5 HOH A 96 596 128 HOH HOH . G 5 HOH A 97 597 76 HOH HOH . G 5 HOH A 98 598 151 HOH HOH . G 5 HOH A 99 599 36 HOH HOH . G 5 HOH A 100 600 187 HOH HOH . G 5 HOH A 101 601 243 HOH HOH . G 5 HOH A 102 602 1 HOH HOH . G 5 HOH A 103 603 135 HOH HOH . G 5 HOH A 104 604 198 HOH HOH . G 5 HOH A 105 605 282 HOH HOH . G 5 HOH A 106 606 69 HOH HOH . G 5 HOH A 107 607 199 HOH HOH . G 5 HOH A 108 608 25 HOH HOH . G 5 HOH A 109 609 104 HOH HOH . G 5 HOH A 110 610 44 HOH HOH . G 5 HOH A 111 611 42 HOH HOH . G 5 HOH A 112 612 20 HOH HOH . G 5 HOH A 113 613 119 HOH HOH . G 5 HOH A 114 614 204 HOH HOH . G 5 HOH A 115 615 226 HOH HOH . G 5 HOH A 116 616 225 HOH HOH . G 5 HOH A 117 617 80 HOH HOH . G 5 HOH A 118 618 5 HOH HOH . G 5 HOH A 119 619 126 HOH HOH . G 5 HOH A 120 620 40 HOH HOH . G 5 HOH A 121 621 38 HOH HOH . G 5 HOH A 122 622 184 HOH HOH . G 5 HOH A 123 623 242 HOH HOH . G 5 HOH A 124 624 10 HOH HOH . G 5 HOH A 125 625 117 HOH HOH . G 5 HOH A 126 626 195 HOH HOH . G 5 HOH A 127 627 55 HOH HOH . G 5 HOH A 128 628 63 HOH HOH . G 5 HOH A 129 629 152 HOH HOH . G 5 HOH A 130 630 206 HOH HOH . G 5 HOH A 131 631 51 HOH HOH . G 5 HOH A 132 632 178 HOH HOH . G 5 HOH A 133 633 74 HOH HOH . G 5 HOH A 134 634 59 HOH HOH . G 5 HOH A 135 635 54 HOH HOH . G 5 HOH A 136 636 175 HOH HOH . G 5 HOH A 137 637 71 HOH HOH . G 5 HOH A 138 638 108 HOH HOH . G 5 HOH A 139 639 109 HOH HOH . G 5 HOH A 140 640 98 HOH HOH . G 5 HOH A 141 641 262 HOH HOH . G 5 HOH A 142 642 138 HOH HOH . G 5 HOH A 143 643 180 HOH HOH . G 5 HOH A 144 644 260 HOH HOH . G 5 HOH A 145 645 86 HOH HOH . G 5 HOH A 146 646 3 HOH HOH . G 5 HOH A 147 647 185 HOH HOH . G 5 HOH A 148 648 32 HOH HOH . G 5 HOH A 149 649 97 HOH HOH . G 5 HOH A 150 650 41 HOH HOH . G 5 HOH A 151 651 156 HOH HOH . G 5 HOH A 152 652 6 HOH HOH . G 5 HOH A 153 653 158 HOH HOH . G 5 HOH A 154 654 92 HOH HOH . G 5 HOH A 155 655 2 HOH HOH . G 5 HOH A 156 656 213 HOH HOH . G 5 HOH A 157 657 219 HOH HOH . G 5 HOH A 158 658 88 HOH HOH . G 5 HOH A 159 659 238 HOH HOH . G 5 HOH A 160 660 26 HOH HOH . G 5 HOH A 161 661 95 HOH HOH . G 5 HOH A 162 662 39 HOH HOH . G 5 HOH A 163 663 9 HOH HOH . G 5 HOH A 164 664 215 HOH HOH . G 5 HOH A 165 665 124 HOH HOH . G 5 HOH A 166 666 183 HOH HOH . G 5 HOH A 167 667 200 HOH HOH . G 5 HOH A 168 668 52 HOH HOH . G 5 HOH A 169 669 211 HOH HOH . G 5 HOH A 170 670 217 HOH HOH . G 5 HOH A 171 671 7 HOH HOH . G 5 HOH A 172 672 283 HOH HOH . G 5 HOH A 173 673 244 HOH HOH . G 5 HOH A 174 674 18 HOH HOH . G 5 HOH A 175 675 143 HOH HOH . G 5 HOH A 176 676 107 HOH HOH . G 5 HOH A 177 677 197 HOH HOH . G 5 HOH A 178 678 129 HOH HOH . G 5 HOH A 179 679 222 HOH HOH . G 5 HOH A 180 680 231 HOH HOH . G 5 HOH A 181 681 45 HOH HOH . G 5 HOH A 182 682 50 HOH HOH . G 5 HOH A 183 683 284 HOH HOH . G 5 HOH A 184 684 62 HOH HOH . G 5 HOH A 185 685 11 HOH HOH . G 5 HOH A 186 686 181 HOH HOH . G 5 HOH A 187 687 93 HOH HOH . G 5 HOH A 188 688 82 HOH HOH . G 5 HOH A 189 689 105 HOH HOH . G 5 HOH A 190 690 89 HOH HOH . G 5 HOH A 191 691 33 HOH HOH . G 5 HOH A 192 692 31 HOH HOH . G 5 HOH A 193 693 99 HOH HOH . G 5 HOH A 194 694 254 HOH HOH . G 5 HOH A 195 695 285 HOH HOH . G 5 HOH A 196 696 268 HOH HOH . G 5 HOH A 197 697 169 HOH HOH . G 5 HOH A 198 698 15 HOH HOH . G 5 HOH A 199 699 232 HOH HOH . G 5 HOH A 200 700 257 HOH HOH . G 5 HOH