data_8AJ5
#
_model_server_result.job_id            jjYCs-w7AyQsMUW4TjPM_g 
_model_server_result.datetime_utc      '2024-12-15 13:45:16' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8aj5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":201}' 
#
_entry.id    8AJ5 
#
_exptl.entry_id    8AJ5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8AJ5 
_cell.length_a            78.23 
_cell.length_b            78.23 
_cell.length_c            37.28 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8AJ5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 6 AAA CYS 6 1_555 A SG CYS 127 AAA CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? 
disulf ? disulf2 A SG CYS 30 AAA CYS 30 1_555 A SG CYS 115 AAA CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? 
disulf ? disulf3 A SG CYS 64 AAA CYS 64 1_555 A SG CYS 80 AAA CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf4 A SG CYS 76 AAA CYS 76 1_555 A SG CYS 94 AAA CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? 
metalc ? metalc1 A OE1 GLU 35 AAA GLU 35 1_555 C V VO4 . AAA VO4 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.531 ? 
metalc ? metalc2 A OE2 GLU 35 AAA GLU 35 1_555 C V VO4 . AAA VO4 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? 
metalc ? metalc3 A OD2 ASP 48 AAA ASP 48 1_555 E V VO4 . AAA VO4 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.808 ? 
metalc ? metalc4 A O SER 60 AAA SER 60 1_555 B NA NA . AAA NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.277 ? 
metalc ? metalc5 A O CYS 64 AAA CYS 64 1_555 B NA NA . AAA NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? 
metalc ? metalc6 A OG SER 72 AAA SER 72 1_555 B NA NA . AAA NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? 
metalc ? metalc7 A O ARG 73 AAA ARG 73 1_555 B NA NA . AAA NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.401 ? 
metalc ? metalc8 A OD2 ASP 87 AAA ASP 87 1_555 F V VO4 . AAA VO4 205 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.319 ? 
metalc ? metalc9 A OD2 ASP 87 AAA ASP 87 1_555 F V VO4 . AAA VO4 205 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.075 ? 
metalc ? metalc10 A OD2 ASP 119 AAA ASP 119 1_555 D V1 VVO . AAA VVO 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? 
metalc ? metalc11 A OXT LEU 129 AAA LEU 129 1_555 G V5 VVB . AAA VVB 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.84 ? 
metalc ? metalc12 A OXT LEU 129 AAA LEU 129 1_555 G V5 VVB . AAA VVB 206 8_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.84 ? 
metalc ? metalc13 B NA NA . AAA NA 201 1_555 J O2 NO3 . AAA NO3 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.705 ? 
metalc ? metalc14 B NA NA . AAA NA 201 1_555 R O HOH . AAA HOH 317 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? 
metalc ? metalc15 D V1 VVO . AAA VVO 203 1_555 Q O2 NO3 . AAA NO3 216 4_454 ? ? ? ? ? ? ? ? ? ? ? ? 2.775 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     8AJ5 
_atom_sites.fract_transf_matrix[1][1]    0.012783 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012783 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.026824 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NA AAA 1 201 131 NA NA . 
C 3 VO4 AAA 1 202 1 VO4 VW2 . 
D 4 VVO AAA 1 203 2 VVO VOQ . 
E 3 VO4 AAA 1 204 3 VO4 VO5 . 
F 3 VO4 AAA 1 205 4 VO4 VO5 . 
G 5 VVB AAA 1 206 5 VVB V5O . 
H 6 ACT AAA 1 207 1 ACT ACT . 
I 6 ACT AAA 1 208 2 ACT ACT . 
J 7 NO3 AAA 1 209 1 NO3 NO3 . 
K 7 NO3 AAA 1 210 2 NO3 NO3 . 
L 7 NO3 AAA 1 211 3 NO3 NO3 . 
M 7 NO3 AAA 1 212 4 NO3 NO3 . 
N 7 NO3 AAA 1 213 5 NO3 NO3 . 
O 7 NO3 AAA 1 214 6 NO3 NO3 . 
P 7 NO3 AAA 1 215 7 NO3 NO3 . 
Q 7 NO3 AAA 1 216 8 NO3 NO3 . 
R 8 HOH AAA 1 301 133 HOH HOH . 
R 8 HOH AAA 2 302 60 HOH HOH . 
R 8 HOH AAA 3 303 38 HOH HOH . 
