data_8ARI
#
_model_server_result.job_id            wEDugPbUUaD8DST6vIIL1Q 
_model_server_result.datetime_utc      '2024-11-25 23:56:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8ari 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"PA","auth_seq_id":501}' 
#
_entry.id    8ARI 
#
_exptl.entry_id    8ARI 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              663.425 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            NICOTINAMIDE-ADENINE-DINUCLEOTIDE 
_entity.pdbx_number_of_molecules    24 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8ARI 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8ARI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    34-meric 
_pdbx_struct_assembly.oligomeric_count      34 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 IA N N 
? 3 JA N N 
? 3 KA N N 
? 3 LA N N 
? 3 MA N N 
? 3 NA N N 
? 3 OA N N 
? 3 PA N N 
? 3 QA N N 
? 3 RA N N 
? 3 SA N N 
? 3 TA N N 
? 3 UA N N 
? 3 VA N N 
? 3 WA N N 
? 3 XA N N 
? 3 YA N N 
? 3 ZA N N 
? 3 AB N N 
? 3 BB N N 
? 3 CB N N 
? 3 DB N N 
? 3 EB N N 
? 3 FB N N 
#
_chem_comp.formula           'C21 H27 N7 O14 P2' 
_chem_comp.formula_weight    663.425 
_chem_comp.id                NAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              NICOTINAMIDE-ADENINE-DINUCLEOTIDE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NAD doub 235 n n 
PA O2A NAD sing 236 n n 
PA O5B NAD sing 237 n n 
PA O3 NAD sing 238 n n 
O2A HOA2 NAD sing 239 n n 
O5B C5B NAD sing 240 n n 
C5B C4B NAD sing 241 n n 
C5B H51A NAD sing 242 n n 
C5B H52A NAD sing 243 n n 
C4B O4B NAD sing 244 n n 
C4B C3B NAD sing 245 n n 
C4B H4B NAD sing 246 n n 
O4B C1B NAD sing 247 n n 
C3B O3B NAD sing 248 n n 
C3B C2B NAD sing 249 n n 
C3B H3B NAD sing 250 n n 
O3B HO3A NAD sing 251 n n 
C2B O2B NAD sing 252 n n 
C2B C1B NAD sing 253 n n 
C2B H2B NAD sing 254 n n 
O2B HO2A NAD sing 255 n n 
C1B N9A NAD sing 256 n n 
C1B H1B NAD sing 257 n n 
N9A C8A NAD sing 258 n y 
N9A C4A NAD sing 259 n y 
C8A N7A NAD doub 260 n y 
C8A H8A NAD sing 261 n n 
N7A C5A NAD sing 262 n y 
C5A C6A NAD sing 263 n y 
C5A C4A NAD doub 264 n y 
C6A N6A NAD sing 265 n n 
C6A N1A NAD doub 266 n y 
N6A H61A NAD sing 267 n n 
N6A H62A NAD sing 268 n n 
N1A C2A NAD sing 269 n y 
C2A N3A NAD doub 270 n y 
C2A H2A NAD sing 271 n n 
N3A C4A NAD sing 272 n y 
O3 PN NAD sing 273 n n 
PN O1N NAD doub 274 n n 
PN O2N NAD sing 275 n n 
PN O5D NAD sing 276 n n 
O5D C5D NAD sing 277 n n 
C5D C4D NAD sing 278 n n 
C5D H51N NAD sing 279 n n 
C5D H52N NAD sing 280 n n 
C4D O4D NAD sing 281 n n 
C4D C3D NAD sing 282 n n 
C4D H4D NAD sing 283 n n 
O4D C1D NAD sing 284 n n 
C3D O3D NAD sing 285 n n 
C3D C2D NAD sing 286 n n 
C3D H3D NAD sing 287 n n 
O3D HO3N NAD sing 288 n n 
C2D O2D NAD sing 289 n n 
C2D C1D NAD sing 290 n n 
C2D H2D NAD sing 291 n n 
O2D HO2N NAD sing 292 n n 
C1D N1N NAD sing 293 n n 
C1D H1D NAD sing 294 n n 
N1N C2N NAD sing 295 n y 
N1N C6N NAD doub 296 n y 
C2N C3N NAD doub 297 n y 
C2N H2N NAD sing 298 n n 
C3N C7N NAD sing 299 n n 
C3N C4N NAD sing 300 n y 
C7N O7N NAD doub 301 n n 
C7N N7N NAD sing 302 n n 
N7N H71N NAD sing 303 n n 
N7N H72N NAD sing 304 n n 
C4N C5N NAD doub 305 n y 
C4N H4N NAD sing 306 n n 
C5N C6N NAD sing 307 n y 
C5N H5N NAD sing 308 n n 
C6N H6N NAD sing 309 n n 
#
_atom_sites.entry_id                     8ARI 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
IA 3 NAD A 1 501 401 NAD NAD . 
JA 3 NAD B 1 501 401 NAD NAD . 
KA 3 NAD C 1 501 401 NAD NAD . 
LA 3 NAD D 1 501 401 NAD NAD . 
MA 3 NAD E 1 501 401 NAD NAD . 
NA 3 NAD F 1 501 401 NAD NAD . 
OA 3 NAD G 1 501 401 NAD NAD . 
PA 3 NAD H 1 501 401 NAD NAD . 
QA 3 NAD I 1 501 401 NAD NAD . 
RA 3 NAD J 1 501 401 NAD NAD . 
SA 3 NAD K 1 501 401 NAD NAD . 
TA 3 NAD L 1 501 401 NAD NAD . 
UA 3 NAD M 1 501 401 NAD NAD . 
VA 3 NAD N 1 501 401 NAD NAD . 
WA 3 NAD O 1 501 401 NAD NAD . 
XA 3 NAD P 1 501 401 NAD NAD . 
YA 3 NAD Q 1 501 401 NAD NAD . 
ZA 3 NAD R 1 501 401 NAD NAD . 
AB 3 NAD S 1 501 401 NAD NAD . 
BB 3 NAD T 1 501 401 NAD NAD . 
CB 3 NAD U 1 501 401 NAD NAD . 
DB 3 NAD V 1 501 401 NAD NAD . 
EB 3 NAD W 1 501 401 NAD NAD . 
FB 3 NAD X 1 501 401 NAD NAD . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NAD . . . PA 3 236.541 150.933 247.897 1 31.09 ? PA NAD 501 H 1 
HETATM 2 O O1A NAD . . . PA 3 236.842 150.996 249.357 1 31.09 ? O1A NAD 501 H 1 
HETATM 3 O O2A NAD . . . PA 3 235.54 151.89 247.341 1 31.09 ? O2A NAD 501 H 1 
HETATM 4 O O5B NAD . . . PA 3 236.106 149.433 247.528 1 31.09 ? O5B NAD 501 H 1 
HETATM 5 C C5B NAD . . . PA 3 236.962 148.328 247.924 1 31.09 ? C5B NAD 501 H 1 
HETATM 6 C C4B NAD . . . PA 3 236.203 147.033 247.757 1 31.09 ? C4B NAD 501 H 1 
HETATM 7 O O4B NAD . . . PA 3 237.054 145.913 248.118 1 31.09 ? O4B NAD 501 H 1 
HETATM 8 C C3B NAD . . . PA 3 234.932 146.872 248.609 1 31.09 ? C3B NAD 501 H 1 
HETATM 9 O O3B NAD . . . PA 3 233.87 146.396 247.794 1 31.09 ? O3B NAD 501 H 1 
HETATM 10 C C2B NAD . . . PA 3 235.33 145.784 249.612 1 31.09 ? C2B NAD 501 H 1 
HETATM 11 O O2B NAD . . . PA 3 234.236 145.076 250.154 1 31.09 ? O2B NAD 501 H 1 
HETATM 12 C C1B NAD . . . PA 3 236.237 144.944 248.726 1 31.09 ? C1B NAD 501 H 1 
HETATM 13 N N9A NAD . . . PA 3 237.067 143.988 249.449 1 31.09 ? N9A NAD 501 H 1 
HETATM 14 C C8A NAD . . . PA 3 237.684 144.182 250.659 1 31.09 ? C8A NAD 501 H 1 
HETATM 15 N N7A NAD . . . PA 3 238.359 143.14 251.072 1 31.09 ? N7A NAD 501 H 1 
HETATM 16 C C5A NAD . . . PA 3 238.167 142.19 250.08 1 31.09 ? C5A NAD 501 H 1 
HETATM 17 C C6A NAD . . . PA 3 238.624 140.867 249.935 1 31.09 ? C6A NAD 501 H 1 
HETATM 18 N N6A NAD . . . PA 3 239.394 140.249 250.825 1 31.09 ? N6A NAD 501 H 1 
HETATM 19 N N1A NAD . . . PA 3 238.246 140.193 248.823 1 31.09 ? N1A NAD 501 H 1 
