data_8AQ2 # _model_server_result.job_id eoU6D9n47x-9OhUV-ydHYg _model_server_result.datetime_utc '2024-11-26 04:42:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8aq2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":606}' # _entry.id 8AQ2 # _exptl.entry_id 8AQ2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8AQ2 _cell.length_a 78.06 _cell.length_b 116.23 _cell.length_c 73.22 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8AQ2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 133 A CYS 113 1_555 M C01 QGT . A QGT 612 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.474 ? covale ? covale2 A SG CYS 402 A CYS 382 1_555 L C01 QGT . A QGT 611 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.413 ? # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id OLC _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-Oleoyl-R-glycerol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C17 OLC sing 267 n n C10 C9 OLC doub 268 n n C10 C11 OLC sing 269 n n C9 C8 OLC sing 270 n n C17 C16 OLC sing 271 z n C11 C12 OLC sing 272 n n C8 C7 OLC sing 273 n n C24 C22 OLC sing 274 n n C24 O25 OLC sing 275 n n C16 C15 OLC sing 276 n n C12 C13 OLC sing 277 n n C7 C6 OLC sing 278 n n C15 C14 OLC sing 279 n n C13 C14 OLC sing 280 n n C6 C5 OLC sing 281 n n C5 C4 OLC sing 282 n n C4 C3 OLC sing 283 n n C3 C2 OLC sing 284 n n C2 C1 OLC sing 285 n n C21 C22 OLC sing 286 n n C21 O20 OLC sing 287 n n C1 O19 OLC doub 288 n n C1 O20 OLC sing 289 n n C22 O23 OLC sing 290 n n C18 H18 OLC sing 291 n n C18 H18A OLC sing 292 n n C18 H18B OLC sing 293 n n C10 H10 OLC sing 294 n n C9 H9 OLC sing 295 n n C17 H17 OLC sing 296 n n C17 H17A OLC sing 297 n n C11 H11 OLC sing 298 n n C11 H11A OLC sing 299 n n C8 H8 OLC sing 300 n n C8 H8A OLC sing 301 n n C24 H24 OLC sing 302 n n C24 H24A OLC sing 303 n n C16 H16 OLC sing 304 n n C16 H16A OLC sing 305 n n C12 H12 OLC sing 306 n n C12 H12A OLC sing 307 n n C7 H7 OLC sing 308 n n C7 H7A OLC sing 309 n n C15 H15 OLC sing 310 n n C15 H15A OLC sing 311 n n C13 H13 OLC sing 312 n n C13 H13A OLC sing 313 n n C6 H6 OLC sing 314 n n C6 H6A OLC sing 315 n n C14 H14 OLC sing 316 n n C14 H14A OLC sing 317 n n C5 H5 OLC sing 318 n n C5 H5A OLC sing 319 n n C4 H4 OLC sing 320 n n C4 H4A OLC sing 321 n n C3 H3 OLC sing 322 n n C3 H3A OLC sing 323 n n C2 H2 OLC sing 324 n n C2 H2A OLC sing 325 n n C21 H21 OLC sing 326 n n C21 H21A OLC sing 327 n n C22 H22 OLC sing 328 n n O25 HO25 OLC sing 329 n n O23 HO23 OLC sing 330 n n # _atom_sites.entry_id 8AQ2 _atom_sites.fract_transf_matrix[1][1] 0.012811 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008604 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013657 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 OLC A 1 601 601 OLC OLC . C 2 OLC A 1 602 602 OLC OLC . D 2 OLC A 1 603 603 OLC OLC . E 2 OLC A 1 604 604 OLC OLC . F 2 OLC A 1 605 605 OLC OLC . G 2 OLC A 1 606 606 OLC OLC . H 2 OLC A 1 607 607 OLC OLC . I 2 OLC A 1 608 608 OLC OLC . J 2 OLC A 1 609 609 OLC OLC . K 2 OLC A 1 610 610 OLC OLC . L 3 QGT A 1 611 611 QGT QGT . M 3 QGT A 1 612 612 QGT QGT . N 4 FLC A 1 613 613 FLC FLC . O 5 GOL A 1 614 614 GOL GOL . P 5 GOL A 1 615 615 GOL GOL . Q 5 GOL A 1 616 616 GOL GOL . R 5 GOL A 1 617 617 GOL GOL . S 5 GOL A 1 618 618 GOL GOL . T 5 GOL A 1 619 619 GOL GOL . U 5 GOL A 1 620 620 GOL GOL . V 6 HOH A 1 701 701 HOH HOH . V 6 HOH A 2 702 702 HOH HOH . V 6 HOH A 3 703 703 HOH HOH . V 6 HOH A 4 704 704 HOH HOH . V 6 HOH A 5 705 705 HOH HOH . V 6 HOH A 6 706 706 HOH HOH . V 6 HOH A 7 707 707 HOH HOH . V 6 HOH A 8 708 708 HOH HOH . V 6 HOH A 9 709 709 HOH HOH . V 6 HOH A 10 710 710 HOH HOH . V 6 HOH A 11 711 711 HOH HOH . V 6 HOH A 12 712 712 HOH HOH . V 6 HOH A 13 713 713 HOH HOH . V 6 HOH A 14 714 714 HOH HOH . V 6 HOH A 15 715 715 HOH HOH . V 6 HOH A 16 716 716 HOH HOH . V 6 HOH A 17 717 717 HOH HOH . V 6 HOH A 18 718 718 HOH HOH . V 6 HOH A 19 719 719 HOH HOH . V 6 HOH A 20 720 720 HOH HOH . V 6 HOH A 21 721 721 HOH HOH . V 6 HOH A 22 722 722 HOH HOH . V 6 HOH A 23 723 723 HOH HOH . V 6 HOH A 24 724 724 HOH HOH . V 6 HOH A 25 725 725 HOH HOH . V 6 HOH A 26 726 726 HOH HOH . V 6 HOH A 27 727 727 HOH HOH . V 6 HOH A 28 728 728 HOH HOH . V 6 HOH A 29 729 729 HOH HOH . V 6 HOH A 30 730 730 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 OLC . . . G 2 -3.676 1.366 -4.176 1 73.14 ? C10 OLC 606 A 1 HETATM 2 C C9 OLC . . . G 2 -3.302 2.229 -3.202 1 76.24 ? C9 OLC 606 A 1 HETATM 3 C C11 OLC . . . G 2 -4.793 0.369 -3.926 1 69.01 ? C11 OLC 606 A 1 HETATM 4 C C8 OLC . . . G 2 -4.014 2.209 -1.861 1 78.71 ? C8 OLC 606 A 1 HETATM 5 C C24 OLC . . . G 2 -5.157 1.513 10.868 1 88.87 ? C24 OLC 606 A 1 HETATM 6 C C12 OLC . . . G 2 -5.741 0.269 -5.107 1 66.91 ? C12 OLC 606 A 1 HETATM 7 C C7 OLC . . . G 2 -3.219 2.888 -0.759 1 80.65 ? C7 OLC 606 A 1 HETATM 8 C C15 OLC . . . G 2 -9.123 -1.367 -5.528 1 63.93 ? C15 OLC 606 A 1 HETATM 9 C C13 OLC . . . G 2 -6.807 -0.775 -4.822 1 67.37 ? C13 OLC 606 A 1 HETATM 10 C C6 OLC . . . G 2 -4.029 2.831 0.525 1 81.44 ? C6 OLC 606 A 1 HETATM 11 C C14 OLC . . . G 2 -8.182 -0.236 -5.166 1 63.11 ? C14 OLC 606 A 1 HETATM 12 C C5 OLC . . . G 2 -3.205 3.094 1.774 1 82.6 ? C5 OLC 606 A 1 HETATM 13 C C4 OLC . . . G 2 -3.895 2.392 2.933 1 86.23 ? C4 OLC 606 A 1 HETATM 14 C C3 OLC . . . G 2 -3.255 2.677 4.281 1 90.09 ? C3 OLC 606 A 1 HETATM 15 C C2 OLC . . . G 2 -3.903 1.824 5.359 1 92.57 ? C2 OLC 606 A 1 HETATM 16 C C21 OLC . . . G 2 -4.712 2.92 8.894 1 82.6 ? C21 OLC 606 A 1 HETATM 17 C C1 OLC . . . G 2 -3.99 2.599 6.661 1 92.49 ? C1 OLC 606 A 1 HETATM 18 C C22 OLC . . . G 2 -5.776 2.459 9.865 1 82.01 ? C22 OLC 606 A 1 HETATM 19 O O19 OLC . . . G 2 -3.336 3.612 6.799 1 95.63 ? O19 OLC 606 A 1 HETATM 20 O O25 OLC . . . G 2 -6.052 1.31 11.938 1 92.9 ? O25 OLC 606 A 1 HETATM 21 O O23 OLC . . . G 2 -6.336 3.569 10.527 1 79.45 ? O23 OLC 606 A 1 HETATM 22 O O20 OLC . . . G 2 -4.821 2.162 7.709 1 89.07 ? O20 OLC 606 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 19 _model_server_stats.element_count 22 #