data_8AGD # _model_server_result.job_id 6cFaeXNJKhxRN4exsPox4w _model_server_result.datetime_utc '2024-11-15 19:24:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8agd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":1301}' # _entry.id 8AGD # _exptl.entry_id 8AGD _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 967.214 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[(2~{S})-3-[[(2~{S})-3-[(2~{S},3~{S},4~{S},5~{S},6~{S})-6-(hydroxymethyl)-4,5-bis(oxidanyl)-3-(propanoylamino)oxan-2-yl]oxy-1-oxidanylidene-1-(pentadecylamino)propan-2-yl]oxy-oxidanyl-phosphoryl]oxy-2-octanoyloxy-propyl] decanoate' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 I N N ? 5 N N N ? 5 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 N C50 JPX . B JPX 1301 1_555 Q O15 JQ6 . B JQ6 1304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.268 ? metalc ? metalc1 A OD1 ASP 274 A ASP 274 1_555 L CU CU . A CU 1206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? metalc ? metalc2 A OD2 ASP 276 A ASP 276 1_555 L CU CU . A CU 1206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? metalc ? metalc3 A O ARG 305 A ARG 305 1_555 L CU CU . A CU 1206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? metalc ? metalc4 A O PHE 308 A PHE 308 1_555 L CU CU . A CU 1206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.597 ? metalc ? metalc5 A OD1 ASP 310 A ASP 310 1_555 L CU CU . A CU 1206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? metalc ? metalc6 A OE2 GLU 381 A GLU 381 1_555 R CU CU . B CU 1305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.941 ? metalc ? metalc7 A OD1 ASP 438 A ASP 438 1_555 M FE FE . A FE 1207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.528 ? metalc ? metalc8 A OD1 ASN 442 A ASN 442 1_555 M FE FE . A FE 1207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? metalc ? metalc9 A ND2 ASN 442 A ASN 442 1_555 M FE FE . A FE 1207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.551 ? metalc ? metalc10 A O LYS 444 A LYS 444 1_555 M FE FE . A FE 1207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? metalc ? metalc11 A OD2 ASP 446 A ASP 446 1_555 M FE FE . A FE 1207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.794 ? metalc ? metalc12 A OD1 ASP 513 A ASP 513 1_555 K CU CU . A CU 1205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.792 ? metalc ? metalc13 A OD1 ASN 515 A ASN 515 1_555 K CU CU . A CU 1205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.47 ? metalc ? metalc14 A O ARG 549 A ARG 549 1_555 J CU CU . A CU 1204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? metalc ? metalc15 A O GLY 551 A GLY 551 1_555 J CU CU . A CU 1204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc16 A O GLY 559 A GLY 559 1_555 J CU CU . A CU 1204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.78 ? metalc ? metalc17 A O GLY 716 A GLY 716 1_555 K CU CU . A CU 1205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.277 ? metalc ? metalc18 J CU CU . A CU 1204 1_555 C OE2 GLU 381 C GLU 381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.879 ? metalc ? metalc19 B OD1 ASP 274 B ASP 274 1_555 T