data_8AQ5 # _model_server_result.job_id H6vsxH9gwC0RjIIbQggsWg _model_server_result.datetime_utc '2024-11-14 19:32:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8aq5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1001}' # _entry.id 8AQ5 # _exptl.entry_id 8AQ5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.95 _cell.angle_gamma 90 _cell.entry_id 8AQ5 _cell.length_a 46.105 _cell.length_b 40.324 _cell.length_c 52.292 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8AQ5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 13 A CYS 12 1_555 C C34 NZ6 . A NZ6 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.814 ? metalc ? metalc1 A OG SER 18 A SER 17 1_555 B MG MG . A MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.189 ? metalc ? metalc2 B MG MG . A MG 1001 1_555 D O3B GDP . A GDP 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? metalc ? metalc3 B MG MG . A MG 1001 1_555 E O HOH . A HOH 1122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? metalc ? metalc4 B MG MG . A MG 1001 1_555 E O HOH . A HOH 1126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? metalc ? metalc5 B MG MG . A MG 1001 1_555 E O HOH . A HOH 1160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? metalc ? metalc6 B MG MG . A MG 1001 1_555 E O HOH . A HOH 1184 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8AQ5 _atom_sites.fract_transf_matrix[1][1] 0.02169 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004196 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024799 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019478 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 1001 1001 MG MG . C 3 NZ6 A 1 1002 1 NZ6 LI1 . D 4 GDP A 1 1003 2 GDP GDP . E 5 HOH A 1 1101 141 HOH HOH . E 5 HOH A 2 1102 80 HOH HOH . E 5 HOH A 3 1103 30 HOH HOH . E 5 HOH A 4 1104 122 HOH HOH . E 5 HOH A 5 1105 97 HOH HOH . E 5 HOH A 6 1106 35 HOH HOH . E 5 HOH A 7 1107 37 HOH HOH . E 5 HOH A 8 1108 8 HOH HOH . E 5 HOH A 9 1109 53 HOH HOH . E 5 HOH A 10 1110 170 HOH HOH . E 5 HOH A 11 1111 86 HOH HOH . E 5 HOH A 12 1112 63 HOH HOH . E 5 HOH A 13 1113 29 HOH HOH . E 5 HOH A 14 1114 92 HOH HOH . E 5 HOH A 15 1115 16 HOH HOH . E 5 HOH A 16 1116 94 HOH HOH . E 5 HOH A 17 1117 110 HOH HOH . E 5 HOH A 18 1118 61 HOH HOH . E 5 HOH A 19 1119 153 HOH HOH . E 5 HOH A 20 1120 120 HOH HOH . E 5 HOH A 21 1121 51 HOH HOH . E 5 HOH A 22 1122 1 HOH HOH . E 5 HOH A 23 1123 67 HOH HOH . E 5 HOH A 24 1124 7 HOH HOH . E 5 HOH A 25 1125 188 HOH HOH . E 5 HOH A 26 1126 3 HOH HOH . E 5 HOH A 27 1127 45 HOH HOH . E 5 HOH A 28 1128 18 HOH HOH . E 5 HOH A 29 1129 54 HOH HOH . E 5 HOH A 30 1130 17 HOH HOH . E 5 HOH A 31 1131 41 HOH