data_8AJX # _model_server_result.job_id TZfXxLj7r_itFaLS_UOJ1Q _model_server_result.datetime_utc '2024-11-14 12:51:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ajx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 8AJX # _exptl.entry_id 8AJX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 134.17 _cell.angle_gamma 90 _cell.entry_id 8AJX _cell.length_a 92.061 _cell.length_b 52.237 _cell.length_c 64.957 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8AJX _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 8AJX _atom_sites.fract_transf_matrix[1][1] 0.010862 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.010554 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019144 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021464 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMN A 1 301 301 FMN FMN . C 3 FUM A 1 302 302 FUM FUM . D 4 EDO A 1 303 303 EDO EDO . E 5 HOH A 1 401 243 HOH HOH . E 5 HOH A 2 402 315 HOH HOH . E 5 HOH A 3 403 190 HOH HOH . E 5 HOH A 4 404 238 HOH HOH . E 5 HOH A 5 405 276 HOH HOH . E 5 HOH A 6 406 70 HOH HOH . E 5 HOH A 7 407 213 HOH HOH . E 5 HOH A 8 408 236 HOH HOH . E 5 HOH A 9 409 237 HOH HOH . E 5 HOH A 10 410 97 HOH HOH . E 5 HOH A 11 411 348 HOH HOH . E 5 HOH A 12 412 296 HOH HOH . E 5 HOH A 13 413 284 HOH HOH . E 5 HOH A 14 414 192 HOH HOH . E 5 HOH A 15 415 225 HOH HOH . E 5 HOH A 16 416 118 HOH HOH . E 5 HOH A 17 417 319 HOH HOH . E 5 HOH A 18 418 264 HOH HOH . E 5 HOH A 19 419 101 HOH HOH . E 5 HOH A 20 420 100 HOH HOH . E 5 HOH A 21 421 1 HOH HOH . E 5 HOH A 22 422 24 HOH HOH . E 5 HOH A 23 423 73 HOH HOH . E 5 HOH A 24 424 127 HOH HOH . E 5 HOH A 25 425 164 HOH HOH . E 5 HOH A 26 426 151 HOH HOH . E 5 HOH A 27 427 176 HOH HOH . E 5 HOH A 28 428 6 HOH HOH . E 5 HOH A 29 429 130 HOH HOH . E 5 HOH A 30 430 114 HOH HOH . E 5 HOH A 31 431 252 HOH HOH . E 5 HOH A 32 432 301 HOH HOH . E 5 HOH A 33 433 146 HOH HOH . E 5 HOH A 34 434 107 HOH HOH . E 5 HOH A 35 435 108 HOH HOH . E 5 HOH A 36 436 226 HOH HOH . E 5 HOH A 37 437 156 HOH HOH . E 5 HOH A 38 438 92 HOH HOH . E 5 HOH A 39 439 88 HOH HOH . E 5 HOH A 40 440 119 HOH HOH . E 5 HOH A 41 441 129 HOH HOH . E 5 HOH A 42 442 222 HOH HOH . E 5 HOH A 43 443 105 HOH HOH . E 5 HOH A 44 444 80 HOH HOH . E 5 HOH A 45 445 170 HOH HOH . E 5 HOH A 46 446 86 HOH HOH . E 5 HOH A 47 447 62 HOH HOH . E 5 HOH A 48 448 63 HOH HOH . E 5 HOH A 49 449 223 HOH HOH . E 5 HOH A 50 450 32 HOH HOH . E 5 HOH A 51 451 161 HOH HOH . E 5 HOH A 52 452 141 HOH HOH . E 5 HOH A 53 453 124 HOH HOH . E 5 HOH A 54 454 55 HOH HOH . E 5 HOH A 55 455 18 HOH HOH . E 5 HOH A 56 456 194 HOH HOH . E 5 HOH A 57 457 30 HOH HOH . E 5 HOH A 58 458 94 HOH HOH . E 5 HOH A 59 459 115 HOH HOH . E 5 HOH A 60 460 317 HOH HOH . E 5 HOH A 61 461 131 