R 8 HOH AAA 4 304 37 HOH HOH . 
R 8 HOH AAA 5 305 155 HOH HOH . 
R 8 HOH AAA 6 306 136 HOH HOH . 
R 8 HOH AAA 7 307 109 HOH HOH . 
R 8 HOH AAA 8 308 87 HOH HOH . 
R 8 HOH AAA 9 309 62 HOH HOH . 
R 8 HOH AAA 10 310 89 HOH HOH . 
R 8 HOH AAA 11 311 32 HOH HOH . 
R 8 HOH AAA 12 312 64 HOH HOH . 
R 8 HOH AAA 13 313 33 HOH HOH . 
R 8 HOH AAA 14 314 79 HOH HOH . 
R 8 HOH AAA 15 315 137 HOH HOH . 
R 8 HOH AAA 16 316 118 HOH HOH . 
R 8 HOH AAA 17 317 14 HOH HOH . 
R 8 HOH AAA 18 318 110 HOH HOH . 
R 8 HOH AAA 19 319 125 HOH HOH . 
R 8 HOH AAA 20 320 70 HOH HOH . 
R 8 HOH AAA 21 321 113 HOH HOH . 
R 8 HOH AAA 22 322 34 HOH HOH . 
R 8 HOH AAA 23 323 117 HOH HOH . 
R 8 HOH AAA 24 324 13 HOH HOH . 
R 8 HOH AAA 25 325 103 HOH HOH . 
R 8 HOH AAA 26 326 126 HOH HOH . 
R 8 HOH AAA 27 327 16 HOH HOH . 
R 8 HOH AAA 28 328 123 HOH HOH . 
R 8 HOH AAA 29 329 3 HOH HOH . 
R 8 HOH AAA 30 330 21 HOH HOH . 
R 8 HOH AAA 31 331 108 HOH HOH . 
R 8 HOH AAA 32 332 93 HOH HOH . 
R 8 HOH AAA 33 333 156 HOH HOH . 
R 8 HOH AAA 34 334 73 HOH HOH . 
R 8 HOH AAA 35 335 115 HOH HOH . 
R 8 HOH AAA 36 336 12 HOH HOH . 
R 8 HOH AAA 37 337 20 HOH HOH . 
R 8 HOH AAA 38 338 130 HOH HOH . 
R 8 HOH AAA 39 339 88 HOH HOH . 
R 8 HOH AAA 40 340 106 HOH HOH . 
R 8 HOH AAA 41 341 148 HOH HOH . 
R 8 HOH AAA 42 342 7 HOH HOH . 
R 8 HOH AAA 43 343 127 HOH HOH . 
R 8 HOH AAA 44 344 25 HOH HOH . 
R 8 HOH AAA 45 345 35 HOH HOH . 
R 8 HOH AAA 46 346 1 HOH HOH . 
R 8 HOH AAA 47 347 42 HOH HOH . 
R 8 HOH AAA 48 348 18 HOH HOH . 
R 8 HOH AAA 49 349 157 HOH HOH . 
R 8 HOH AAA 50 350 29 HOH HOH . 
R 8 HOH AAA 51 351 11 HOH HOH . 
R 8 HOH AAA 52 352 82 HOH HOH . 
R 8 HOH AAA 53 353 75 HOH HOH . 
R 8 HOH AAA 54 354 2 HOH HOH . 
R 8 HOH AAA 55 355 28 HOH HOH . 
R 8 HOH AAA 56 356 26 HOH HOH . 
R 8 HOH AAA 57 357 52 HOH HOH . 
R 8 HOH AAA 58 358 131 HOH HOH . 
R 8 HOH AAA 59 359 15 HOH HOH . 
R 8 HOH AAA 60 360 163 HOH HOH . 
R 8 HOH AAA 61 361 23 HOH HOH . 
R 8 HOH AAA 62 362 69 HOH HOH . 
R 8 HOH AAA 63 363 43 HOH HOH . 
R 8 HOH AAA 64 364 19 HOH HOH . 
R 8 HOH AAA 65 365 100 HOH HOH . 
R 8 HOH AAA 66 366 17 HOH HOH . 
R 8 HOH AAA 67 367 81 HOH HOH . 
R 8 HOH AAA 68 368 49 HOH HOH . 
R 8 HOH AAA 69 369 55 HOH HOH . 
R 8 HOH AAA 70 370 99 HOH HOH . 