HOH . E 5 HOH A 32 1132 50 HOH HOH . E 5 HOH A 33 1133 28 HOH HOH . E 5 HOH A 34 1134 46 HOH HOH . E 5 HOH A 35 1135 20 HOH HOH . E 5 HOH A 36 1136 31 HOH HOH . E 5 HOH A 37 1137 175 HOH HOH . E 5 HOH A 38 1138 127 HOH HOH . E 5 HOH A 39 1139 100 HOH HOH . E 5 HOH A 40 1140 9 HOH HOH . E 5 HOH A 41 1141 65 HOH HOH . E 5 HOH A 42 1142 39 HOH HOH . E 5 HOH A 43 1143 107 HOH HOH . E 5 HOH A 44 1144 95 HOH HOH . E 5 HOH A 45 1145 123 HOH HOH . E 5 HOH A 46 1146 27 HOH HOH . E 5 HOH A 47 1147 98 HOH HOH . E 5 HOH A 48 1148 48 HOH HOH . E 5 HOH A 49 1149 36 HOH HOH . E 5 HOH A 50 1150 90 HOH HOH . E 5 HOH A 51 1151 71 HOH HOH . E 5 HOH A 52 1152 14 HOH HOH . E 5 HOH A 53 1153 21 HOH HOH . E 5 HOH A 54 1154 82 HOH HOH . E 5 HOH A 55 1155 5 HOH HOH . E 5 HOH A 56 1156 24 HOH HOH . E 5 HOH A 57 1157 181 HOH HOH . E 5 HOH A 58 1158 23 HOH HOH . E 5 HOH A 59 1159 62 HOH HOH . E 5 HOH A 60 1160 4 HOH HOH . E 5 HOH A 61 1161 88 HOH HOH . E 5 HOH A 62 1162 172 HOH HOH . E 5 HOH A 63 1163 72 HOH HOH . E 5 HOH A 64 1164 34 HOH HOH . E 5 HOH A 65 1165 70 HOH HOH . E 5 HOH A 66 1166 77 HOH HOH . E 5 HOH A 67 1167 52 HOH HOH . E 5 HOH A 68 1168 59 HOH HOH . E 5 HOH A 69 1169 75 HOH HOH . E 5 HOH A 70 1170 140 HOH HOH . E 5 HOH A 71 1171 40 HOH HOH . E 5 HOH A 72 1172 10 HOH HOH . E 5 HOH A 73 1173 55 HOH HOH . E 5 HOH A 74 1174 115 HOH HOH . E 5 HOH A 75 1175 11 HOH HOH . E 5 HOH A 76 1176 126 HOH HOH . E 5 HOH A 77 1177 174 HOH HOH . E 5 HOH A 78 1178 128 HOH HOH . E 5 HOH A 79 1179 113 HOH HOH . E 5 HOH A 80 1180 76 HOH HOH . E 5 HOH A 81 1181 112 HOH HOH . E 5 HOH A 82 1182 68 HOH HOH . E 5 HOH A 83 1183 12 HOH HOH . E 5 HOH A 84 1184 2 HOH HOH . E 5 HOH A 85 1185 43 HOH HOH . E 5 HOH A 86 1186 25 HOH HOH . E 5 HOH A 87 1187 124 HOH HOH . E 5 HOH A 88 1188 104 HOH HOH . E 5 HOH A 89 1189 117 HOH HOH . E 5 HOH A 90 1190 6 HOH HOH . E 5 HOH A 91 1191 15 HOH HOH . E 5 HOH A 92 1192 135 HOH HOH . E 5 HOH A 93 1193 47 HOH HOH . E 5 HOH A 94 1194 184 HOH HOH . E 5 HOH A 95 1195 167 HOH HOH . E 5 HOH A 96 1196 73 HOH HOH . E 5 HOH A 97 1197 130 HOH HOH . E 5 HOH A 98 1198 165 HOH HOH . E 5 HOH A 99 1199 155 HOH HOH . E 5 HOH A 100 1200 33 HOH HOH . E 5 HOH A 101 1201 169 HOH HOH . E 5 HOH A 102 1202 57 HOH HOH . E 5 HOH A 103 1203 64 HOH HOH . E 5 HOH A 104 1204 74 HOH HOH . E 5 HOH A 105 1205 58 HOH HOH . E 5 HOH A 106 1206 66 HOH HOH . E 5 HOH A 107 1207 171 HOH HOH . E 5 HOH A 108 1208 69 HOH HOH . E 5 HOH A 109 1209 44 HOH HOH . E 5 HOH A 110 1210 147 HOH HOH . E 5 HOH A 111 1211 32 HOH HOH . E 5 HOH A 112 1212 81 HOH HOH . E 5 HOH A 113 1213 109 HOH HOH . E 5 HOH A 114 1214 96 HOH HOH . E 5 HOH A 115 1215 89 HOH HOH . E 5 HOH A 