data_8APJ
#
_model_server_result.job_id            '_eo-dtRbHrxdSufKnQrSng' 
_model_server_result.datetime_utc      '2024-12-18 18:53:00' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8apj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"IB","auth_seq_id":204}' 
#
_entry.id    8APJ 
#
_exptl.entry_id    8APJ 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              510.615 
_entity.id                          28 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DODECYL-BETA-D-MALTOSIDE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8APJ 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8APJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    42-meric 
_pdbx_struct_assembly.oligomeric_count      42 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB,VB,WB,XB,YB,ZB 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 28 ZA N N 
? 28 IB N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 F C AME 1 e AME 1 1_555 F N GLN 2 e GLN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
metalc ? metalc1 KA OG1 THR 213 A1 THR 213 1_555 RB MG MG . A1 MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.979 ? 
metalc ? metalc2 QB O2G ATP . A1 ATP 601 1_555 RB MG MG . A1 MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.954 ? 
metalc ? metalc3 QB O2B ATP . A1 ATP 601 1_555 RB MG MG . A1 MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.974 ? 
metalc ? metalc4 LA OG1 THR 213 B1 THR 213 1_555 TB MG MG . B1 MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.948 ? 
metalc ? metalc5 SB O2G ATP . B1 ATP 601 1_555 TB MG MG . B1 MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.885 ? 
metalc ? metalc6 SB O2B ATP . B1 ATP 601 1_555 TB MG MG . B1 MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.992 ? 
metalc ? metalc7 MA OG1 THR 213 C1 THR 213 1_555 VB MG MG . C1 MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.184 ? 
metalc ? metalc8 UB O2G ATP . C1 ATP 601 1_555 VB MG MG . C1 MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.938 ? 
metalc ? metalc9 UB O2B ATP . C1 ATP 601 1_555 VB MG MG . C1 MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.899 ? 
metalc ? metalc10 NA OG1 THR 190 D1 THR 190 1_555 XB MG MG . D1 MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.902 ? 
metalc ? metalc11 WB O2G ATP . D1 ATP 601 1_555 XB MG MG . D1 MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.965 ? 
metalc ? metalc12 WB O2B ATP . D1 ATP 601 1_555 XB MG MG . D1 MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.94 ? 
metalc ? metalc13 OA OG1 THR 190 E1 THR 190 1_555 ZB MG MG . E1 MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? 
metalc ? metalc14 YB O3B ADP . E1 ADP 601 1_555 ZB MG MG . E1 MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? 
#
_chem_comp.formula           'C24 H46 O11' 
_chem_comp.formula_weight    510.615 
_chem_comp.id                LMT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DODECYL-BETA-D-MALTOSIDE 
_chem_comp.type              d-saccharide 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     8APJ 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
QA 26 CDL L 1 101 12 CDL CDL . 
RA 26 CDL M 1 201 1 CDL CDL . 
SA 27 PEE M 1 202 2 PEE PEE . 
TA 26 CDL c 1 201 3 CDL CDL . 
UA 26 CDL e 1 401 2 CDL CDL . 
VA 26 CDL e 1 402 5 CDL CDL . 
WA 26 CDL e 1 403 7 CDL CDL . 
XA 26 CDL e 1 404 10 CDL CDL . 
YA 26 CDL e 1 405 11 CDL CDL . 
ZA 28 LMT e 1 406 1 LMT LMT . 
AB 29 Q7G e 1 407 2 Q7G GD0 . 
BB 26 CDL f 1 201 9 CDL CDL . 
CB 27 PEE f 1 202 1 PEE PEE . 
DB 30 PC1 f 1 203 2 PC1 PC1 . 
EB 30 PC1 i 1 201 4 PC1 PC1 . 
FB 26 CDL j 1 201 4 CDL CDL . 
GB 26 CDL j 1 202 6 CDL CDL . 
HB 30 PC1 j 1 203 3 PC1 PC1 . 