HETATM 20 C C2A NAD . . . PA 3 237.47 140.819 247.931 1 31.09 ? C2A NAD 501 H 1 
HETATM 21 N N3A NAD . . . PA 3 236.984 142.056 247.961 1 31.09 ? N3A NAD 501 H 1 
HETATM 22 C C4A NAD . . . PA 3 237.37 142.7 249.074 1 31.09 ? C4A NAD 501 H 1 
HETATM 23 O O3 NAD . . . PA 3 237.915 151.085 247.083 1 31.09 ? O3 NAD 501 H 1 
HETATM 24 P PN NAD . . . PA 3 238.316 151.663 245.639 1 31.09 ? PN NAD 501 H 1 
HETATM 25 O O1N NAD . . . PA 3 238.105 153.14 245.628 1 31.09 ? O1N NAD 501 H 1 
HETATM 26 O O2N NAD . . . PA 3 237.644 150.849 244.584 1 31.09 ? O2N NAD 501 H 1 
HETATM 27 O O5D NAD . . . PA 3 239.887 151.35 245.622 1 31.09 ? O5D NAD 501 H 1 
HETATM 28 C C5D NAD . . . PA 3 240.308 149.969 245.514 1 31.09 ? C5D NAD 501 H 1 
HETATM 29 C C4D NAD . . . PA 3 241.802 149.892 245.708 1 31.09 ? C4D NAD 501 H 1 
HETATM 30 O O4D NAD . . . PA 3 242.448 150.727 244.722 1 31.09 ? O4D NAD 501 H 1 
HETATM 31 C C3D NAD . . . PA 3 242.332 150.378 247.065 1 31.09 ? C3D NAD 501 H 1 
HETATM 32 O O3D NAD . . . PA 3 243.25 149.426 247.587 1 31.09 ? O3D NAD 501 H 1 
HETATM 33 C C2D NAD . . . PA 3 243.055 151.67 246.673 1 31.09 ? C2D NAD 501 H 1 
HETATM 34 O O2D NAD . . . PA 3 244.066 152.069 247.584 1 31.09 ? O2D NAD 501 H 1 
HETATM 35 C C1D NAD . . . PA 3 243.605 151.302 245.303 1 31.09 ? C1D NAD 501 H 1 
HETATM 36 N N1N NAD . . . PA 3 243.99 152.501 244.505 1 31.09 ? N1N NAD 501 H 1 
HETATM 37 C C2N NAD . . . PA 3 245.177 152.516 243.815 1 31.09 ? C2N NAD 501 H 1 
HETATM 38 C C3N NAD . . . PA 3 245.55 153.636 243.086 1 31.09 ? C3N NAD 501 H 1 
HETATM 39 C C7N NAD . . . PA 3 246.868 153.614 242.354 1 31.09 ? C7N NAD 501 H 1 
HETATM 40 O O7N NAD . . . PA 3 247.54 152.585 242.35 1 31.09 ? O7N NAD 501 H 1 
HETATM 41 N N7N NAD . . . PA 3 247.248 154.724 241.739 1 31.09 ? N7N NAD 501 H 1 
HETATM 42 C C4N NAD . . . PA 3 244.696 154.731 243.044 1 31.09 ? C4N NAD 501 H 1 
HETATM 43 C C5N NAD . . . PA 3 243.499 154.692 243.723 1 31.09 ? C5N NAD 501 H 1 
HETATM 44 C C6N NAD . . . PA 3 243.169 153.572 244.451 1 31.09 ? C6N NAD 501 H 1 
#
_model_server_stats.io_time_ms              59 
_model_server_stats.parse_time_ms           22 
_model_server_stats.create_model_time_ms    49 
_model_server_stats.query_time_ms           266 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           44 
#