CU CU . B CU 1307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? metalc ? metalc20 B OD2 ASP 276 B ASP 276 1_555 T CU CU . B CU 1307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? metalc ? metalc21 B O ARG 305 B ARG 305 1_555 T CU CU . B CU 1307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? metalc ? metalc22 B O PHE 308 B PHE 308 1_555 T CU CU . B CU 1307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.616 ? metalc ? metalc23 B OD1 ASP 310 B ASP 310 1_555 T CU CU . B CU 1307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc24 B OE2 GLU 381 B GLU 381 1_555 X CU CU . C CU 1203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.928 ? metalc ? metalc25 B OD1 ASP 438 B ASP 438 1_555 U FE FE . B FE 1308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.582 ? metalc ? metalc26 B OD1 ASN 442 B ASN 442 1_555 U FE FE . B FE 1308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.85 ? metalc ? metalc27 B ND2 ASN 442 B ASN 442 1_555 U FE FE . B FE 1308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? metalc ? metalc28 B O LYS 444 B LYS 444 1_555 U FE FE . B FE 1308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.452 ? metalc ? metalc29 B OD2 ASP 446 B ASP 446 1_555 U FE FE . B FE 1308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.735 ? metalc ? metalc30 B OD1 ASN 515 B ASN 515 1_555 S CU CU . B CU 1306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? metalc ? metalc31 B O ARG 549 B ARG 549 1_555 R CU CU . B CU 1305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? metalc ? metalc32 B O GLY 551 B GLY 551 1_555 R CU CU . B CU 1305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? metalc ? metalc33 B O GLY 559 B GLY 559 1_555 R CU CU . B CU 1305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.891 ? metalc ? metalc34 B O GLY 716 B GLY 716 1_555 S CU CU . B CU 1306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.472 ? metalc ? metalc35 C OD1 ASP 274 C ASP 274 1_555 Z CU CU . C CU 1205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.919 ? metalc ? metalc36 C OD2 ASP 276 C ASP 276 1_555 Z CU CU . C CU 1205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? metalc ? metalc37 C O ARG 305 C ARG 305 1_555 Z CU CU . C CU 1205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? metalc ? metalc38 C O PHE 308 C PHE 308 1_555 Z CU CU . C CU 1205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.426 ? metalc ? metalc39 C OD1 ASP 310 C ASP 310 1_555 Z CU CU . C CU 1205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? metalc ? metalc40 C OD1 ASP 438 C ASP 438 1_555 AA FE FE . C FE 1206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? metalc ? metalc41 C OD1 ASN 442 C ASN 442 1_555 AA FE FE . C FE 1206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.786 ? metalc ? metalc42 C ND2 ASN 442 C ASN 442 1_555 AA FE FE . C FE 1206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc43 C O LYS 444 C LYS 444 1_555 AA FE FE . C FE 1206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? metalc ? metalc44 C OD1 ASN 515 C ASN 515 1_555 Y CU CU . C CU 1204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.517 ? metalc ? metalc45 C O ARG 549 C ARG 549 1_555 X CU CU . C CU 1203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? metalc ? metalc46 C O GLY 551 C GLY 551 1_555 X CU CU . C CU 1203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.486 ? metalc ? metalc47 C OD2 ASP 553 C ASP 553 1_555 X CU CU . C CU 1203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? metalc ? metalc48 C O GLY 559 C GLY 559 1_555 X CU CU . C CU 1203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.862 ? metalc ? metalc49 C O GLY 716 C GLY 716 1_555 Y CU CU . C CU 1204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? metalc ? metalc50 D NE2 HIS 76 H HIS 76 1_555 BA CU CU . H CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.602 ? metalc ? metalc51 E NE2 HIS 74 I HIS 74 1_555 CA CU CU . I CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? metalc ? metalc52 E NE2 HIS 76 I HIS 76 1_555 CA CU CU . I CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc53 F ND1 HIS 74 L HIS 74 1_555 DA CU CU . L CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.645 ? metalc ? metalc54 F NE2 HIS 76 L HIS 76 1_555 DA CU CU . L CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.517 ? # _chem_comp.formula 'C48 H91 N2 O15 P' _chem_comp.formula_weight 967.214 _chem_comp.id JPX _chem_comp.mon_nstd_flag . _chem_comp.name '[(2~{S})-3-[[(2~{S})-3-[(2~{S},3~{S},4~{S},5~{S},6~{S})-6-(hydroxymethyl)-4,5-bis(oxidanyl)-3-(propanoylamino)oxan-2-yl]oxy-1-oxidanylidene-1-(pentadecylamino)propan-2-yl]oxy-oxidanyl-phosphoryl]oxy-2-octanoyloxy-propyl] decanoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O11 C15 JPX doub 294 n n O10 C7 JPX sing 295 n n C7 C6 JPX sing 296 n n C7 C8 JPX sing 297 n n C6 C5 JPX sing 298 n n C6 O9 JPX sing 299 n n C15 N2 JPX sing 300 n n C15 C16 JPX sing 301 n n N2 C8 JPX sing 302 n n C5 C14 JPX sing 303 n n C5 O6 JPX sing 304 n n C8 C4 JPX sing 305 n n C14 O8 JPX sing 306 n n C16 C50 JPX sing 307 n n C4 O6 JPX sing 308 n n C4 O5 JPX sing 309 n n O5 C2 JPX sing 310 n n C2 C1 JPX sing 311 n n O3 P1 JPX doub 312 n n C1 O1 JPX sing 313 n n C1 C3 JPX sing 314 n n O2 P1 JPX sing 315 n n P1 O1 JPX sing 316 n n P1 O4 JPX sing 317 n n N1 C3 JPX sing 318 n n N1 C9 JPX sing 319 n n C3 O7 JPX doub 320 n n C9 C10 JPX sing 321 n n O4 C17 JPX sing 322 n n C10 C11 JPX sing 323 n n C17 C18 JPX sing 324 n n C11 C12 JPX sing 325 n n C18 C19 JPX sing 326 n n C18 O12 JPX sing 327 n n O14 C25 JPX doub 328 n n C12 C13 JPX sing 329 n n C19 O13 JPX sing 330 n n C27 C43 JPX sing 331 n n C27 C26 JPX sing 332 n n O12 C25 JPX sing 333 n n C25 C26 JPX sing 334 n n C13 C28 JPX sing 335 n n C43 C44 JPX sing 336 n n O13 C20 JPX sing 337 n n C28 C29 JPX sing 338 n n C44 C48 JPX sing 339 n n C20 O15 JPX doub 340 n n C20 C21 JPX sing 341 n n C29 C30 JPX sing 342 n n C48 C49 JPX sing 343 n n C21 C22 JPX sing 344 n n C30 C31 JPX sing 345 n n C31 C32 JPX sing 346 n n C49 C51 JPX sing 347 n n C22 C23 JPX sing 348 n n C32 C33 JPX sing 349 n n C23 C24 JPX sing 350 n n C33 C34 JPX sing 351 n n C24 C38 JPX sing 352 n n C34 C35 JPX sing 353 n n C38 C39 JPX sing 354 n n C35 C36 JPX sing 