A 201 701 275 HOH HOH . G 5 HOH A 202 702 73 HOH HOH . G 5 HOH A 203 703 140 HOH HOH . G 5 HOH A 204 704 190 HOH HOH . G 5 HOH A 205 705 75 HOH HOH . G 5 HOH A 206 706 149 HOH HOH . G 5 HOH A 207 707 144 HOH HOH . G 5 HOH A 208 708 35 HOH HOH . G 5 HOH A 209 709 240 HOH HOH . G 5 HOH A 210 710 179 HOH HOH . G 5 HOH A 211 711 155 HOH HOH . G 5 HOH A 212 712 290 HOH HOH . G 5 HOH A 213 713 253 HOH HOH . G 5 HOH A 214 714 189 HOH HOH . G 5 HOH A 215 715 221 HOH HOH . G 5 HOH A 216 716 154 HOH HOH . G 5 HOH A 217 717 235 HOH HOH . G 5 HOH A 218 718 263 HOH HOH . G 5 HOH A 219 719 174 HOH HOH . G 5 HOH A 220 720 132 HOH HOH . G 5 HOH A 221 721 136 HOH HOH . G 5 HOH A 222 722 248 HOH HOH . G 5 HOH A 223 723 110 HOH HOH . G 5 HOH A 224 724 224 HOH HOH . G 5 HOH A 225 725 291 HOH HOH . G 5 HOH A 226 726 193 HOH HOH . G 5 HOH A 227 727 249 HOH HOH . G 5 HOH A 228 728 287 HOH HOH . G 5 HOH A 229 729 24 HOH HOH . G 5 HOH A 230 730 146 HOH HOH . G 5 HOH A 231 731 164 HOH HOH . G 5 HOH A 232 732 292 HOH HOH . G 5 HOH A 233 733 163 HOH HOH . G 5 HOH A 234 734 294 HOH HOH . G 5 HOH A 235 735 176 HOH HOH . G 5 HOH A 236 736 49 HOH HOH . G 5 HOH A 237 737 271 HOH HOH . G 5 HOH A 238 738 141 HOH HOH . G 5 HOH A 239 739 79 HOH HOH . G 5 HOH A 240 740 270 HOH HOH . G 5 HOH A 241 741 125 HOH HOH . G 5 HOH A 242 742 236 HOH HOH . G 5 HOH A 243 743 145 HOH HOH . G 5 HOH A 244 744 46 HOH HOH . G 5 HOH A 245 745 250 HOH HOH . G 5 HOH A 246 746 78 HOH HOH . G 5 HOH A 247 747 172 HOH HOH . G 5 HOH A 248 748 168 HOH HOH . G 5 HOH A 249 749 148 HOH HOH . G 5 HOH A 250 750 150 HOH HOH . G 5 HOH A 251 751 123 HOH HOH . G 5 HOH A 252 752 288 HOH HOH . G 5 HOH A 253 753 279 HOH HOH . G 5 HOH A 254 754 134 HOH HOH . G 5 HOH A 255 755 203 HOH HOH . G 5 HOH A 256 756 91 HOH HOH . G 5 HOH A 257 757 167 HOH HOH . G 5 HOH A 258 758 286 HOH HOH . G 5 HOH A 259 759 153 HOH HOH . G 5 HOH A 260 760 247 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 LVL . . . B 2 -106.336 -175.758 312.017 1 20.59 ? C1 LVL 401 A 1 HETATM 2 C C2 LVL . . . B 2 -107.274 -176.64 312.553 1 19.08 ? C2 LVL 401 A 1 HETATM 3 C C3 LVL . . . B 2 -108.567 -176.715 312.05 1 15.69 ? C3 LVL 401 A 1 HETATM 4 C C4 LVL . . . B 2 -108.912 -175.868 310.994 1 16.84 ? C4 LVL 401 A 1 HETATM 5 C C5 LVL . . . B 2 -109.937 -174.751 309.351 1 22.42 ? C5 LVL 401 A 1 HETATM 6 C C6 LVL . . . B 2 -108.669 -174.248 309.394 1 20.67 ? C6 LVL 401 A 1 HETATM 7 C C7 LVL . . . B 2 -108.071 -173.245 308.478 1 20.62 ? C7 LVL 401 A 1 HETATM 8 C C8 LVL . . . B 2 -107.066 -173.89 307.645 1 19.62 ? C8 LVL 401 A 1 HETATM 9 N N1 LVL . . . B 2 -106.253 -174.448 307.072 1 18.55 ? N1 LVL 401 A 1 HETATM 10 N N LVL . . . B 2 -110.089 -175.733 310.299 1 19.75 ? N LVL 401 A 1 HETATM 11 C C LVL . . . B 2 -104.951 -175.682 312.579 1 27.72 ? C LVL 401 A 1 HETATM 12 C C9 LVL . . . B 2 -107.991 -174.953 310.447 1 19.35 ? C9 LVL 401 A 1 HETATM 13 C C10 LVL . . . B 2 -106.698 -174.916 310.965 1 16.54 ? C10 LVL 401 A 1 HETATM 14 F F LVL . . . B 2 -104.754 -176.472 313.624 1 29.31 ? F LVL 401 A 1 HETATM 15 F F1 LVL . . . B 2 -104.655 -174.483 313.008 1 32.5 ? F1 LVL 401 A 1 HETATM 16 F F2 LVL . . . B 2 -104.013 -175.993 311.683 1 31.66 ? F2 LVL 401 A 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 33 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 16 #