data_8AQ4 # _model_server_result.job_id p3oNIarJR3Fl0cCRVMvvsA _model_server_result.datetime_utc '2024-11-08 13:29:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8aq4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"S","auth_seq_id":618}' # _entry.id 8AQ4 # _exptl.entry_id 8AQ4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 510.615 _entity.id 9 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECYL-BETA-D-MALTOSIDE _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8AQ4 _cell.length_a 160.111 _cell.length_b 160.111 _cell.length_c 90.934 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8AQ4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 9 S N N ? 9 T N N ? 9 U N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 407 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 387 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id H _struct_conn.ptnr2_label_atom_id C01 _struct_conn.ptnr2_label_comp_id QGT _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id QGT _struct_conn.ptnr2_auth_seq_id 607 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.806 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C24 H46 O11' _chem_comp.formula_weight 510.615 _chem_comp.id LMT _chem_comp.mon_nstd_flag . _chem_comp.name DODECYL-BETA-D-MALTOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1B C2B LMT sing 337 n n C1B O1B LMT sing 338 n n C1B O5B LMT sing 339 n n C1B H1B LMT sing 340 n n C2B C3B LMT sing 341 n n C2B O2B LMT sing 342 n n C2B H2B LMT sing 343 n n C3B C4B LMT sing 344 n n C3B O3B LMT sing 345 n n C3B H3B LMT sing 346 n n C4B C5B LMT sing 347 n n C4B O4' LMT sing 348 n n C4B H4B LMT sing 349 n n C5B C6B LMT sing 350 n n C5B O5B LMT sing 351 n n C5B H5B LMT sing 352 n n C6B O6B LMT sing 353 n n C6B "H6'2" LMT sing 354 n n C6B "H6'1" LMT sing 355 n n O1B C4' LMT sing 356 n n O2B H2O1 LMT sing 357 n n O3B H3O1 LMT sing 358 n n O4' H4O1 LMT sing 359 n n O6B H6B LMT sing 360 n n C1' C2' LMT sing 361 n n C1' O1' LMT sing 362 n n C1' O5' LMT sing 363 n n C1' H1' LMT sing 364 n n C2' C3' LMT sing 365 n n C2' O2' LMT sing 366 n n C2' H2' LMT sing 367 n n C3' C4' LMT sing 368 n n C3' O3' LMT sing 369 n n C3' H3' LMT sing 370 n n C4' C5' LMT sing 371 n n C4' H4' LMT sing 372 n n C5' C6' LMT sing 373 n n C5' O5' LMT sing 374 n n C5' H5' LMT sing 375 n n C6' O6' LMT sing 376 n n C6' H6D LMT sing 377 n n C6' H6E LMT sing 378 n n O1' C1 LMT sing 379 n n O2' H2O2 LMT sing 380 n n O3' H3O2 LMT sing 381 n n O6' H6' LMT sing 382 n n C1 C2 LMT sing 383 n n C1 H12 LMT sing 384 n n C1 H11 LMT sing 385 n n C2 C3 LMT sing 386 n n C2 H22 LMT sing 387 n n C2 H21 LMT sing 388 n n C3 C4 LMT sing 389 n n C3 H32 LMT sing 390 n n C3 H31 LMT sing 391 n n C4 C5 LMT sing 392 n n C4 H42 LMT sing 393 n n C4 H41 LMT sing 394 n n C5 C6 LMT sing 395 n n C5 H52 LMT sing 396 n n C5 H51 LMT sing 397 n n C6 C7 LMT sing 398 n n C6 H62 LMT sing 399 n n C6 H61 LMT sing 400 n n C7 C8 LMT sing 401 n n C7 H72 LMT sing 402 n n C7 H71 LMT sing 403 n n C8 C9 LMT