data_8AQ4 # _model_server_result.job_id lyIAuNxokB7asTwwkI3nwQ _model_server_result.datetime_utc '2024-11-26 04:26:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8aq4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":613}' # _entry.id 8AQ4 # _exptl.entry_id 8AQ4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8AQ4 _cell.length_a 160.111 _cell.length_b 160.111 _cell.length_c 90.934 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8AQ4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id N _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 407 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 387 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id H _struct_conn.ptnr2_label_atom_id C01 _struct_conn.ptnr2_label_comp_id QGT _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id QGT _struct_conn.ptnr2_auth_seq_id 607 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.806 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 675 n n C C2 TRS sing 676 n n C C3 TRS sing 677 n n C N TRS sing 678 n n C1 O1 TRS sing 679 n n C1 H11 TRS sing 680 n n C1 H12 TRS sing 681 n n C2 O2 TRS sing 682 n n C2 H21 TRS sing 683 n n C2 H22 TRS sing 684 n n C3 O3 TRS sing 685 n n C3 H31 TRS sing 686 n n C3 H32 TRS sing 687 n n N HN1 TRS sing 688 n n N HN2 TRS sing 689 n n N HN3 TRS sing 690 n n O1 HO1 TRS sing 691 n n O2 HO2 TRS sing 692 n n O3 HO3 TRS sing 693 n n # _atom_sites.entry_id 8AQ4 _atom_sites.fract_transf_matrix[1][1] 0.006246 _atom_sites.fract_transf_matrix[1][2] 0.003606 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007212 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010997 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PG5 A 1 601 601 PG5 PG5 . C 3 GOL A 1 602 701 GOL GOL . D 3 GOL A 1 603 801 GOL GOL . E 2 PG5 A 1 604 901 PG5 PG5 . F 3 GOL A 1 605 1001 GOL GOL . G 4 6OU A 1 606 1101 6OU 6OU . H 5 QGT A 1 607 1 QGT QGT . I 4 6OU A 1 608 2 6OU 6OU . J 4 6OU A 1 609 3 6OU 6OU . K 2 PG5 A 1 610 5 PG5 PG5 . L 2 PG5 A 1 611 7 PG5 PG5 . M 6 PG6 A 1 612 8 PG6 PG6 . N 7 TRS A 1 613 9 TRS TRS . O 8 ACT A 1 614 10 ACT ACT . P 3 GOL A 1 615 11 GOL GOL . Q 3 GOL A 1 616 12 GOL GOL . R 3 GOL A 1 617 13 GOL GOL . S 9 LMT A 1 618 14 LMT LMT . T 9 LMT A 1 619 15 LMT LMT . U 9 LMT A 1 620 16 LMT LMT . V 10 CL A 1 621 17 CL CL . W 10 CL A 1 622 18 CL CL . X 11 HOH A 1 701 15 HOH HOH . X 11 HOH A 2 702 22 HOH HOH . X 11 HOH A 3 703 23 HOH HOH . X 11 HOH A 4 704 10 HOH HOH . X 11 HOH A 5 705 14 HOH HOH . X 11 HOH A 6 706 7 HOH HOH . X 11 HOH A 7 707 3 HOH HOH . X 11 HOH A 8 708 8 HOH HOH . X 11 HOH A 9 709 19 HOH HOH . X 11 HOH A 10 710 24 HOH HOH . X 11 HOH A 11 711 18 HOH HOH . X 11 HOH A 12 712 11 HOH HOH . X 11 HOH A 13 713 12 HOH HOH . X 11 HOH A 14 714 16 HOH HOH . X 11 HOH A 15 715 2 HOH HOH . X 11 HOH A 16 716 9 HOH HOH . X 11 HOH A 17 717 13 HOH HOH . X 11 HOH A 18 718 4 HOH HOH . X 11 HOH A 19 719 21 HOH HOH . X 11 HOH A 20 720 5 HOH HOH . X 11 HOH A 21 721 17 HOH HOH . X 11 HOH A 22 722 20 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . N 7 81.413 -33.403 15.751 1 97.62 ? C TRS 613 A 1 HETATM 2 C C1 TRS . . . N 7 81.801 -34.867 15.657 1 98.29 ? C1 TRS 613 A 1 HETATM 3 C C2 TRS . . . N 7 81.692 -32.68 14.42 1 102.42 ? C2 TRS 613 A 1 HETATM 4 C C3 TRS . . . N 7 79.932 -33.314 16.128 1 67.9 ? C3 TRS 613 A 1 HETATM 5 N N TRS . . . N 7 82.222 -32.847 16.82 1 107.03 ? N TRS 613 A 1 HETATM 6 O O1 TRS . . . N 7 83.059 -34.907 15.05 1 98.79 ? O1 TRS 613 A 1 HETATM 7 O O2 TRS . . . N 7 82.61 -33.359 13.597 1 97.21 ? O2 TRS 613 A 1 HETATM 8 O O3 TRS . . . N 7 79.249 -32.49 15.224 1 72.21 ? O3 TRS 613 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #