data_8AMR # _model_server_result.job_id Mm1jPyJXF0UJHNh7BXMqGQ _model_server_result.datetime_utc '2024-12-22 02:43:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8amr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":401}' # _entry.id 8AMR # _exptl.entry_id 8AMR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 370.436 _entity.id 2 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8AMR _cell.length_a 167.9 _cell.length_b 167.9 _cell.length_c 127.2 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8AMR _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall 'P 4abw 2nw' _symmetry.space_group_name_H-M 'P 41 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,F 1 1 A,F 1 2 B,C,D,E,G,H 2 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 -y,-x,-z+1/2 0 -1 0 -1 0 0 0 0 -1 0 0 63.6 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C16 H34 O9' _chem_comp.formula_weight 370.436 _chem_comp.id PE8 _chem_comp.mon_nstd_flag . _chem_comp.name 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 PE8 sing 250 n n O1 HO1 PE8 sing 251 n n C2 C3 PE8 sing 252 n n C2 H21 PE8 sing 253 n n C2 H22 PE8 sing 254 n n C3 O4 PE8 sing 255 n n C3 H31 PE8 sing 256 n n C3 H32 PE8 sing 257 n n O4 C5 PE8 sing 258 n n C5 C6 PE8 sing 259 n n C5 H51 PE8 sing 260 n n C5 H52 PE8 sing 261 n n C6 O7 PE8 sing 262 n n C6 H61 PE8 sing 263 n n C6 H62 PE8 sing 264 n n O7 C8 PE8 sing 265 n n C8 C9 PE8 sing 266 n n C8 H81 PE8 sing 267 n n C8 H82 PE8 sing 268 n n C9 O10 PE8 sing 269 n n C9 H91 PE8 sing 270 n n C9 H92 PE8 sing 271 n n O10 C11 PE8 sing 272 n n C11 C12 PE8 sing 273 n n C11 H111 PE8 sing 274 n n C11 H112 PE8 sing 275 n n C12 O13 PE8 sing 276 n n C12 H121 PE8 sing 277 n n C12 H122 PE8 sing 278 n n O13 C14 PE8 sing 279 n n C14 C15 PE8 sing 280 n n C14 H141 PE8 sing 281 n n C14 H142 PE8 sing 282 n n C15 O16 PE8 sing 283 n n C15 H151 PE8 sing 284 n n C15 H152 PE8 sing 285 n n O16 C17 PE8 sing 286 n n C17 C18 PE8 sing 287 n n C17 H171 PE8 sing 288 n n C17 H172 PE8 sing 289 n n C18 O19 PE8 sing 290 n n C18 H181 PE8 sing 291 n n C18 H182 PE8 sing 292 n n O19 C20 PE8 sing 293 n n C20 C21 PE8 sing 294 n n C20 H201 PE8 sing 295 n n C20 H202 PE8 sing 296 n n C21 O22 PE8 sing 297 n n C21 H211 PE8 sing 298 n n C21 H212 PE8 sing 299 n n O22 C23 PE8 sing 300 n n C23 C24 PE8 sing 301 n n C23 H231 PE8 sing 302 n n C23 H232 PE8 sing 303 n n C24 O25 PE8 sing 304 n n C24 H241 PE8 sing 305 n n C24 H242 PE8 sing 306 n n O25 H25 PE8 sing 307 n n # _atom_sites.entry_id 8AMR _atom_sites.fract_transf_matrix[1][1] 0.005956 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005956 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007862 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 PE8 B 1 401 2 PE8 PE8 . E 3 GOL B 1 402 1 GOL GOL . F 4 HOH A 1 401 2 HOH HOH . F 4 HOH A 2 402 7 HOH HOH . G 4 HOH B 1 501 9 HOH HOH . G 4 HOH B 2 502 5 HOH HOH . G 4 HOH B 3 503 3 HOH HOH . G 4 HOH B 4 504 8 HOH HOH . H 4 HOH C 1 401 6 HOH HOH . H 4 HOH C 2 402 1 HOH HOH . H 4 HOH C 3 403 4 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O13 PE8 . . . D 2 33.926 -39.479 37.966 1 130.45 ? O13 PE8 401 B 1 HETATM 2 C C14 PE8 . . . D 2 35.305 -39.723 37.678 1 153.74 ? C14 PE8 401 B 1 HETATM 3 C C15 PE8 . . . D 2 35.963 -40.396 38.884 1 207.91 ? C15 PE8 401 B 1 HETATM 4 O O16 PE8 . . . D 2 35.936 -39.503 40.001 1 223.9 ? O16 PE8 401 B 1 HETATM 5 C C17 PE8 . . . D 2 36.891 -38.458 39.8 1 137.36 ? C17 PE8 401 B 1 HETATM 6 C C18 PE8 . . . D 2 38.303 -39.024 39.971 1 154.49 ? C18 PE8 401 B 1 HETATM 7 O O19 PE8 . . . D 2 39.092 -38.721 38.816 1 183.28 ? O19 PE8 401 B 1 HETATM 8 C C20 PE8 . . . D 2 39.726 -39.918 38.353 1 205.16 ? C20 PE8 401 B 1 HETATM 9 C C21 PE8 . . . D 2 41.138 -39.599 37.856 1 165.28 ? C21 PE8 401 B 1 HETATM 10 O O22 PE8 . . . D 2 42.084 -40.415 38.553 1 208.95 ? O22 PE8 401 B 1 HETATM 11 C C23 PE8 . . . D 2 41.938 -40.216 39.963 1 209.74 ? C23 PE8 401 B 1 HETATM 12 C C24 PE8 . . . D 2 42.918 -41.117 40.72 1 142.65 ? C24 PE8 401 B 1 HETATM 13 O O25 PE8 . . . D 2 44.246 -40.609 40.573 1 169.42 ? O25 PE8 401 B 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 229 _model_server_stats.encode_time_ms 15 _model_server_stats.element_count 13 #