data_8ASI # _model_server_result.job_id fh-Y4cU4LWEXEZ4MDk_ROg _model_server_result.datetime_utc '2025-03-06 09:25:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8asi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"BA","auth_seq_id":507}' # _entry.id 8ASI # _exptl.entry_id 8ASI _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 744.034 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8ASI _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8ASI _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 J N N ? 6 K N N ? 6 N N N ? 6 O N N ? 6 P N N ? 6 Q N N ? 6 R N N ? 6 U N N ? 6 Y N N ? 6 Z N N ? 6 AA N N ? 6 BA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 134 A CYS 134 1_555 A SG CYS 151 A CYS 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf2 E SG CYS 134 E CYS 134 1_555 E SG CYS 151 E CYS 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? covale ? covale1 C SG CYS 58 C CYS 58 1_555 S C3B HEC . C HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.739 ? covale ? covale2 C SG CYS 61 C CYS 61 1_555 S CAC HEC . C HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.836 ? covale ? covale3 G SG CYS 58 G CYS 58 1_555 CA CAB HEC . G HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.782 ? metalc ? metalc1 A SG CYS 129 A CYS 129 1_555 I FE1 FES . A FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.274 ? metalc ? metalc2 A ND1 HIS 131 A HIS 131 1_555 I FE2 FES . A FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? metalc ? metalc3 A SG CYS 149 A CYS 149 1_555 I FE1 FES . A FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? metalc ? metalc4 A ND1 HIS 152 A HIS 152 1_555 I FE2 FES . A FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.912 ? metalc ? metalc5 B NE2 HIS 97 B HIS 97 1_555 M FE HEM . B HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.964 ? metalc ? metalc6 B NE2 HIS 111 B HIS 111 1_555 L FE HEM . B HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? metalc ? metalc7 B NE2 HIS 198 B HIS 198 1_555 M FE HEM . B HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? metalc ? metalc8 B NE2 HIS 212 B HIS 212 1_555 L FE HEM . B HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.506 ? metalc ? metalc9 C NE2 HIS 62 C HIS 62 1_555 S FE HEC . C HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc10 E SG CYS 129 E CYS 129 1_555 T FE1 FES . E FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc11 E ND1 HIS 131 E HIS 131 1_555 T FE2 FES . E FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? metalc ? metalc12 E SG CYS 149 E CYS 149 1_555 T FE1 FES . E FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? metalc ? metalc13 E ND1 HIS 152 E HIS 152 1_555 T FE2 FES . E FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.979 ? metalc ? metalc14 F NE2 HIS 97 F HIS 97 1_555 W FE HEM . F HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.975 ? metalc ? metalc15 F NE2 HIS 111 F HIS 111 1_555 V FE HEM . F HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? metalc ? metalc16 F NE2 HIS 198 F HIS 198 1_555 W FE HEM . F HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? metalc ? metalc17 F NE2 HIS 212 F HIS 212 1_555 V FE HEM . F HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? metalc ? metalc18 G NE2 HIS 62 G HIS 62 1_555 CA FE HEC . G HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.929 ? # _chem_comp.formula 'C41 H78 N O8 P' _chem_comp.formula_weight 744.034 _chem_comp.id PEE _chem_comp.mon_nstd_flag n _chem_comp.name 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms DOPE # _atom_sites.entry_id 8ASI _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 5 FES A 1 201 200 FES FES . J 6 PEE A 1 202 6 PEE PEE . K 6 PEE A 1 203 3 PEE PEE . L 7 HEM B 1 501 501 HEM HEM . M 7 HEM B 1 502 502 HEM HEM . N 6 PEE B 1 503 1 PEE PEE . O 6 PEE B 1 504 3 PEE PEE . P 6 PEE B 1 505 7 PEE PEE . Q 6 PEE B 1 506 9 PEE PEE . R 6 PEE B 1 507 2 PEE PEE . S 8 HEC C 1 301 323 HEC HEC . T 5 FES E 1 201 200 FES FES . U 6 PEE E 1 202 10 PEE PEE . V 7 HEM F 1 501 501 HEM HEM . W 7 HEM F 1 502 502 HEM HEM . X 9 U10 F 1 503 13 U10 U10 . Y 6 PEE F 1 504 2 PEE PEE . Z 6 PEE F 1 505 5 PEE PEE . AA 6 PEE F 1 506 12 PEE PEE . BA 6 PEE F 1 507 1 PEE PEE . CA 8 HEC G 1 301 323 HEC HEC . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C27 PEE . . . BA 6 120.932 141.889 109.468 1 77.98 ? C27 PEE 507 F 1 HETATM 2 C C26 PEE . . . BA 6 121.99 140.941 110.087 1 77.98 ? C26 PEE 507 F 1 HETATM 3 C C25 PEE . . . BA 6 123.126 140.597 109.078 1 77.98 ? C25 PEE 507 F 1 HETATM 4 C C24 PEE . . . BA 6 122.611 139.745 107.883 1 77.98 ? C24 PEE 507 F 1 HETATM 5 C C23 PEE . . . BA 6 122.994 140.407 106.529 1 77.98 ? C23 PEE 507 F 1 HETATM 6 C C22 PEE . . . BA 6 121.955 141.507 106.171 1 77.98 ? C22 PEE 507 F 1 HETATM 7 C C21 PEE . . . BA 6 121.786 141.787 104.647 1 77.98 ? C21 PEE 507 F 1 HETATM 8 C C20 PEE . . . BA 6 120.88 140.636 104.117 1 77.98 ? C20 PEE 507 F 1 HETATM 9 C C19 PEE . . . BA 6 120.982 140.331 102.59 1 77.98 ? C19 PEE 507 F 1 HETATM 10 C C18 PEE . . . BA 6 120.663 141.291 101.695 1 77.98 ? C18 PEE 507 F 1 HETATM 11 C C17 PEE . . . BA 6 120.718 140.996 100.167 1 77.98 ? C17 PEE 507 F 1 HETATM 12 C C16 PEE . . . BA 6 121.38 142.056 99.228 1 77.98 ? C16 PEE 507 F 1 HETATM 13 C C15 PEE . . . BA 6 121.588 141.315 97.86 1 77.98 ? C15 PEE 507 F 1 HETATM 14 C C14 PEE . . . BA 6 121.483 142.266 96.614 1 77.98 ? C14 PEE 507 F 1 HETATM 15 C C13 PEE . . . BA 6 122.623 143.325 96.598 1 77.98 ? C13 PEE 507 F 1 HETATM 16 C C12 PEE . . . BA 6 122.743 144.079 95.233 1 77.98 ? C12 PEE 507 F 1 HETATM 17 C C11 PEE . . . BA 6 123.928 143.51 94.393 1 77.98 ? C11 PEE 507 F 1 HETATM 18 C C10 PEE . . . BA 6 123.821 141.971 94.295 1 77.98 ? C10 PEE 507 F 1 HETATM 19 O O4 PEE . . . BA 6 123.173 141.459 93.44 1 77.98 ? O4 PEE 507 F 1 HETATM 20 O O2 PEE . . . BA 6 124.503 141.21 95.258 1 77.98 ? O2 PEE 507 F 1 HETATM 21 C C2 PEE . . . BA 6 125.205 140.079 94.799 1 77.98 ? C2 PEE 507 F 1 HETATM 22 C C1 PEE . . . BA 6 126.293 140.449 93.787 1 77.98 ? C1 PEE 507 F 1 HETATM 23 O O3P PEE . . . BA 6 126.768 139.196 93.339 1 77.98 ? O3P PEE 507 F 1 HETATM 24 P P PEE . . . BA 6 126.692 138.778 91.748 1 77.98 ? P PEE 507 F 1 HETATM 25 O O2P PEE . . . BA 6 127.948 139.252 91.038 1 77.98 ? O2P PEE 507 F 1 HETATM 26 O O1P PEE . . . BA 6 125.46 139.374 91.094 1 77.98 ? O1P PEE 507 F 1 HETATM 27 O O4P PEE . . . BA 6 126.625 137.124 91.716 1 77.98 ? O4P PEE 507 F 1 HETATM 28 C C4 PEE . . . BA 6 125.493 136.548 92.321 1 77.98 ? C4 PEE 507 F 1 HETATM 29 C C5 PEE . . . BA 6 125.797 136.253 93.808 1 77.98 ? C5 PEE 507 F 1 HETATM 30 N N PEE . . . BA 6 124.648 136.636 94.642 1 77.98 ? N PEE 507 F 1 HETATM 31 C C3 PEE . . . BA 6 125.841 139.403 96.006 1 77.98 ? C3 PEE 507 F 1 HETATM 32 O O3 PEE . . . BA 6 124.795 138.868 96.772 1 77.98 ? O3 PEE 507 F 1 HETATM 33 C C30 PEE . . . BA 6 125.119 138.41 98.066 1 77.98 ? C30 PEE 507 F 1 HETATM 34 O O5 PEE . . . BA 6 125.372 137.259 98.241 1 77.98 ? O5 PEE 507 F 1 HETATM 35 C C31 PEE . . . BA 6 125.159 139.39 99.245 1 77.98 ? C31 PEE 507 F 1 HETATM 36 C C32 PEE . . . BA 6 123.807 139.301 100.007 1 77.98 ? C32 PEE 507 F 1 HETATM 37 C C33 PEE . . . BA 6 123.681 138.017 100.876 1 77.98 ? C33 PEE 507 F 1 HETATM 38 C C34 PEE . . . BA 6 124.641 138.022 102.093 1 77.98 ? C34 PEE 507 F 1 HETATM 39 C C35 PEE . . . BA 6 125.742 136.951 101.88 1 77.98 ? C35 PEE 507 F 1 HETATM 40 C C36 PEE . . . BA 6 126.814 137.034 103.005 1 77.98 ? C36 PEE 507 F 1 HETATM 41 C C37 PEE . . . BA 6 127.119 135.569 103.422 1 77.98 ? C37 PEE 507 F 1 HETATM 42 C C38 PEE . . . BA 6 127.851 135.445 104.793 1 77.98 ? C38 PEE 507 F 1 HETATM 43 C C39 PEE . . . BA 6 128.529 134.294 104.797 1 77.98 ? C39 PEE 507 F 1 HETATM 44 C C40 PEE . . . BA 6 129.041 134.589 106.247 1 77.98 ? C40 PEE 507 F 1 HETATM 45 C C41 PEE . . . BA 6 128.096 133.868 107.263 1 77.98 ? C41 PEE 507 F 1 HETATM 46 C C42 PEE . . . BA 6 128.757 133.838 108.669 1 77.98 ? C42 PEE 507 F 1 HETATM 47 C C43 PEE . . . BA 6 129.666 132.574 108.772 1 77.98 ? C43 PEE 507 F 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 332 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 47 #