355 n n C36 C37 JPX sing 356 n n C39 C40 JPX sing 357 n n C40 C41 JPX sing 358 n n C41 C42 JPX sing 359 n n C1 H1 JPX sing 360 n n C2 H2 JPX sing 361 n n C2 H3 JPX sing 362 n n N1 H4 JPX sing 363 n n C4 H5 JPX sing 364 n n C5 H6 JPX sing 365 n n C6 H7 JPX sing 366 n n C7 H8 JPX sing 367 n n N2 H25 JPX sing 368 n n C8 H9 JPX sing 369 n n C10 H12 JPX sing 370 n n C10 H13 JPX sing 371 n n C11 H14 JPX sing 372 n n C11 H15 JPX sing 373 n n C12 H16 JPX sing 374 n n C12 H17 JPX sing 375 n n C13 H18 JPX sing 376 n n C13 H19 JPX sing 377 n n C14 H20 JPX sing 378 n n C14 H21 JPX sing 379 n n C16 H26 JPX sing 380 n n C16 H28 JPX sing 381 n n C17 H29 JPX sing 382 n n C17 H30 JPX sing 383 n n C18 H31 JPX sing 384 n n C19 H32 JPX sing 385 n n C19 H33 JPX sing 386 n n C21 H34 JPX sing 387 n n C21 H35 JPX sing 388 n n C22 H36 JPX sing 389 n n C22 H37 JPX sing 390 n n C23 H38 JPX sing 391 n n C23 H39 JPX sing 392 n n C24 H40 JPX sing 393 n n C24 H41 JPX sing 394 n n C26 H43 JPX sing 395 n n C26 H42 JPX sing 396 n n C27 H45 JPX sing 397 n n C27 H44 JPX sing 398 n n C28 H46 JPX sing 399 n n C28 H47 JPX sing 400 n n C29 H48 JPX sing 401 n n C29 H49 JPX sing 402 n n C30 H50 JPX sing 403 n n C30 H51 JPX sing 404 n n C31 H52 JPX sing 405 n n C31 H53 JPX sing 406 n n C32 H54 JPX sing 407 n n C32 H55 JPX sing 408 n n C33 H56 JPX sing 409 n n C33 H57 JPX sing 410 n n C34 H58 JPX sing 411 n n C34 H59 JPX sing 412 n n C35 H60 JPX sing 413 n n C35 H61 JPX sing 414 n n C36 H62 JPX sing 415 n n C36 H63 JPX sing 416 n n C37 H64 JPX sing 417 n n C37 H65 JPX sing 418 n n C37 H66 JPX sing 419 n n C38 H67 JPX sing 420 n n C38 H68 JPX sing 421 n n C39 H69 JPX sing 422 n n C39 H70 JPX sing 423 n n C40 H71 JPX sing 424 n n C40 H72 JPX sing 425 n n C41 H73 JPX sing 426 n n C41 H74 JPX sing 427 n n C42 H75 JPX sing 428 n n C42 H76 JPX sing 429 n n C42 H27 JPX sing 430 n n C43 H77 JPX sing 431 n n C43 H78 JPX sing 432 n n C44 H79 JPX sing 433 n n C44 H80 JPX sing 434 n n C48 H88 JPX sing 435 n n C48 H89 JPX sing 436 n n C49 H90 JPX sing 437 n n C49 H91 JPX sing 438 n n C9 H10 JPX sing 439 n n C9 H11 JPX sing 440 n n O10 H24 JPX sing 441 n n O2 H87 JPX sing 442 n n O8 H22 JPX sing 443 n n O9 H23 JPX sing 444 n n C50 H83 JPX sing 445 n n C50 H81 JPX sing 446 n n C50 H82 JPX sing 447 n n C51 H84 JPX sing 448 n n C51 H85 JPX sing 449 n n C51 H86 JPX sing 450 n n # _atom_sites.entry_id 8AGD _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 JPI A 1 1201 1201 JPI DEI . H 4 JQ6 A 1 1202 1401 JQ6 GKO . I 5 JPX A 1 1203 1301 JPX GKL . J 6 CU A 1 1204 10 CU CU . K 6 CU A 1 1205 11 CU CU . L 6 CU A 1 1206 14 CU CU . M 7 FE A 1 1207 1 FE FE . N 5 JPX B 1 1301 1301 JPX GKL . O 3 JPI B 1 1302 1201 JPI DEI . P 5 JPX B 1 1303 1301 JPX GKL . Q 4 JQ6 B 1 1304 1401 JQ6 GKO . R 6 CU B 1 1305 7 CU CU . S 6 CU B 1 1306 12 CU CU . T 6 CU B 1 1307 15 CU CU . U 7 FE B 1 1308 2 FE FE . V 3 JPI C 1 1201 1201 JPI DEI . W 4 JQ6 C 1 1202 1401 JQ6 GKO . X 6 CU C 1 1203 9 CU CU . Y 6 CU C 1 1204 13 CU CU . Z 6 CU C 1 1205 16 CU CU . AA 7 FE C 1 1206 3 FE FE . BA 6 CU H 1 301 4 CU CU . CA 6 CU I 1 301 5 CU CU . DA 6 CU L 1 301 6 CU CU . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 JPX . . . N 5 219.017 261.554 273.522 1 0.5 0 O1 JPX 1301 B 1 HETATM 2 C C1 JPX . . . N 5 217.811 261.79 274.205 1 0.5 0 C1 JPX 1301 B 1 HETATM 3 C C2 JPX . . . N 5 217.922 263.144 274.798 1 0.5 0 C2 JPX 1301 B 1 HETATM 4 C C3 JPX . . . N 5 216.608 261.803 273.314 1 0.5 0 C3 JPX 1301 B 1 HETATM 5 N N1 JPX . . . N 5 215.641 260.95 273.601 1 0.5 0 N1 JPX 1301 B 1 HETATM 6 C C4 JPX . . . N 5 218.198 263.518 277.157 1 0.5 0 C4 JPX 1301 B 1 HETATM 7 C C5 JPX . . . N 5 216.81 265.248 278.048 1 0.5 0 C5 JPX 1301 B 1 HETATM 8 C C6 JPX . . . N 5 215.79 264.24 278.564 1 0.5 0 C6 JPX 1301 B 1 HETATM 9 C C7 JPX . . . N 5 216.491 262.933 278.91 1 0.5 0 C7 JPX 1301 B 1 HETATM 10 N N2 JPX . . . N 5 218.23 261.328 278.091 1 0.5 0 N2 JPX 1301 B 1 HETATM 11 C C8 JPX . . . N 5 217.325 262.408 277.747 1 0.5 0 C8 JPX 1301 B 1 HETATM 12 C C10 JPX . . . N 5 214.343 259.449 272.14 1 0.5 0 C10 JPX 1301 B 1 HETATM 13 C C11 JPX . . . N 5 214.64 259.147 270.696 1 0.5 0 C11 JPX 1301 B 1 HETATM 14 C C12 JPX . . . N 5 215.157 257.754 270.441 1 0.5 0 C12 JPX 1301 B 1 HETATM 15 C C13 JPX . . . N 5 215.563 257.495 269.013 1 0.5 0 C13 JPX 1301 B 1 HETATM 16 C C14 JPX . . . N 5 216.234 266.552 277.562 1 0.5 0 C14 JPX 1301 B 1 HETATM 17 C C15 JPX . . . N 5 217.866 260.086 278.412 1 0.5 0 C15 JPX 1301 B 1 HETATM 18 C C16 JPX . . . N 5 217.767 259.12 277.27 1 0.5 0 C16 JPX 1301 B 1 HETATM 19 C C17 JPX . . . N 5 220.207 259.633 271.039 1 0.5 0 C17 JPX 1301 B 1 HETATM 20 C C18 JPX . . . N 5 218.901 260.077 270.42 1 0.5 0 C18 JPX 1301 B 1 HETATM 21 C C19 JPX . . . N 5 218.185 258.938 269.739 1 0.5 0 C19 JPX 1301 B 1 HETATM 22 C C20 JPX . . . N 5 217.681 258.673 267.455 1 0.5 0 C20 JPX 1301 B 1 HETATM 23 C C21 JPX . . . N 5 218.798 259.101 266.546 1 0.5 0 C21 JPX 1301 B 1 HETATM 24 C C22 JPX . . . N 5 218.629 260.466 265.951 1 0.5 0 C22 JPX 1301 B 1 HETATM 25 C C23 JPX . . . N 5 217.792 260.475 264.689 1 0.5 0 C23 JPX 1301 B 1 HETATM 26 C C24 JPX . . . N 5 218.558 260.187 263.423 1 0.5 0 C24 JPX 1301 B 1 HETATM 27 C C25 JPX . . . N 5 218.634 262.31 269.524 1 0.5 0 C25 JPX 1301 B 1 HETATM 28 C C26 JPX . . . N 5 217.313 262.619 268.904 1 0.5 0 C26 JPX 1301 B 1 HETATM 29 C C27 JPX . . . N 5 216.16 262.307 269.791 1 0.5 0 C27 JPX 1301 B 1 HETATM 30 C C28 JPX . . . N 5 215.126 256.157 268.454 1 0.5 0 C28 JPX 1301 B 1 HETATM 31 C C29 JPX . . . N 5 215.213 256.044 266.953 1 0.5 0 C29 JPX 1301 B 1 HETATM 32 C C30 JPX . . . N 5 216.598 256.191 266.382 1 0.5 0 C30 JPX 1301 B 1 HETATM 33 C C31 JPX . . . N 5 216.702 255.856 264.918 1 0.5 0 C31 JPX 1301 B 1 HETATM 34 C C32 JPX . . . N 5 218.09 255.995 264.352 1 0.5 0 C32 JPX 1301 B 1 HETATM 35 C C33 JPX . . . N 5 218.161 255.854 262.859 1 0.5 0 C33 JPX 1301 B 1 HETATM 36 C C34 JPX . . . N 5 218.209 257.154 262.106 1 0.5 0 C34 JPX 1301 B 1 HETATM 37 C C35 JPX . . . N 5 218.038 257.002 260.617 1 0.5 0 C35 JPX 1301 B 1 HETATM 38 C C36 JPX . . . N 5 218.93 257.86 259.769 1 0.5 0 C36 JPX 1301 B 1 HETATM 39 C C37 JPX . . . N 5 218.633 257.736 258.298 1 0.5 0 C37 JPX 1301 B 1 HETATM 40 C C38 JPX . . . N 5 219.129 