R 8 HOH AAA 71 371 41 HOH HOH . 
R 8 HOH AAA 72 372 10 HOH HOH . 
R 8 HOH AAA 73 373 44 HOH HOH . 
R 8 HOH AAA 74 374 83 HOH HOH . 
R 8 HOH AAA 75 375 63 HOH HOH . 
R 8 HOH AAA 76 376 47 HOH HOH . 
R 8 HOH AAA 77 377 77 HOH HOH . 
R 8 HOH AAA 78 378 36 HOH HOH . 
R 8 HOH AAA 79 379 86 HOH HOH . 
R 8 HOH AAA 80 380 65 HOH HOH . 
R 8 HOH AAA 81 381 143 HOH HOH . 
R 8 HOH AAA 82 382 71 HOH HOH . 
R 8 HOH AAA 83 383 50 HOH HOH . 
R 8 HOH AAA 84 384 4 HOH HOH . 
R 8 HOH AAA 85 385 56 HOH HOH . 
R 8 HOH AAA 86 386 27 HOH HOH . 
R 8 HOH AAA 87 387 138 HOH HOH . 
R 8 HOH AAA 88 388 54 HOH HOH . 
R 8 HOH AAA 89 389 24 HOH HOH . 
R 8 HOH AAA 90 390 8 HOH HOH . 
R 8 HOH AAA 91 391 9 HOH HOH . 
R 8 HOH AAA 92 392 94 HOH HOH . 
R 8 HOH AAA 93 393 48 HOH HOH . 
R 8 HOH AAA 94 394 124 HOH HOH . 
R 8 HOH AAA 95 395 168 HOH HOH . 
R 8 HOH AAA 96 396 107 HOH HOH . 
R 8 HOH AAA 97 397 85 HOH HOH . 
R 8 HOH AAA 98 398 61 HOH HOH . 
R 8 HOH AAA 99 399 158 HOH HOH . 
R 8 HOH AAA 100 400 95 HOH HOH . 
R 8 HOH AAA 101 401 57 HOH HOH . 
R 8 HOH AAA 102 402 102 HOH HOH . 
R 8 HOH AAA 103 403 152 HOH HOH . 
R 8 HOH AAA 104 404 122 HOH HOH . 
R 8 HOH AAA 105 405 141 HOH HOH . 
R 8 HOH AAA 106 406 72 HOH HOH . 
R 8 HOH AAA 107 407 153 HOH HOH . 
R 8 HOH AAA 108 408 68 HOH HOH . 
R 8 HOH AAA 109 409 40 HOH HOH . 
R 8 HOH AAA 110 410 90 HOH HOH . 
R 8 HOH AAA 111 411 66 HOH HOH . 
R 8 HOH AAA 112 412 22 HOH HOH . 
R 8 HOH AAA 113 413 166 HOH HOH . 
R 8 HOH AAA 114 414 161 HOH HOH . 
R 8 HOH AAA 115 415 80 HOH HOH . 
R 8 HOH AAA 116 416 142 HOH HOH . 
R 8 HOH AAA 117 417 116 HOH HOH . 
R 8 HOH AAA 118 418 76 HOH HOH . 
R 8 HOH AAA 119 419 39 HOH HOH . 
R 8 HOH AAA 120 420 67 HOH HOH . 
R 8 HOH AAA 121 421 105 HOH HOH . 
R 8 HOH AAA 122 422 104 HOH HOH . 
R 8 HOH AAA 123 423 74 HOH HOH . 
R 8 HOH AAA 124 424 98 HOH HOH . 
R 8 HOH AAA 125 425 101 HOH HOH . 
R 8 HOH AAA 126 426 53 HOH HOH . 
R 8 HOH AAA 127 427 167 HOH HOH . 
R 8 HOH AAA 128 428 45 HOH HOH . 
R 8 HOH AAA 129 429 164 HOH HOH . 
R 8 HOH AAA 130 430 92 HOH HOH . 
R 8 HOH AAA 131 431 84 HOH HOH . 
R 8 HOH AAA 132 432 135 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         B 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               7.736 
_atom_site.Cartn_y               14.479 
_atom_site.Cartn_z               31.596 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        17.24 
_atom_site.pdbx_formal_charge    0 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           201 
_atom_site.auth_asym_id          AAA 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           161 
_model_server_stats.create_model_time_ms    23 
_model_server_stats.query_time_ms           507 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#