HOH HOH . E 5 HOH A 62 462 180 HOH HOH . E 5 HOH A 63 463 85 HOH HOH . E 5 HOH A 64 464 278 HOH HOH . E 5 HOH A 65 465 2 HOH HOH . E 5 HOH A 66 466 76 HOH HOH . E 5 HOH A 67 467 171 HOH HOH . E 5 HOH A 68 468 57 HOH HOH . E 5 HOH A 69 469 254 HOH HOH . E 5 HOH A 70 470 27 HOH HOH . E 5 HOH A 71 471 37 HOH HOH . E 5 HOH A 72 472 202 HOH HOH . E 5 HOH A 73 473 31 HOH HOH . E 5 HOH A 74 474 133 HOH HOH . E 5 HOH A 75 475 215 HOH HOH . E 5 HOH A 76 476 19 HOH HOH . E 5 HOH A 77 477 83 HOH HOH . E 5 HOH A 78 478 28 HOH HOH . E 5 HOH A 79 479 66 HOH HOH . E 5 HOH A 80 480 78 HOH HOH . E 5 HOH A 81 481 65 HOH HOH . E 5 HOH A 82 482 220 HOH HOH . E 5 HOH A 83 483 208 HOH HOH . E 5 HOH A 84 484 197 HOH HOH . E 5 HOH A 85 485 35 HOH HOH . E 5 HOH A 86 486 136 HOH HOH . E 5 HOH A 87 487 75 HOH HOH . E 5 HOH A 88 488 181 HOH HOH . E 5 HOH A 89 489 99 HOH HOH . E 5 HOH A 90 490 274 HOH HOH . E 5 HOH A 91 491 48 HOH HOH . E 5 HOH A 92 492 11 HOH HOH . E 5 HOH A 93 493 143 HOH HOH . E 5 HOH A 94 494 139 HOH HOH . E 5 HOH A 95 495 60 HOH HOH . E 5 HOH A 96 496 304 HOH HOH . E 5 HOH A 97 497 12 HOH HOH . E 5 HOH A 98 498 267 HOH HOH . E 5 HOH A 99 499 206 HOH HOH . E 5 HOH A 100 500 39 HOH HOH . E 5 HOH A 101 501 68 HOH HOH . E 5 HOH A 102 502 69 HOH HOH . E 5 HOH A 103 503 201 HOH HOH . E 5 HOH A 104 504 103 HOH HOH . E 5 HOH A 105 505 318 HOH HOH . E 5 HOH A 106 506 54 HOH HOH . E 5 HOH A 107 507 33 HOH HOH . E 5 HOH A 108 508 3 HOH HOH . E 5 HOH A 109 509 74 HOH HOH . E 5 HOH A 110 510 16 HOH HOH . E 5 HOH A 111 511 56 HOH HOH . E 5 HOH A 112 512 216 HOH HOH . E 5 HOH A 113 513 122 HOH HOH . E 5 HOH A 114 514 299 HOH HOH . E 5 HOH A 115 515 111 HOH HOH . E 5 HOH A 116 516 71 HOH HOH . E 5 HOH A 117 517 13 HOH HOH . E 5 HOH A 118 518 93 HOH HOH . E 5 HOH A 119 519 14 HOH HOH . E 5 HOH A 120 520 255 HOH HOH . E 5 HOH A 121 521 187 HOH HOH . E 5 HOH A 122 522 79 HOH HOH . E 5 HOH A 123 523 20 HOH HOH . E 5 HOH A 124 524 5 HOH HOH . E 5 HOH A 125 525 240 HOH HOH . E 5 HOH A 126 526 61 HOH HOH . E 5 HOH A 127 527 25 HOH HOH . E 5 HOH A 128 528 91 HOH HOH . E 5 HOH A 129 529 15 HOH HOH . E 5 HOH A 130 530 221 HOH HOH . E 5 HOH A 131 531 67 HOH HOH . E 5 HOH A 132 532 96 HOH HOH . E 5 HOH A 133 533 140 HOH HOH . E 5 HOH A 134 534 26 HOH HOH . E 5 HOH A 135 535 126 HOH HOH . E 5 HOH A 136 536 189 HOH HOH . E 5 HOH A 137 537 9 HOH HOH . E 5 HOH A 138 538 345 HOH HOH . E 5 HOH A 139 539 121 HOH HOH . E 5 HOH A 140 540 58 HOH HOH . E 5 HOH A 141 541 46 HOH HOH . E 5 HOH A 142 542 10 HOH HOH . E 5 HOH A 143 543 52 HOH HOH . E 5 HOH A 144 544 29 HOH HOH . E 5 HOH A 145 545 271 HOH HOH . E 5 HOH A 146 546 160 HOH HOH . E 5 HOH A 147 547 228 HOH HOH . E 5 HOH A 148 548 253 HOH HOH . E 5 HOH A 149 549 43 HOH HOH . E 5 HOH A 150 550 82 HOH