data_8AK6 # _model_server_result.job_id tlhLyi1csbt5lW5K_r-1Jg _model_server_result.datetime_utc '2024-11-29 14:05:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ak6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":402}' # _entry.id 8AK6 # _exptl.entry_id 8AK6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8AK6 _cell.length_a 90.995 _cell.length_b 90.995 _cell.length_c 144.163 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8AK6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,L,M,S 1 1 B,N,O,P,Q,R,T 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 135 A CYS 141 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? metalc ? metalc2 A SG CYS 138 A CYS 144 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.968 ? metalc ? metalc3 A SG CYS 160 A CYS 166 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? metalc ? metalc4 A SG CYS 171 A CYS 177 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.535 ? metalc ? metalc5 B SG CYS 135 B CYS 141 1_555 O ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? metalc ? metalc6 B SG CYS 138 B CYS 144 1_555 O ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? metalc ? metalc7 B SG CYS 160 B CYS 166 1_555 O ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc8 B SG CYS 171 B CYS 177 1_555 O ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.557 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8AK6 _atom_sites.fract_transf_matrix[1][1] 0.01099 _atom_sites.fract_transf_matrix[1][2] 0.006345 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01269 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006937 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 AR6 A 1 401 500 AR6 AR6 . D 3 ZN A 1 402 501 ZN ZN . E 4 08D A 1 403 502 08D 08D . F 5 PEG A 1 404 503 PEG PEG . G 6 EDO A 1 405 505 EDO EDO . H 6 EDO A 1 406 506 EDO EDO . I 6 EDO A 1 407 503 EDO EDO . J 7 SO4 A 1 408 1 SO4 SO4 . K 7 SO4 A 1 409 3 SO4 SO4 . L 7 SO4 A 1 410 4 SO4 SO4 . M 7 SO4 A 1 411 5 SO4 SO4 . N 2 AR6 B 1 401 500 AR6 AR6 . O 3 ZN B 1 402 501 ZN ZN . P 4 08D B 1 403 502 08D 08D . Q 6 EDO B 1 404 504 EDO EDO . R 7 SO4 B 1 405 2 SO4 SO4 . S 8 HOH A 1 501 12 HOH HOH . S 8 HOH A 2 502 32 HOH HOH . S 8 HOH A 3 503 5 HOH HOH . S 8 HOH A 4 504 2 HOH HOH . S 8 HOH A 5 505 45 HOH HOH . S 8 HOH A 6 506 44 HOH HOH . S 8 HOH A 7 507 10 HOH HOH . S 8 HOH A 8 508 35 HOH HOH . S 8 HOH A 9 509 23 HOH HOH . S 8 HOH A 10 510 54 HOH HOH . S 8 HOH A 11 511 6 HOH HOH . S 8 HOH A 12 512 42 HOH HOH . S 8 HOH A 13 513 15 HOH HOH . S 8 HOH A 14 514 19 HOH HOH . S 8 HOH A 15 515 29 HOH HOH . S 8 HOH A 16 516 55 HOH HOH . S 8 HOH A 17 517 33 HOH HOH . S 8 HOH A 18 518 27 HOH HOH . S 8 HOH A 19 519 25 HOH HOH . S 8 HOH A 20 520 52 HOH HOH . S 8 HOH A 21 521 36 HOH HOH . S 8 HOH A 22 522 26 HOH HOH . S 8 HOH A 23 523 39 HOH HOH . S 8 HOH A 24 524 1 HOH HOH . S 8 HOH A 25 525 50 HOH HOH . S 8 HOH A 26 526 46 HOH HOH . S 8 HOH A 27 527 43 HOH HOH . S 8 HOH A 28 528 47 HOH HOH . S 8 HOH A 29 529 49 HOH HOH . S 8 HOH A 30 530 17 HOH HOH . S 8 HOH A 31 531 53 HOH HOH . S 8 HOH A 32 532 34 HOH HOH . S 8 HOH A 33 533 31 HOH HOH . T 8 HOH B 1 501 3 HOH HOH . T 8 HOH B 2 502 30 HOH HOH . T 8 HOH B 3 503 7 HOH HOH . T 8 HOH B 4 504 22 HOH HOH . T 8 HOH B 5 505 8 HOH HOH . T 8 HOH B 6 506 41 HOH HOH . T 8 HOH B 7 507 20 HOH HOH . T 8 HOH B 8 508 24 HOH HOH . T 8 HOH B 9 509 38 HOH HOH . T 8 HOH B 10 510 21 HOH HOH . T 8 HOH B 11 511 28 HOH HOH . T 8 HOH B 12 512 18 HOH HOH . T 8 HOH B 13 513 9 HOH HOH . T 8 HOH B 14 514 13 HOH HOH . T 8 HOH B 15 515 40 HOH HOH . T 8 HOH B 16 516 37 HOH HOH . T 8 HOH B 17 517 48 HOH HOH . T 8 HOH B 18 518 4 HOH HOH . T 8 HOH B 19 519 14 HOH HOH . T 8 HOH B 20 520 51 HOH HOH . T 8 HOH B 21 521 11 HOH HOH . T 8 HOH B 22 522 16 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x -3.827 _atom_site.Cartn_y 27.48 _atom_site.Cartn_z 1.496 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 78.93 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 402 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 351 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 1 #