IB 28 LMT j 1 204 2 LMT LMT . 
JB 26 CDL l 1 101 12 CDL CDL . 
KB 26 CDL m 1 201 1 CDL CDL . 
LB 27 PEE m 1 202 2 PEE PEE . 
MB 29 Q7G n 1 201 1 Q7G GD0 . 
NB 30 PC1 p 1 201 1 PC1 PC1 . 
OB 26 CDL q 1 101 8 CDL CDL . 
PB 31 UTP H1 1 201 1 UTP UTP . 
QB 32 ATP A1 1 601 5 ATP ATP . 
RB 33 MG A1 1 602 6 MG MG . 
SB 32 ATP B1 1 601 1 ATP ATP . 
TB 33 MG B1 1 602 2 MG MG . 
UB 32 ATP C1 1 601 3 ATP ATP . 
VB 33 MG C1 1 602 4 MG MG . 
WB 32 ATP D1 1 601 7 ATP ATP . 
XB 33 MG D1 1 602 8 MG MG . 
YB 34 ADP E1 1 601 1 ADP ADP . 
ZB 33 MG E1 1 602 2 MG MG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1B LMT . . . IB 28 312.255 274.357 150.962 1 50.36 ? C1B LMT 204 j 1 
HETATM 2 C C2B LMT . . . IB 28 310.745 274.233 151.115 1 50.36 ? C2B LMT 204 j 1 
HETATM 3 C C3B LMT . . . IB 28 310.419 273.263 152.241 1 50.36 ? C3B LMT 204 j 1 
HETATM 4 C C4B LMT . . . IB 28 311.119 271.932 152.006 1 50.36 ? C4B LMT 204 j 1 
HETATM 5 C C5B LMT . . . IB 28 312.616 272.163 151.826 1 50.36 ? C5B LMT 204 j 1 
HETATM 6 C C6B LMT . . . IB 28 313.367 270.898 151.486 1 50.36 ? C6B LMT 204 j 1 
HETATM 7 O O1B LMT . . . IB 28 312.773 274.927 152.139 1 50.36 ? O1B LMT 204 j 1 
HETATM 8 O O2B LMT . . . IB 28 310.181 275.511 151.391 1 50.36 ? O2B LMT 204 j 1 
HETATM 9 O O3B LMT . . . IB 28 309.012 273.065 152.323 1 50.36 ? O3B LMT 204 j 1 
HETATM 10 O O4' LMT . . . IB 28 310.907 271.065 153.115 1 50.36 ? O4' LMT 204 j 1 
HETATM 11 O O5B LMT . . . IB 28 312.836 273.083 150.745 1 50.36 ? O5B LMT 204 j 1 
HETATM 12 O O6B LMT . . . IB 28 313.204 269.911 152.494 1 50.36 ? O6B LMT 204 j 1 
HETATM 13 C C1' LMT . . . IB 28 315.59 277.758 153.262 1 50.36 ? C1' LMT 204 j 1 
HETATM 14 C C2' LMT . . . IB 28 314.295 278.297 152.669 1 50.36 ? C2' LMT 204 j 1 
HETATM 15 C C3' LMT . . . IB 28 313.226 277.214 152.686 1 50.36 ? C3' LMT 204 j 1 
HETATM 16 C C4' LMT . . . IB 28 313.751 275.968 151.994 1 50.36 ? C4' LMT 204 j 1 
HETATM 17 C C5' LMT . . . IB 28 315.061 275.524 152.628 1 50.36 ? C5' LMT 204 j 1 
HETATM 18 C C6' LMT . . . IB 28 315.693 274.342 151.93 1 50.36 ? C6' LMT 204 j 1 
HETATM 19 O O1' LMT . . . IB 28 316.568 278.75 153.138 1 50.36 ? O1' LMT 204 j 1 
HETATM 20 O O2' LMT . . . IB 28 313.853 279.427 153.415 1 50.36 ? O2' LMT 204 j 1 
HETATM 21 O O3' LMT . . . IB 28 312.049 277.68 152.035 1 50.36 ? O3' LMT 204 j 1 