sing 404 n n C8 H82 LMT sing 405 n n C8 H81 LMT sing 406 n n C9 C10 LMT sing 407 n n C9 H92 LMT sing 408 n n C9 H91 LMT sing 409 n n C10 C11 LMT sing 410 n n C10 H102 LMT sing 411 n n C10 H101 LMT sing 412 n n C11 C12 LMT sing 413 n n C11 H112 LMT sing 414 n n C11 H111 LMT sing 415 n n C12 H123 LMT sing 416 n n C12 H122 LMT sing 417 n n C12 H121 LMT sing 418 n n # _atom_sites.entry_id 8AQ4 _atom_sites.fract_transf_matrix[1][1] 0.006246 _atom_sites.fract_transf_matrix[1][2] 0.003606 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007212 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010997 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PG5 A 1 601 601 PG5 PG5 . C 3 GOL A 1 602 701 GOL GOL . D 3 GOL A 1 603 801 GOL GOL . E 2 PG5 A 1 604 901 PG5 PG5 . F 3 GOL A 1 605 1001 GOL GOL . G 4 6OU A 1 606 1101 6OU 6OU . H 5 QGT A 1 607 1 QGT QGT . I 4 6OU A 1 608 2 6OU 6OU . J 4 6OU A 1 609 3 6OU 6OU . K 2 PG5 A 1 610 5 PG5 PG5 . L 2 PG5 A 1 611 7 PG5 PG5 . M 6 PG6 A 1 612 8 PG6 PG6 . N 7 TRS A 1 613 9 TRS TRS . O 8 ACT A 1 614 10 ACT ACT . P 3 GOL A 1 615 11 GOL GOL . Q 3 GOL A 1 616 12 GOL GOL . R 3 GOL A 1 617 13 GOL GOL . S 9 LMT A 1 618 14 LMT LMT . T 9 LMT A 1 619 15 LMT LMT . U 9 LMT A 1 620 16 LMT LMT . V 10 CL A 1 621 17 CL CL . W 10 CL A 1 622 18 CL CL . X 11 HOH A 1 701 15 HOH HOH . X 11 HOH A 2 702 22 HOH HOH . X 11 HOH A 3 703 23 HOH HOH . X 11 HOH A 4 704 10 HOH HOH . X 11 HOH A 5 705 14 HOH HOH . X 11 HOH A 6 706 7 HOH HOH . X 11 HOH A 7 707 3 HOH HOH . X 11 HOH A 8 708 8 HOH HOH . X 11 HOH A 9 709 19 HOH HOH . X 11 HOH A 10 710 24 HOH HOH . X 11 HOH A 11 711 18 HOH HOH . X 11 HOH A 12 712 11 HOH HOH . X 11 HOH A 13 713 12 HOH HOH . X 11 HOH A 14 714 16 HOH HOH . X 11 HOH A 15 715 2 HOH HOH . X 11 HOH A 16 716 9 HOH HOH . X 11 HOH A 17 717 13 HOH HOH . X 11 HOH A 18 718 4 HOH HOH . X 11 HOH A 19 719 21 HOH HOH . X 11 HOH A 20 720 5 HOH HOH . X 11 HOH A 21 721 17 HOH HOH . X 11 HOH A 22 722 20 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 LMT . . . S 9 59.277 -75.027 26.977 1 43.75 ? C1 LMT 618 A 1 HETATM 2 C C2 LMT . . . S 9 58.124 -75.906 26.572 1 66.82 ? C2 LMT 618 A 1 HETATM 3 C C3 LMT . . . S 9 58.196 -77.371 26.93 1 77.83 ? C3 LMT 618 A 1 HETATM 4 C C4 LMT . . . S 9 57.112 -78.074 26.123 1 77.77 ? C4 LMT 618 A 1 HETATM 5 C C5 LMT . . . S 9 56.967 -79.561 26.338 1 60.89 ? C5 LMT 618 A 1 HETATM 6 C C6 LMT . . . S 9 56.245 -80.207 25.167 1 65.21 ? C6 LMT 618 A 1 HETATM 7 C C7 LMT . . . S 9 54.828 -80.661 25.485 1 67.66 ? C7 LMT 618 A 1 HETATM 8 C C8 LMT . . . S 9 53.839 -80.058 24.511 1 70.28 ? C8 LMT 618 A 1 HETATM 9 C C9 LMT . . . S 9 53.499 -80.858 23.271 1 75.02 ? C9 LMT 618 A 1 HETATM 10 C C10 LMT . . . S 9 52.166 -80.367 22.729 1 82.34 ? C10 LMT 618 A 1 HETATM 11 C C11 LMT . . . S 9 51.235 -79.972 23.84 1 78.76 ? C11 LMT 618 A 1 HETATM 12 C C12 LMT . . . S 9 49.795 -79.922 23.438 1 59.25 ? C12 LMT 618 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 332 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 12 #