116 1216 19 HOH HOH . E 5 HOH A 117 1217 173 HOH HOH . E 5 HOH A 118 1218 26 HOH HOH . E 5 HOH A 119 1219 119 HOH HOH . E 5 HOH A 120 1220 38 HOH HOH . E 5 HOH A 121 1221 93 HOH HOH . E 5 HOH A 122 1222 186 HOH HOH . E 5 HOH A 123 1223 111 HOH HOH . E 5 HOH A 124 1224 42 HOH HOH . E 5 HOH A 125 1225 60 HOH HOH . E 5 HOH A 126 1226 22 HOH HOH . E 5 HOH A 127 1227 114 HOH HOH . E 5 HOH A 128 1228 84 HOH HOH . E 5 HOH A 129 1229 56 HOH HOH . E 5 HOH A 130 1230 183 HOH HOH . E 5 HOH A 131 1231 85 HOH HOH . E 5 HOH A 132 1232 87 HOH HOH . E 5 HOH A 133 1233 49 HOH HOH . E 5 HOH A 134 1234 103 HOH HOH . E 5 HOH A 135 1235 91 HOH HOH . E 5 HOH A 136 1236 108 HOH HOH . E 5 HOH A 137 1237 121 HOH HOH . E 5 HOH A 138 1238 13 HOH HOH . E 5 HOH A 139 1239 176 HOH HOH . E 5 HOH A 140 1240 106 HOH HOH . E 5 HOH A 141 1241 78 HOH HOH . E 5 HOH A 142 1242 83 HOH HOH . E 5 HOH A 143 1243 156 HOH HOH . E 5 HOH A 144 1244 158 HOH HOH . E 5 HOH A 145 1245 102 HOH HOH . E 5 HOH A 146 1246 118 HOH HOH . E 5 HOH A 147 1247 116 HOH HOH . E 5 HOH A 148 1248 178 HOH HOH . E 5 HOH A 149 1249 185 HOH HOH . E 5 HOH A 150 1250 137 HOH HOH . E 5 HOH A 151 1251 129 HOH HOH . E 5 HOH A 152 1252 79 HOH HOH . E 5 HOH A 153 1253 105 HOH HOH . E 5 HOH A 154 1254 133 HOH HOH . E 5 HOH A 155 1255 177 HOH HOH . E 5 HOH A 156 1256 152 HOH HOH . E 5 HOH A 157 1257 168 HOH HOH . E 5 HOH A 158 1258 101 HOH HOH . E 5 HOH A 159 1259 125 HOH HOH . E 5 HOH A 160 1260 99 HOH HOH . E 5 HOH A 161 1261 157 HOH HOH . E 5 HOH A 162 1262 180 HOH HOH . E 5 HOH A 163 1263 142 HOH HOH . E 5 HOH A 164 1264 131 HOH HOH . E 5 HOH A 165 1265 143 HOH HOH . E 5 HOH A 166 1266 154 HOH HOH . E 5 HOH A 167 1267 138 HOH HOH . E 5 HOH A 168 1268 151 HOH HOH . E 5 HOH A 169 1269 136 HOH HOH . E 5 HOH A 170 1270 132 HOH HOH . E 5 HOH A 171 1271 162 HOH HOH . E 5 HOH A 172 1272 187 HOH HOH . E 5 HOH A 173 1273 182 HOH HOH . E 5 HOH A 174 1274 161 HOH HOH . E 5 HOH A 175 1275 159 HOH HOH . E 5 HOH A 176 1276 149 HOH HOH . E 5 HOH A 177 1277 160 HOH HOH . E 5 HOH A 178 1278 163 HOH HOH . E 5 HOH A 179 1279 148 HOH HOH . E 5 HOH A 180 1280 150 HOH HOH . E 5 HOH A 181 1281 166 HOH HOH . E 5 HOH A 182 1282 139 HOH HOH . E 5 HOH A 183 1283 145 HOH HOH . E 5 HOH A 184 1284 146 HOH HOH . E 5 HOH A 185 1285 179 HOH HOH . E 5 HOH A 186 1286 164 HOH HOH . E 5 HOH A 187 1287 134 HOH HOH . E 5 HOH A 188 1288 144 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -1.895 _atom_site.Cartn_y 18.364 _atom_site.Cartn_z 16.761 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 11.31 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 1001 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #