data_8ASJ
#
_model_server_result.job_id            nYEp0S8J4bVzkjVP1aEuUQ 
_model_server_result.datetime_utc      '2025-03-06 09:27:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8asj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"U","auth_seq_id":202}' 
#
_entry.id    8ASJ 
#
_exptl.entry_id    8ASJ 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              744.034 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-dioleoyl-sn-glycero-3-phosphoethanolamine 
_entity.pdbx_number_of_molecules    12 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8ASJ 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8ASJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    octameric 
_pdbx_struct_assembly.oligomeric_count      8 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 J N N 
? 6 M N N 
? 6 N N N 
? 6 O N N 
? 6 P N N 
? 6 Q N N 
? 6 R N N 
? 6 U N N 
? 6 X N N 
? 6 Y N N 
? 6 Z N N 
? 6 AA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 134 A CYS 134 1_555 A SG CYS 151 A CYS 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf2 E SG CYS 134 E CYS 134 1_555 E SG CYS 151 E CYS 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
covale ? covale1 C SG CYS 58 C CYS 58 1_555 S C3B HEC . C HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.748 ? 
covale ? covale2 G SG CYS 58 G CYS 58 1_555 CA CAB HEC . G HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.954 ? 
metalc ? metalc1 A SG CYS 129 A CYS 129 1_555 I FE1 FES . A FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? 
metalc ? metalc2 A ND1 HIS 131 A HIS 131 1_555 I FE2 FES . A FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? 
metalc ? metalc3 A SG CYS 149 A CYS 149 1_555 I FE1 FES . A FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? 
metalc ? metalc4 A ND1 HIS 152 A HIS 152 1_555 I FE2 FES . A FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? 
metalc ? metalc5 B NE2 HIS 97 B HIS 97 1_555 L FE HEM . B HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? 
metalc ? metalc6 B NE2 HIS 111 B HIS 111 1_555 K FE HEM . B HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? 
metalc ? metalc7 B NE2 HIS 198 B HIS 198 1_555 L FE HEM . B HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? 
metalc ? metalc8 B NE2 HIS 212 B HIS 212 1_555 K FE HEM . B HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? 
metalc ? metalc9 C NE2 HIS 62 C HIS 62 1_555 S FE HEC . C HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.151 ? 
metalc ? metalc10 C SD MET 207 C MET 207 1_555 S FE HEC . C HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.49 ? 
metalc ? metalc11 E SG CYS 129 E CYS 129 1_555 T FE1 FES . E FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? 
metalc ? metalc12 E ND1 HIS 131 E HIS 131 1_555 T FE2 FES . E FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.717 ? 
metalc ? metalc13 E NE2 HIS 131 E HIS 131 1_555 T FE2 FES . E FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? 
metalc ? metalc14 E SG CYS 149 E CYS 149 1_555 T FE1 FES . E FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? 
metalc ? metalc15 E ND1 HIS 152 E HIS 152 1_555 T FE2 FES . E FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.641 ? 
metalc ? metalc16 F NE2 HIS 97 F HIS 97 1_555 W FE HEM . F HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? 
metalc ? metalc17 F NE2 HIS 111 F HIS 111 1_555 V FE HEM . F HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? 
metalc ? metalc18 F NE2 HIS 198 F HIS 198 1_555 W FE HEM . F HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? 
metalc ? metalc19 F NE2 HIS 212 F HIS 212 1_555 V FE HEM . F HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.197 ? 
metalc ? metalc20 G NE2 HIS 62 G HIS 62 1_555 CA FE HEC . G HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.98 ? 
metalc ? metalc21 G SD MET 207 G MET 207 1_555 CA FE HEC . G HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? 
#
_chem_comp.formula           'C41 H78 N O8 P' 
_chem_comp.formula_weight    744.034 
_chem_comp.id                PEE 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              1,2-dioleoyl-sn-glycero-3-phosphoethanolamine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     DOPE 
#
_atom_sites.entry_id                     8ASJ 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 5 FES A 1 201 200 FES FES . 
J 6 PEE A 1 202 3 PEE PEE . 
K 7 HEM B 1 501 501 HEM HEM . 
L 7 HEM B 1 502 502 HEM HEM . 
M 6 PEE B 1 503 1 PEE PEE . 
N 6 PEE B 1 504 3 PEE PEE . 
O 6 PEE B 1 505 7 PEE PEE . 
P 6 PEE B 1 506 9 PEE PEE . 
Q 6 PEE B 1 507 1 PEE PEE . 
R 6 PEE B 1 508 2 PEE PEE . 
S 8 HEC C 1 301 323 HEC HEC . 
T 5 FES E 1 201 200 FES FES . 
U 6 PEE E 1 202 10 PEE PEE . 
V 7 HEM F 1 501 501 HEM HEM . 
W 7 HEM F 1 502 502 HEM HEM . 
X 6 PEE F 1 503 2 PEE PEE . 
Y 6 PEE F 1 504 5 PEE PEE . 