261.4 262.733 1 0.5 0 C38 JPX 1301 B 1 HETATM 41 C C39 JPX . . . N 5 218.212 262.047 261.731 1 0.5 0 C39 JPX 1301 B 1 HETATM 42 C C40 JPX . . . N 5 218.208 261.404 260.364 1 0.5 0 C40 JPX 1301 B 1 HETATM 43 C C41 JPX . . . N 5 219.194 261.954 259.37 1 0.5 0 C41 JPX 1301 B 1 HETATM 44 C C42 JPX . . . N 5 219.029 261.395 257.979 1 0.5 0 C42 JPX 1301 B 1 HETATM 45 C C43 JPX . . . N 5 214.822 262.727 269.205 1 0.5 0 C43 JPX 1301 B 1 HETATM 46 C C44 JPX . . . N 5 213.915 261.596 268.771 1 0.5 0 C44 JPX 1301 B 1 HETATM 47 C C48 JPX . . . N 5 214.331 260.877 267.51 1 0.5 0 C48 JPX 1301 B 1 HETATM 48 C C49 JPX . . . N 5 214.308 261.692 266.248 1 0.5 0 C49 JPX 1301 B 1 HETATM 49 C C9 JPX . . . N 5 215.571 259.629 273.006 1 0.5 0 C9 JPX 1301 B 1 HETATM 50 O O10 JPX . . . N 5 215.528 261.959 279.281 1 0.5 0 O10 JPX 1301 B 1 HETATM 51 O O11 JPX . . . N 5 217.696 259.737 279.573 1 0.5 0 O11 JPX 1301 B 1 HETATM 52 O O12 JPX . . . N 5 219.099 261.06 269.372 1 0.5 0 O12 JPX 1301 B 1 HETATM 53 O O13 JPX . . . N 5 217.597 259.445 268.527 1 0.5 0 O13 JPX 1301 B 1 HETATM 54 O O14 JPX . . . N 5 219.272 263.165 270.065 1 0.5 0 O14 JPX 1301 B 1 HETATM 55 O O15 JPX . . . N 5 216.945 257.743 267.264 1 0.5 0 O15 JPX 1301 B 1 HETATM 56 O O2 JPX . . . N 5 219.025 259.042 273.656 1 0.5 -1 O2 JPX 1301 B 1 HETATM 57 O O3 JPX . . . N 5 220.941 260.451 274.683 1 0.5 0 O3 JPX 1301 B 1 HETATM 58 O O4 JPX . . . N 5 220.636 260.4 272.192 1 0.5 0 O4 JPX 1301 B 1 HETATM 59 O O5 JPX . . . N 5 218.743 263.038 275.967 1 0.5 0 O5 JPX 1301 B 1 HETATM 60 O O6 JPX . . . N 5 217.47 264.707 276.898 1 0.5 0 O6 JPX 1301 B 1 HETATM 61 O O7 JPX . . . N 5 216.541 262.601 272.39 1 0.5 0 O7 JPX 1301 B 1 HETATM 62 O O8 JPX . . . N 5 216.697 266.8 276.238 1 0.5 0 O8 JPX 1301 B 1 HETATM 63 O O9 JPX . . . N 5 214.794 263.974 277.583 1 0.5 0 O9 JPX 1301 B 1 HETATM 64 P P1 JPX . . . N 5 219.92 260.238 273.612 1 0.5 0 P1 JPX 1301 B 1 HETATM 65 C C50 JPX . . . N 5 216.381 258.968 276.737 1 0.5 0 C50 JPX 1301 B 1 HETATM 66 C C51 JPX . . . N 5 213.796 260.944 265.05 1 0.5 0 C51 JPX 1301 B 1 HETATM 67 H H1 JPX . . . N 5 217.692 261.119 274.918 1 0.5 0 H1 JPX 1301 B 1 HETATM 68 H H2 JPX . . . N 5 218.334 263.755 274.154 1 0.5 0 H2 JPX 1301 B 1 HETATM 69 H H3 JPX . . . N 5 217.016 263.453 274.998 1 0.5 0 H3 JPX 1301 B 1 HETATM 70 H H4 JPX . . . N 5 215.034 261.181 274.181 1 0.5 0 H4 JPX 1301 B 1 HETATM 71 H H5 JPX . . . N 5 218.933 263.727 277.783 1 0.5 0 H5 JPX 1301 B 1 HETATM 72 H H6 JPX . . . N 5 217.475 265.429 278.755 1 0.5 0 H6 JPX 1301 B 1 HETATM 73 H H7 JPX . . . N 5 215.357 264.605 279.376 1 0.5 0 H7 JPX 1301 B 1 HETATM 74 H H8 JPX . . . N 5 217.099 263.091 279.677 1 0.5 0 H8 JPX 1301 B 1 HETATM 75 H H25 JPX . . . N 5 219.09 261.483 278.076 1 0.5 0 H25 JPX 1301 B 1 HETATM 76 H H9 JPX . . . N 5 216.709 262.074 277.056 1 0.5 0 H9 JPX 1301 B 1 HETATM 77 H H12 JPX . . . N 5 213.807 260.267 272.185 1 0.5 0 H12 JPX 1301 B 1 HETATM 78 H H13 JPX . . . N 5 213.804 258.719 272.511 1 0.5 0 H13 JPX 1301 B 1 HETATM 79 H H14 JPX . . . N 5 215.297 259.796 270.364 1 0.5 0 H14 JPX 1301 B 1 HETATM 80 H H15 JPX . . . N 5 213.816 259.272 