HOH . E 5 HOH A 151 551 145 HOH HOH . E 5 HOH A 152 552 4 HOH HOH . E 5 HOH A 153 553 204 HOH HOH . E 5 HOH A 154 554 159 HOH HOH . E 5 HOH A 155 555 179 HOH HOH . E 5 HOH A 156 556 45 HOH HOH . E 5 HOH A 157 557 23 HOH HOH . E 5 HOH A 158 558 246 HOH HOH . E 5 HOH A 159 559 272 HOH HOH . E 5 HOH A 160 560 165 HOH HOH . E 5 HOH A 161 561 49 HOH HOH . E 5 HOH A 162 562 38 HOH HOH . E 5 HOH A 163 563 47 HOH HOH . E 5 HOH A 164 564 123 HOH HOH . E 5 HOH A 165 565 84 HOH HOH . E 5 HOH A 166 566 128 HOH HOH . E 5 HOH A 167 567 218 HOH HOH . E 5 HOH A 168 568 87 HOH HOH . E 5 HOH A 169 569 157 HOH HOH . E 5 HOH A 170 570 305 HOH HOH . E 5 HOH A 171 571 153 HOH HOH . E 5 HOH A 172 572 64 HOH HOH . E 5 HOH A 173 573 109 HOH HOH . E 5 HOH A 174 574 337 HOH HOH . E 5 HOH A 175 575 148 HOH HOH . E 5 HOH A 176 576 95 HOH HOH . E 5 HOH A 177 577 282 HOH HOH . E 5 HOH A 178 578 41 HOH HOH . E 5 HOH A 179 579 149 HOH HOH . E 5 HOH A 180 580 36 HOH HOH . E 5 HOH A 181 581 98 HOH HOH . E 5 HOH A 182 582 21 HOH HOH . E 5 HOH A 183 583 147 HOH HOH . E 5 HOH A 184 584 231 HOH HOH . E 5 HOH A 185 585 7 HOH HOH . E 5 HOH A 186 586 77 HOH HOH . E 5 HOH A 187 587 193 HOH HOH . E 5 HOH A 188 588 144 HOH HOH . E 5 HOH A 189 589 316 HOH HOH . E 5 HOH A 190 590 241 HOH HOH . E 5 HOH A 191 591 281 HOH HOH . E 5 HOH A 192 592 137 HOH HOH . E 5 HOH A 193 593 34 HOH HOH . E 5 HOH A 194 594 233 HOH HOH . E 5 HOH A 195 595 285 HOH HOH . E 5 HOH A 196 596 44 HOH HOH . E 5 HOH A 197 597 152 HOH HOH . E 5 HOH A 198 598 239 HOH HOH . E 5 HOH A 199 599 110 HOH HOH . E 5 HOH A 200 600 142 HOH HOH . E 5 HOH A 201 601 279 HOH HOH . E 5 HOH A 202 602 53 HOH HOH . E 5 HOH A 203 603 42 HOH HOH . E 5 HOH A 204 604 247 HOH HOH . E 5 HOH A 205 605 22 HOH HOH . E 5 HOH A 206 606 172 HOH HOH . E 5 HOH A 207 607 17 HOH HOH . E 5 HOH A 208 608 245 HOH HOH . E 5 HOH A 209 609 72 HOH HOH . E 5 HOH A 210 610 113 HOH HOH . E 5 HOH A 211 611 158 HOH HOH . E 5 HOH A 212 612 8 HOH HOH . E 5 HOH A 213 613 308 HOH HOH . E 5 HOH A 214 614 227 HOH HOH . E 5 HOH A 215 615 262 HOH HOH . E 5 HOH A 216 616 132 HOH HOH . E 5 HOH A 217 617 258 HOH HOH . E 5 HOH A 218 618 349 HOH HOH . E 5 HOH A 219 619 259 HOH HOH . E 5 HOH A 220 620 166 HOH HOH . E 5 HOH A 221 621 125 HOH HOH . E 5 HOH A 222 622 229 HOH HOH . E 5 HOH A 223 623 120 HOH HOH . E 5 HOH A 224 624 266 HOH HOH . E 5 HOH A 225 625 89 HOH HOH . E 5 HOH A 226 626 268 HOH HOH . E 5 HOH A 227 627 307 HOH HOH . E 5 HOH A 228 628 211 HOH HOH . E 5 HOH A 229 629 275 HOH HOH . E 5 HOH A 230 630 182 HOH HOH . E 5 HOH A 231 631 188 HOH HOH . E 5 HOH A 232 632 150 HOH HOH . E 5 HOH A 233 633 212 HOH HOH . E 5 HOH A 234 634 257 HOH HOH . E 5 HOH A 235 635 346 HOH HOH . E 5 HOH A 236 636 235 HOH HOH . E 5 HOH A 237 637 178 HOH HOH . E 5 HOH A 238 638 261 HOH HOH . E 5 HOH A 239 639 162 HOH HOH . E 5 HOH A 240 640 329 HOH HOH . E 5 HOH A 241 641 90 HOH HOH . E 5 HOH A 242 642 217 HOH HOH . E 5 HOH A 243 643 135 HOH HOH . E 5 HOH A 244 644 154 HOH HOH . E 5 HOH A 245 645 314 HOH HOH . E 5 HOH A 246 646 186 HOH HOH . E 5 HOH A 247 647 270 HOH HOH . E 5 HOH A 248 648 292 HOH HOH . E 5 HOH A 249 649 283 HOH HOH . E 5 HOH A 250 650 191 HOH HOH . E 5 HOH A 251 651 50 HOH HOH . E 5 HOH A 252 652 169 HOH HOH . E 5 HOH A 253 653 224 HOH HOH . E 5 HOH A 254 654 209 HOH HOH . E 5 HOH A 255 655 167 HOH HOH . E 5 HOH A 256 656 134 HOH HOH . E 5 HOH A 257 657 199 HOH HOH . E 5 HOH A 258 658 293 HOH HOH . E 5 HOH A 259 659 290 HOH HOH . E 5 HOH A 260 660 205 HOH HOH . E 5 HOH A 261 661 260 HOH HOH . E 5 HOH A 262 662 175 HOH HOH . E 5 HOH A 263 663 219 HOH HOH . E 5 HOH A 264 664 210 HOH HOH . E 5 HOH A 265 665 313 HOH HOH . E 5 HOH A 266 666 116 HOH HOH . E 5 HOH A 267 667 251 HOH HOH . E 5 HOH A 268 668 155 HOH HOH . E 5 HOH A 269 669 244 HOH HOH . E 5 HOH A 270 670 230 HOH HOH . E 5 HOH A 271 671 250 HOH HOH . E 5 HOH A 272 672 177 HOH HOH . E 5 HOH A 273 673 104 HOH HOH . E 5 HOH A 274 674 138 HOH HOH . E 5 HOH A 275 675 200 HOH HOH . E 5 HOH A 276 676 203 HOH HOH . E 5 HOH A 277 677 51 HOH HOH . E 5 HOH A 278 678 59 HOH HOH . E 5 HOH A 279 679 242 HOH HOH . E 5 HOH A 280 680 196 HOH HOH . E 5 HOH A 281 681 40 HOH HOH . E 5 HOH A 282 682 198 HOH HOH . E 5 HOH A 283 683 195 HOH HOH . E 5 HOH A 284 684 288 HOH HOH . E 5 HOH A 285 685 163 HOH HOH . E 5 HOH A 286 686 300 HOH HOH . E 5 HOH A 287 687 106 HOH HOH . E 5 HOH A 288 688 207 HOH HOH . E 5 HOH A 289 689 214 HOH HOH . E 5 HOH A 290 690 256 HOH HOH . E 5 HOH A 291 691 277 HOH HOH . E 5 HOH A 292 692 286 HOH HOH . E 5 HOH A 293 693 117 HOH HOH . E 5 HOH A 294 694 298 HOH HOH . E 5 HOH A 295 695 280 HOH HOH . E 5 HOH A 296 696 309 HOH HOH . E 5 HOH A 297 697 81 HOH HOH . E 5 HOH A 298 698 168 HOH HOH . E 5 HOH A 299 699 102 HOH HOH . E 5 HOH A 300 700 289 HOH HOH . E 5 HOH A 301 701 295 HOH HOH . E 5 HOH A 302 702 311 HOH HOH . E 5 HOH A 303 703 269 HOH HOH . E 5 HOH A 304 704 112 HOH HOH . E 5 HOH A 305 705 174 HOH HOH . E 5 HOH A 306 706 234 HOH HOH . E 5 HOH A 307 707 248 HOH HOH . E 5 HOH A 308 708 173 HOH HOH . E 5 HOH A 309 709 185 HOH HOH . E 5 HOH A 310 710 184 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 4 8.857 -12.276 -6.185 1 14.79 ? C1 EDO 303 A 1 HETATM 2 O O1 EDO . . . D 4 9.466 -11.015 -6.501 1 20.28 ? O1 EDO 303 A 1 HETATM 3 C C2 EDO . . . D 4 7.807 -12.621 -7.183 1 16.9 ? C2 EDO 303 A 1 HETATM 4 O O2 EDO . . . D 4 6.845 -11.598 -7.397 1 13.45 ? O2 EDO 303 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 416 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 4 #