Z 6 PEE F 1 505 6 PEE PEE . 
AA 6 PEE F 1 506 12 PEE PEE . 
BA 9 U10 F 1 507 13 U10 U10 . 
CA 8 HEC G 1 301 323 HEC HEC . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C18 PEE . . . U 6 142.463 140.708 133.176 1 91.35 ? C18 PEE 202 E 1 
HETATM 2 C C17 PEE . . . U 6 142.128 140.565 134.687 1 91.35 ? C17 PEE 202 E 1 
HETATM 3 C C16 PEE . . . U 6 141.982 141.981 135.328 1 91.35 ? C16 PEE 202 E 1 
HETATM 4 C C15 PEE . . . U 6 143.288 142.343 136.114 1 91.35 ? C15 PEE 202 E 1 
HETATM 5 C C14 PEE . . . U 6 143.29 141.703 137.549 1 91.35 ? C14 PEE 202 E 1 
HETATM 6 C C13 PEE . . . U 6 142.336 142.531 138.474 1 91.35 ? C13 PEE 202 E 1 
HETATM 7 C C12 PEE . . . U 6 143.187 143.592 139.238 1 91.35 ? C12 PEE 202 E 1 
HETATM 8 C C11 PEE . . . U 6 142.392 144.237 140.412 1 91.35 ? C11 PEE 202 E 1 
HETATM 9 C C10 PEE . . . U 6 142.461 143.414 141.728 1 91.35 ? C10 PEE 202 E 1 
HETATM 10 O O4 PEE . . . U 6 142.167 142.264 141.729 1 91.35 ? O4 PEE 202 E 1 
HETATM 11 O O2 PEE . . . U 6 142.849 144.052 142.927 1 91.35 ? O2 PEE 202 E 1 
HETATM 12 C C2 PEE . . . U 6 144.142 143.778 143.449 1 91.35 ? C2 PEE 202 E 1 
HETATM 13 C C1 PEE . . . U 6 144.135 142.462 144.238 1 91.35 ? C1 PEE 202 E 1 
HETATM 14 O O3P PEE . . . U 6 143.357 142.596 145.418 1 91.35 ? O3P PEE 202 E 1 
HETATM 15 P P PEE . . . U 6 144.06 143.183 146.792 1 91.35 ? P PEE 202 E 1 
HETATM 16 O O2P PEE . . . U 6 145.259 144.045 146.432 1 91.35 ? O2P PEE 202 E 1 
HETATM 17 O O1P PEE . . . U 6 144.526 142.03 147.66 1 91.35 ? O1P PEE 202 E 1 
HETATM 18 O O4P PEE . . . U 6 142.962 144.108 147.622 1 91.35 ? O4P PEE 202 E 1 
HETATM 19 C C4 PEE . . . U 6 142.201 143.515 148.645 1 91.35 ? C4 PEE 202 E 1 
HETATM 20 C C5 PEE . . . U 6 141.401 142.317 148.083 1 91.35 ? C5 PEE 202 E 1 
HETATM 21 N N PEE . . . U 6 140.324 141.961 149.018 1 91.35 ? N PEE 202 E 1 
HETATM 22 C C3 PEE . . . U 6 145.196 143.707 142.35 1 91.35 ? C3 PEE 202 E 1 
HETATM 23 O O3 PEE . . . U 6 146.358 144.392 142.751 1 91.35 ? O3 PEE 202 E 1 
HETATM 24 C C30 PEE . . . U 6 146.874 145.297 141.795 1 91.35 ? C30 PEE 202 E 1 
HETATM 25 O O5 PEE . . . U 6 146.997 146.45 142.073 1 91.35 ? O5 PEE 202 E 1 
HETATM 26 C C31 PEE . . . U 6 147.275 144.798 140.4 1 91.35 ? C31 PEE 202 E 1 
HETATM 27 C C32 PEE . . . U 6 146.231 145.292 139.36 1 91.35 ? C32 PEE 202 E 1 
HETATM 28 C C33 PEE . . . U 6 146.684 144.937 137.916 1 91.35 ? C33 PEE 202 E 1 
HETATM 29 C C34 PEE . . . U 6 147.458 146.113 137.268 1 91.35 ? C34 PEE 202 E 1 
HETATM 30 C C35 PEE . . . U 6 148.191 145.576 136.009 1 91.35 ? C35 PEE 202 E 1 
HETATM 31 C C36 PEE . . . U 6 147.139 145.299 134.896 1 91.35 ? C36 PEE 202 E 1 
HETATM 32 C C37 PEE . . . U 6 147.589 145.957 133.563 1 91.35 ? C37 PEE 202 E 1 
HETATM 33 C C38 PEE . . . U 6 146.84 145.276 132.377 1 91.35 ? C38 PEE 202 E 1 
HETATM 34 C C39 PEE . . . U 6 147.456 144.168 131.958 1 91.35 ? C39 PEE 202 E 1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           274 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           34 
#