data_8AQ3 # _model_server_result.job_id JIUpXjD2rgFQazzolg8Wqw _model_server_result.datetime_utc '2024-11-27 02:59:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8aq3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":615}' # _entry.id 8AQ3 # _exptl.entry_id 8AQ3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8AQ3 _cell.length_a 160.994 _cell.length_b 160.994 _cell.length_c 91.282 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8AQ3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 K N N ? 7 L N N ? 7 O N N ? 7 P N N ? 7 Q N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 259 n n C1 C2 GOL sing 260 n n C1 H11 GOL sing 261 n n C1 H12 GOL sing 262 n n O1 HO1 GOL sing 263 n n C2 O2 GOL sing 264 n n C2 C3 GOL sing 265 n n C2 H2 GOL sing 266 n n O2 HO2 GOL sing 267 n n C3 O3 GOL sing 268 n n C3 H31 GOL sing 269 n n C3 H32 GOL sing 270 n n O3 HO3 GOL sing 271 n n # _atom_sites.entry_id 8AQ3 _atom_sites.fract_transf_matrix[1][1] 0.006211 _atom_sites.fract_transf_matrix[1][2] 0.003586 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007172 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010955 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 6OU A 1 601 601 6OU 6OU . C 2 6OU A 1 602 602 6OU 6OU . D 3 PG5 A 1 603 603 PG5 PG5 . E 3 PG5 A 1 604 604 PG5 PG5 . F 3 PG5 A 1 605 605 PG5 PG5 . G 3 PG5 A 1 606 606 PG5 PG5 . H 4 PG6 A 1 607 607 PG6 PG6 . I 5 TRS A 1 608 608 TRS TRS . J 6 ACT A 1 609 609 ACT ACT . K 7 GOL A 1 610 610 GOL GOL . L 7 GOL A 1 611 611 GOL GOL . M 8 LMT A 1 612 612 LMT LMT . N 8 LMT A 1 613 613 LMT LMT . O 7 GOL A 1 614 614 GOL GOL . P 7 GOL A 1 615 615 GOL GOL . Q 7 GOL A 1 616 616 GOL GOL . R 8 LMT A 1 617 617 LMT LMT . S 8 LMT A 1 618 618 LMT LMT . T 8 LMT A 1 619 619 LMT LMT . U 2 6OU A 1 620 620 6OU 6OU . V 9 CL A 1 621 621 CL CL . W 9 CL A 1 622 622 CL CL . X 9 CL A 1 623 623 CL CL . Y 10 HOH A 1 701 701 HOH HOH . Y 10 HOH A 2 702 702 HOH HOH . Y 10 HOH A 3 703 703 HOH HOH . Y 10 HOH A 4 704 704 HOH HOH . Y 10 HOH A 5 705 705 HOH HOH . Y 10 HOH A 6 706 706 HOH HOH . Y 10 HOH A 7 707 707 HOH HOH . Y 10 HOH A 8 708 708 HOH HOH . Y 10 HOH A 9 709 709 HOH HOH . Y 10 HOH A 10 710 710 HOH HOH . Y 10 HOH A 11 711 711 HOH HOH . Y 10 HOH A 12 712 712 HOH HOH . Y 10 HOH A 13 713 713 HOH HOH . Y 10 HOH A 14 714 714 HOH HOH . Y 10 HOH A 15 715 715 HOH HOH . Y 10 HOH A 16 716 716 HOH HOH . Y 10 HOH A 17 717 717 HOH HOH . Y 10 HOH A 18 718 718 HOH HOH . Y 10 HOH A 19 719 719 HOH HOH . Y 10 HOH A 20 720 720 HOH HOH . Y 10 HOH A 21 721 721 HOH HOH . Y 10 HOH A 22 722 722 HOH HOH . Y 10 HOH A 23 723 723 HOH HOH . Y 10 HOH A 24 724 724 HOH HOH . Y 10 HOH A 25 725 725 HOH HOH . Y 10 HOH A 26 726 726 HOH HOH . Y 10 HOH A 27 727 727 HOH HOH . Y 10 HOH A 28 728 728 HOH HOH . Y 10 HOH A 29 729 729 HOH HOH . Y 10 HOH A 30 730 730 HOH HOH . Y 10 HOH A 31 731 731 HOH HOH . Y 10 HOH A 32 732 732 HOH HOH . Y 10 HOH A 33 733 733 HOH HOH . Y 10 HOH A 34 734 734 HOH HOH . Y 10 HOH A 35 735 735 HOH HOH . Y 10 HOH A 36 736 736 HOH HOH . Y 10 HOH A 37 737 737 HOH HOH . Y 10 HOH A 38 738 738 HOH HOH . Y 10 HOH A 39 739 739 HOH HOH . Y 10 HOH A 40 740 740 HOH HOH . Y 10 HOH A 41 741 741 HOH HOH . Y 10 HOH A 42 742 742 HOH HOH . Y 10 HOH A 43 743 743 HOH HOH . Y 10 HOH A 44 744 744 HOH HOH . Y 10 HOH A 45 745 745 HOH HOH . Y 10 HOH A 46 746 746 HOH HOH . Y 10 HOH A 47 747 747 HOH HOH . Y 10 HOH A 48 748 748 HOH HOH . Y 10 HOH A 49 749 749 HOH HOH . Y 10 HOH A 50 750 750 HOH HOH . Y 10 HOH A 51 751 751 HOH HOH . Y 10 HOH A 52 752 752 HOH HOH . Y 10 HOH A 53 753 753 HOH HOH . Y 10 HOH A 54 754 754 HOH HOH . Y 10 HOH A 55 755 755 HOH HOH . Y 10 HOH A 56 756 756 HOH HOH . Y 10 HOH A 57 757 757 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . P 7 -75.889 74.602 -7.682 1 120.74 ? C1 GOL 615 A 1 HETATM 2 O O1 GOL . . . P 7 -76.697 74.592 -6.509 1 124.84 ? O1 GOL 615 A 1 HETATM 3 C C2 GOL . . . P 7 -75.063 75.864 -7.769 1 121.37 ? C2 GOL 615 A 1 HETATM 4 O O2 GOL . . . P 7 -75.86 76.922 -8.295 1 126.5 ? O2 GOL 615 A 1 HETATM 5 C C3 GOL . . . P 7 -73.796 75.709 -8.58 1 118.07 ? C3 GOL 615 A 1 HETATM 6 O O3 GOL . . . P 7 -72.976 76.87 -8.479 1 115.35 ? O3 GOL 615 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 264 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 6 #