270.178 1 0.5 0 H15 JPX 1301 B 1 HETATM 81 H H16 JPX . . . N 5 214.463 257.112 270.7 1 0.5 0 H16 JPX 1301 B 1 HETATM 82 H H17 JPX . . . N 5 215.933 257.593 271.016 1 0.5 0 H17 JPX 1301 B 1 HETATM 83 H H18 JPX . . . N 5 216.54 257.552 268.959 1 0.5 0 H18 JPX 1301 B 1 HETATM 84 H H19 JPX . . . N 5 215.195 258.205 268.446 1 0.5 0 H19 JPX 1301 B 1 HETATM 85 H H20 JPX . . . N 5 216.524 267.278 278.151 1 0.5 0 H20 JPX 1301 B 1 HETATM 86 H H21 JPX . . . N 5 215.257 266.519 277.571 1 0.5 0 H21 JPX 1301 B 1 HETATM 87 H H26 JPX . . . N 5 218.091 258.244 277.569 1 0.5 0 H26 JPX 1301 B 1 HETATM 88 H H28 JPX . . . N 5 218.356 259.425 276.547 1 0.5 0 H28 JPX 1301 B 1 HETATM 89 H H29 JPX . . . N 5 220.137 258.695 271.309 1 0.5 0 H29 JPX 1301 B 1 HETATM 90 H H30 JPX . . . N 5 220.91 259.692 270.359 1 0.5 0 H30 JPX 1301 B 1 HETATM 91 H H31 JPX . . . N 5 218.313 260.453 271.12 1 0.5 0 H31 JPX 1301 B 1 HETATM 92 H H32 JPX . . . N 5 217.483 258.576 270.323 1 0.5 0 H32 JPX 1301 B 1 HETATM 93 H H33 JPX . . . N 5 218.812 258.213 269.514 1 0.5 0 H33 JPX 1301 B 1 HETATM 94 H H34 JPX . . . N 5 218.882 258.445 265.822 1 0.5 0 H34 JPX 1301 B 1 HETATM 95 H H35 JPX . . . N 5 219.637 259.084 267.052 1 0.5 0 H35 JPX 1301 B 1 HETATM 96 H H36 JPX . . . N 5 219.512 260.836 265.746 1 0.5 0 H36 JPX 1301 B 1 HETATM 97 H H37 JPX . . . N 5 218.209 261.061 266.605 1 0.5 0 H37 JPX 1301 B 1 HETATM 98 H H38 JPX . . . N 5 217.363 261.352 264.606 1 0.5 0 H38 JPX 1301 B 1 HETATM 99 H H39 JPX . . . N 5 217.08 259.808 264.779 1 0.5 0 H39 JPX 1301 B 1 HETATM 100 H H40 JPX . . . N 5 217.961 259.723 262.801 1 0.5 0 H40 JPX 1301 B 1 HETATM 101 H H41 JPX . . . N 5 219.294 259.576 263.631 1 0.5 0 H41 JPX 1301 B 1 HETATM 102 H H43 JPX . . . N 5 217.291 263.572 268.674 1 0.5 0 H43 JPX 1301 B 1 HETATM 103 H H42 JPX . . . N 5 217.222 262.112 268.07 1 0.5 0 H42 JPX 1301 B 1 HETATM 104 H H45 JPX . . . N 5 216.142 261.345 269.967 1 0.5 0 H45 JPX 1301 B 1 HETATM 105 H H44 JPX . . . N 5 216.283 262.762 270.649 1 0.5 0 H44 JPX 1301 B 1 HETATM 106 H H46 JPX . . . N 5 214.198 255.99 268.718 1 0.5 0 H46 JPX 1301 B 1 HETATM 107 H H47 JPX . . . N 5 215.68 255.455 268.855 1 0.5 0 H47 JPX 1301 B 1 HETATM 108 H H48 JPX . . . N 5 214.637 256.73 266.554 1 0.5 0 H48 JPX 1301 B 1 HETATM 109 H H49 JPX . . . N 5 214.856 255.171 266.688 1 0.5 0 H49 JPX 1301 B 1 HETATM 110 H H50 JPX . . . N 5 217.209 255.608 266.882 1 0.5 0 H50 JPX 1301 B 1 HETATM 111 H H51 JPX . . . N 5 216.897 257.115 266.511 1 0.5 0 H51 JPX 1301 B 1 HETATM 112 H H52 JPX . . . N 5 216.098 256.446 264.418 1 0.5 0 H52 JPX 1301 B 1 HETATM 113 H H53 JPX . . . N 5 216.398 254.934 264.783 1 0.5 0 H53 JPX 1301 B 1 HETATM 114 H H54 JPX . . . N 5 218.665 255.312 264.758 1 0.5 0 H54 JPX 1301 B 1 HETATM 115 H H55 JPX . . . N 5 218.449 256.872 264.605 1 0.5 0 H55 JPX 1301 B 1 HETATM 116 H H56 JPX . . . N 5 217.382 255.343 262.554 1 0.5 0 H56 JPX 1301 B 1 HETATM 117 H H57 JPX . . . N 5 218.962 255.334 262.634 1 0.5 0 H57 JPX 1301 B 1 HETATM 118 H H58 JPX . . . N 5 219.069 257.591 262.284 1 0.5 0 H58 JPX 1301 B 1 HETATM 119 H H59 JPX . . . N 5 217.5 257.741 262.444 1 0.5 0 H59 JPX 1301 B 1 HETATM 120 H H60 JPX . . . N 5 217.106 257.207 260.392 1 0.5 0 H60 JPX 1301 B 1 HETATM 121 H H61 JPX . . . N 5 218.197 256.065 260.379 1 0.5 0 H61 JPX 1301 B 1 HETATM 122 H H62 JPX . . . N 5 219.864 257.603 259.929 1 0.5 0 H62 JPX 1301 B 1 HETATM 123 H H63 JPX . . . N 5 218.821 258.797 260.04 1 0.5 0 H63 JPX 1301 B 1 HETATM 124 H H64 JPX . . . N 5 219.306 258.221 257.789 1 0.5 0 H64 JPX 1301 B 1 HETATM 125 H H65 JPX . . . N 5 217.755 258.109 258.11 1 0.5 0 H65 JPX 1301 B 1 HETATM 126 H H66 JPX . . . N 5 218.647 256.798 258.039 1 0.5 0 H66 JPX 1301 B 1 HETATM 127 H H67 JPX . . . N 5 219.957 261.136 262.276 1 0.5 0 H67 JPX 1301 B 1 HETATM 128 H H68 JPX . . . N 5 219.369 262.065 263.412 1 0.5 0 H68 JPX 1301 B 1 HETATM 129 H H69 JPX . . . N 5 218.471 262.988 261.637 1 0.5 0 H69 JPX 1301 B 1 HETATM 130 H H70 JPX . . . N 5 217.298 262.031 262.086 1 0.5 0 H70 JPX 1301 B 1 HETATM 131 H H71 JPX . . . N 5 217.307 261.495 259.986 1 0.5 0 H71 JPX 1301 B 1 HETATM 132 H H72 JPX . . . N 5 218.381 260.444 260.469 1 0.5 0 H72 JPX 1301 B 1 HETATM 133 H H73 JPX . . . N 5 220.103 261.758 259.686 1 0.5 0 H73 JPX 1301 B 1 HETATM 134 H H74 JPX . . . N 5 219.095 262.931 259.33 1 0.5 0 H74 JPX 1301 B 1 HETATM 135 H H75 JPX . . . N 5 219.785 261.663 257.429 1 0.5 0 H75 JPX 1301 B 1 HETATM 136 H H76 JPX . . . N 5 218.206 261.736 257.587 1 0.5 0 H76 JPX 1301 B 1 HETATM 137 H H27 JPX . . . N 5 218.987 260.424 258.021 1 0.5 0 H27 JPX 1301 B 1 HETATM 138 H H77 JPX . . . N 5 214.982 263.313 268.437 1 0.5 0 H77 JPX 1301 B 1 HETATM 139 H H78 JPX . . . N 5 214.347 263.258 269.878 1 0.5 0 H78 JPX 1301 B 1 HETATM 140 H H79 JPX . . . N 5 213.013 261.958 268.639 1 0.5 0 H79 JPX 1301 B 1 HETATM 141 H H80 JPX . . . N 5 213.861 260.941 269.498 1 0.5 0 H80 JPX 1301 B 1 HETATM 142 H H88 JPX . . . N 5 213.738 260.106 267.391 1 0.5 0 H88 JPX 1301 B 1 HETATM 143 H H89 JPX . . . N 5 215.238 260.531 267.635 1 0.5 0 H89 JPX 1301 B 1 HETATM 144 H H90 JPX . . . N 5 215.219 262.004 266.061 1 0.5 0 H90 JPX 1301 B 1 HETATM 145 H H91 JPX . . . N 5 213.745 262.483 266.388 1 0.5 0 H91 JPX 1301 B 1 HETATM 146 H H10 JPX . . . N 5 215.563 258.958 273.719 1 0.5 0 H10 JPX 1301 B 1 HETATM 147 H H11 JPX . . . N 5 216.378 259.484 272.47 1 0.5 0 H11 JPX 1301 B 1 HETATM 148 H H24 JPX . . . N 5 215.764 261.632 280.017 1 0.5 0 H24 JPX 1301 B 1 HETATM 149 H H22 JPX . . . N 5 217.536 266.688 276.206 1 0.5 0 H22 JPX 1301 B 1 HETATM 150 H H23 JPX . . . N 5 215.115 264.021 276.806 1 0.5 0 H23 JPX 1301 B 1 HETATM 151 H H83 JPX . . . N 5 216.107 259.794 276.303 1 0.5 0 H83 JPX 1301 B 1 HETATM 152 H H81 JPX . . . N 5 215.771 258.772 277.469 1 0.5 0 H81 JPX 1301 B 1 HETATM 153 H H82 JPX . . . N 5 216.359 258.242 276.092 1 0.5 0 H82 JPX 1301 B 1 HETATM 154 H H84 JPX . . . N 5 212.84 260.788 265.146 1 0.5 0 H84 JPX 1301 B 1 HETATM 155 H H85 JPX . . . N 5 214.257 260.09 264.976 1 0.5 0 H85 JPX 1301 B 1 HETATM 156 H H86 JPX . . . N 5 213.958 261.468 264.247 1 0.5 0 H86 JPX 1301 B 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 103 _model_server_stats.query_time_ms 511 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 156 #