HETATM 22 O O5' LMT . . . IB 28 316.008 276.601 152.561 1 50.36 ? O5' LMT 204 j 1 
HETATM 23 O O6' LMT . . . IB 28 316.926 273.98 152.535 1 50.36 ? O6' LMT 204 j 1 
HETATM 24 C C1 LMT . . . IB 28 316.659 279.635 154.257 1 50.36 ? C1 LMT 204 j 1 
HETATM 25 C C2 LMT . . . IB 28 318.033 279.498 154.865 1 50.36 ? C2 LMT 204 j 1 
HETATM 26 C C3 LMT . . . IB 28 318.333 280.516 155.954 1 50.36 ? C3 LMT 204 j 1 
HETATM 27 C C4 LMT . . . IB 28 318.227 281.96 155.493 1 50.36 ? C4 LMT 204 j 1 
HETATM 28 C C5 LMT . . . IB 28 319.133 282.923 156.244 1 50.36 ? C5 LMT 204 j 1 
HETATM 29 C C6 LMT . . . IB 28 318.828 283.064 157.726 1 50.36 ? C6 LMT 204 j 1 
HETATM 30 C C7 LMT . . . IB 28 317.475 283.687 158.028 1 50.36 ? C7 LMT 204 j 1 
HETATM 31 C C8 LMT . . . IB 28 317.363 284.27 159.429 1 50.36 ? C8 LMT 204 j 1 
HETATM 32 C C9 LMT . . . IB 28 317.681 283.288 160.545 1 50.36 ? C9 LMT 204 j 1 
HETATM 33 C C10 LMT . . . IB 28 317.654 283.906 161.932 1 50.36 ? C10 LMT 204 j 1 
HETATM 34 C C11 LMT . . . IB 28 318.063 282.954 163.037 1 50.36 ? C11 LMT 204 j 1 
HETATM 35 C C12 LMT . . . IB 28 318.107 283.61 164.389 1 50.36 ? C12 LMT 204 j 1 
HETATM 36 H H1B LMT . . . IB 28 312.523 274.876 150.044 1 50.36 ? H1B LMT 204 j 1 
HETATM 37 H H2B LMT . . . IB 28 310.319 273.872 150.18 1 50.36 ? H2B LMT 204 j 1 
HETATM 38 H H3B LMT . . . IB 28 310.77 273.676 153.185 1 50.36 ? H3B LMT 204 j 1 
HETATM 39 H H4B LMT . . . IB 28 310.715 271.468 151.108 1 50.36 ? H4B LMT 204 j 1 
HETATM 40 H H5B LMT . . . IB 28 313.025 272.563 152.752 1 50.36 ? H5B LMT 204 j 1 
HETATM 41 H "H6'2" LMT . . . IB 28 312.959 270.434 150.59 1 50.36 ? "H6'2" LMT 204 j 1 
HETATM 42 H "H6'1" LMT . . . IB 28 314.42 271.093 151.289 1 50.36 ? "H6'1" LMT 204 j 1 
HETATM 43 H H1' LMT . . . IB 28 315.447 277.503 154.31 1 50.36 ? H1' LMT 204 j 1 
HETATM 44 H H2' LMT . . . IB 28 314.465 278.595 151.637 1 50.36 ? H2' LMT 204 j 1 
HETATM 45 H H3' LMT . . . IB 28 312.975 276.968 153.716 1 50.36 ? H3' LMT 204 j 1 
HETATM 46 H H4' LMT . . . IB 28 313.929 276.193 150.945 1 50.36 ? H4' LMT 204 j 1 
HETATM 47 H H5' LMT . . . IB 28 314.889 275.262 153.67 1 50.36 ? H5' LMT 204 j 1 
HETATM 48 H H6D LMT . . . IB 28 315.958 274.6 150.905 1 50.36 ? H6D LMT 204 j 1 
HETATM 49 H H6E LMT . . . IB 28 315.013 273.494 151.877 1 50.36 ? H6E LMT 204 j 1 
