data_8ASI # _model_server_result.job_id Rx4ty2TnN3RqNjU_1GJYHA _model_server_result.datetime_utc '2025-03-06 09:20:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8asi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"CA","auth_seq_id":301}' # _entry.id 8ASI # _exptl.entry_id 8ASI _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 618.503 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEME C' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8ASI _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8ASI _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 8 S N N ? 8 CA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 134 A CYS 134 1_555 A SG CYS 151 A CYS 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf2 E SG CYS 134 E CYS 134 1_555 E SG CYS 151 E CYS 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? covale ? covale1 C SG CYS 58 C CYS 58 1_555 S C3B HEC . C HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.739 ? covale ? covale2 C SG CYS 61 C CYS 61 1_555 S CAC HEC . C HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.836 ? covale ? covale3 G SG CYS 58 G CYS 58 1_555 CA CAB HEC . G HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.782 ? metalc ? metalc1 A SG CYS 129 A CYS 129 1_555 I FE1 FES . A FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.274 ? metalc ? metalc2 A ND1 HIS 131 A HIS 131 1_555 I FE2 FES . A FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? metalc ? metalc3 A SG CYS 149 A CYS 149 1_555 I FE1 FES . A FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? metalc ? metalc4 A ND1 HIS 152 A HIS 152 1_555 I FE2 FES . A FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.912 ? metalc ? metalc5 B NE2 HIS 97 B HIS 97 1_555 M FE HEM . B HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.964 ? metalc ? metalc6 B NE2 HIS 111 B HIS 111 1_555 L FE HEM . B HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? metalc ? metalc7 B NE2 HIS 198 B HIS 198 1_555 M FE HEM . B HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? metalc ? metalc8 B NE2 HIS 212 B HIS 212 1_555 L FE HEM . B HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.506 ? metalc ? metalc9 C NE2 HIS 62 C HIS 62 1_555 S FE HEC . C HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc10 E SG CYS 129 E CYS 129 1_555 T FE1 FES . E FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc11 E ND1 HIS 131 E HIS 131 1_555 T FE2 FES . E FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? metalc ? metalc12 E SG CYS 149 E CYS 149 1_555 T FE1 FES . E FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? metalc ? metalc13 E ND1 HIS 152 E HIS 152 1_555 T FE2 FES . E FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.979 ? metalc ? metalc14 F NE2 HIS 97 F HIS 97 1_555 W FE HEM . F HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.975 ? metalc ? metalc15 F NE2 HIS 111 F HIS 111 1_555 V FE HEM . F HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? metalc ? metalc16 F NE2 HIS 198 F HIS 198 1_555 W FE HEM . F HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? metalc ? metalc17 F NE2 HIS 212 F HIS 212 1_555 V FE HEM . F HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? metalc ? metalc18 G NE2 HIS 62 G HIS 62 1_555 CA FE HEC . G HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.929 ? # _chem_comp.formula 'C34 H34 Fe N4 O4' _chem_comp.formula_weight 618.503 _chem_comp.id HEC _chem_comp.mon_nstd_flag . _chem_comp.name 'HEME C' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8ASI _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 5 FES A 1 201 200 FES FES . J 6 PEE A 1 202 6 PEE PEE . K 6 PEE A 1 203 3 PEE PEE . L 7 HEM B 1 501 501 HEM HEM . M 7 HEM B 1 502 502 HEM HEM . N 6 PEE B 1 503 1 PEE PEE . O 6 PEE B 1 504 3 PEE PEE . P 6 PEE B 1 505 7 PEE PEE . Q 6 PEE B 1 506 9 PEE PEE . R 6 PEE B 1 507 2 PEE PEE . S 8 HEC C 1 301 323 HEC HEC . T 5 FES E 1 201 200 FES FES . U 6 PEE E 1 202 10 PEE PEE . V 7 HEM F 1 501 501 HEM HEM . W 7 HEM F 1 502 502 HEM HEM . X 9 U10 F 1 503 13 U10 U10 . Y 6 PEE F 1 504 2 PEE PEE . Z 6 PEE F 1 505 5 PEE PEE . AA 6 PEE F 1 506 12 PEE PEE . BA 6 PEE F 1 507 1 PEE PEE . CA 8 HEC G 1 301 323 HEC HEC . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE HEC . . . CA 8 115.03 157.402 157.765 1 75.66 ? FE HEC 301 G 1 HETATM 2 C CHA HEC . . . CA 8 113.721 157.275 154.563 1 75.66 ? CHA HEC 301 G 1 HETATM 3 C CHB HEC . . . CA 8 118.155 157.79 156.472 1 75.66 ? CHB HEC 301 G 1 HETATM 4 C CHC HEC . . . CA 8 116.306 157.787 160.91 1 75.66 ? CHC HEC 301 G 1 HETATM 5 C CHD HEC . . . CA 8 112.115 156.249 159.071 1 75.66 ? CHD HEC 301 G 1 HETATM 6 N NA HEC . . . CA 8 115.772 157.525 155.886 1 75.66 ? NA HEC 301 G 1 HETATM 7 C C1A HEC . . . CA 8 115.084 157.425 154.693 1 75.66 ? C1A HEC 301 G 1 HETATM 8 C C2A HEC . . . CA 8 116.04 157.525 153.609 1 75.66 ? C2A HEC 301 G 1 HETATM 9 C C3A HEC . . . CA 8 117.255 157.664 154.156 1 75.66 ? C3A HEC 301 G 1 HETATM 10 C C4A HEC . . . CA 8 117.11 157.67 155.587 1 75.66 ? C4A HEC 301 G 1 HETATM 11 C CMA HEC . . . CA 8 118.624 157.812 153.471 1 75.66 ? CMA HEC 301 G 1 HETATM 12 C CAA HEC . . . CA 8 115.653 157.442 152.115 1 75.66 ? CAA HEC 301 G 1 HETATM 13 C CBA HEC . . . CA 8 116.162 158.626 151.313 1 75.66 ? CBA HEC 301 G 1 HETATM 14 C CGA HEC . . . CA 8 114.948 159.234 150.693 1 75.66 ? CGA HEC 301 G 1 HETATM 15 O O1A HEC . . . CA 8 114.639 158.93 149.512 1 75.66 ? O1A HEC 301 G 1 HETATM 16 O O2A HEC . . . CA 8 114.301 160.025 151.418 1 75.66 ? O2A HEC 301 G 1 HETATM 17 N NB HEC . . . CA 8 116.925 157.701 158.587 1 75.66 ? NB HEC 301 G 1 HETATM 18 C C1B HEC . . . CA 8 118.058 157.9 157.835 1 75.66 ? C1B HEC 301 G 1 HETATM 19 C C2B HEC . . . CA 8 119.141 158.22 158.73 1 75.66 ? C2B HEC 301 G 1 HETATM 20 C C3B HEC . . . CA 8 118.665 158.326 159.974 1 75.66 ? C3B HEC 301 G 1 HETATM 21 C C4B HEC . . . CA 8 117.257 157.903 159.914 1 75.66 ? C4B HEC 301 G 1 HETATM 22 C CMB HEC . . . CA 8 120.572 158.565 158.263 1 75.66 ? CMB HEC 301 G 1 HETATM 23 C CAB HEC . . . CA 8 119.575 158.623 161.205 1 75.66 ? CAB HEC 301 G 1 HETATM 24 C CBB HEC . . . CA 8 118.734 158.817 162.459 1 75.66 ? CBB HEC 301 G 1 HETATM 25 N NC HEC . . . CA 8 114.346 156.998 159.645 1 75.66 ? NC HEC 301 G 1 HETATM 26 C C1C HEC . . . CA 8 114.996 157.386 160.794 1 75.66 ? C1C HEC 301 G 1 HETATM 27 C C2C HEC . . . CA 8 114.128 157.103 161.912 1 75.66 ? C2C HEC 301 G 1 HETATM 28 C C3C HEC . . . CA 8 112.899 156.902 161.427 1 75.66 ? C3C HEC 301 G 1 HETATM 29 C C4C HEC . . . CA 8 113.047 156.68 159.988 1 75.66 ? C4C HEC 301 G 1 HETATM 30 C CMC HEC . . . CA 8 114.412 157.664 163.323 1 75.66 ? CMC HEC 301 G 1 HETATM 31 C CAC HEC . . . CA 8 111.676 156.7 162.369 1 75.66 ? CAC HEC 301 G 1 HETATM 32 C CBC HEC . . . CA 8 110.306 156.49 161.692 1 75.66 ? CBC HEC 301 G 1 HETATM 33 N ND HEC . . . CA 8 113.211 156.84 156.927 1 75.66 ? ND HEC 301 G 1 HETATM 34 C C1D HEC . . . CA 8 112.139 156.424 157.706 1 75.66 ? C1D HEC 301 G 1 HETATM 35 C C2D HEC . . . CA 8 111.012 156.185 156.847 1 75.66 ? C2D HEC 301 G 1 HETATM 36 C C3D HEC . . . CA 8 111.484 156.508 155.427 1 75.66 ? C3D HEC 301 G 1 HETATM 37 C C4D HEC . . . CA 8 112.869 156.901 155.577 1 75.66 ? C4D HEC 301 G 1 HETATM 38 C CMD HEC . . . CA 8 109.62 155.718 157.302 1 75.66 ? CMD HEC 301 G 1 HETATM 39 C CAD HEC . . . CA 8 110.635 156.403 154.141 1 75.66 ? CAD HEC 301 G 1 HETATM 40 C CBD HEC . . . CA 8 109.98 157.755 153.879 1 75.66 ? CBD HEC 301 G 1 HETATM 41 C CGD HEC . . . CA 8 110.105 158.165 152.437 1 75.66 ? CGD HEC 301 G 1 HETATM 42 O O1D HEC . . . CA 8 109.123 158.741 151.903 1 75.66 ? O1D HEC 301 G 1 HETATM 43 O O2D HEC . . . CA 8 111.175 157.923 151.824 1 75.66 ? O2D HEC 301 G 1 # _model_server_stats.io_time_ms 86 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 323 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 43 #