HETATM 50 H H12 LMT . . . IB 28 315.9 279.424 155.008 1 50.36 ? H12 LMT 204 j 1 
HETATM 51 H H11 LMT . . . IB 28 316.48 280.657 153.926 1 50.36 ? H11 LMT 204 j 1 
HETATM 52 H H22 LMT . . . IB 28 318.788 279.566 154.083 1 50.36 ? H22 LMT 204 j 1 
HETATM 53 H H21 LMT . . . IB 28 318.158 278.491 155.261 1 50.36 ? H21 LMT 204 j 1 
HETATM 54 H H32 LMT . . . IB 28 319.329 280.337 156.357 1 50.36 ? H32 LMT 204 j 1 
HETATM 55 H H31 LMT . . . IB 28 317.666 280.354 156.798 1 50.36 ? H31 LMT 204 j 1 
HETATM 56 H H42 LMT . . . IB 28 318.44 282.016 154.427 1 50.36 ? H42 LMT 204 j 1 
HETATM 57 H H41 LMT . . . IB 28 317.194 282.292 155.577 1 50.36 ? H41 LMT 204 j 1 
HETATM 58 H H52 LMT . . . IB 28 319.085 283.904 155.774 1 50.36 ? H52 LMT 204 j 1 
HETATM 59 H H51 LMT . . . IB 28 320.17 282.616 156.117 1 50.36 ? H51 LMT 204 j 1 
HETATM 60 H H62 LMT . . . IB 28 319.612 283.648 158.205 1 50.36 ? H62 LMT 204 j 1 
HETATM 61 H H61 LMT . . . IB 28 318.895 282.088 158.204 1 50.36 ? H61 LMT 204 j 1 
HETATM 62 H H72 LMT . . . IB 28 317.261 284.462 157.294 1 50.36 ? H72 LMT 204 j 1 
HETATM 63 H H71 LMT . . . IB 28 316.69 282.948 157.876 1 50.36 ? H71 LMT 204 j 1 
HETATM 64 H H82 LMT . . . IB 28 318.016 285.138 159.514 1 50.36 ? H82 LMT 204 j 1 
HETATM 65 H H81 LMT . . . IB 28 316.362 284.674 159.576 1 50.36 ? H81 LMT 204 j 1 
HETATM 66 H H92 LMT . . . IB 28 318.655 282.834 160.374 1 50.36 ? H92 LMT 204 j 1 
HETATM 67 H H91 LMT . . . IB 28 316.984 282.453 160.506 1 50.36 ? H91 LMT 204 j 1 
HETATM 68 H H102 LMT . . . IB 28 316.659 284.295 162.139 1 50.36 ? H102 LMT 204 j 1 
HETATM 69 H H101 LMT . . . IB 28 318.295 284.785 161.955 1 50.36 ? H101 LMT 204 j 1 
HETATM 70 H H112 LMT . . . IB 28 319.034 282.517 162.812 1 50.36 ? H112 LMT 204 j 1 
HETATM 71 H H111 LMT . . . IB 28 317.381 282.106 163.064 1 50.36 ? H111 LMT 204 j 1 
HETATM 72 H H123 LMT . . . IB 28 318.408 282.91 165.166 1 50.36 ? H123 LMT 204 j 1 
HETATM 73 H H122 LMT . . . IB 28 317.139 284.012 164.682 1 50.36 ? H122 LMT 204 j 1 
HETATM 74 H H121 LMT . . . IB 28 318.811 284.439 164.423 1 50.36 ? H121 LMT 204 j 1 
#
_model_server_stats.io_time_ms              42 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    251 
_model_server_stats.query_time_ms           347 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           74 
#