data_8ASJ # _model_server_result.job_id mnS6nzpNmZct3_JdTPgpHQ _model_server_result.datetime_utc '2025-03-06 08:52:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8asj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"CA","auth_seq_id":301}' # _entry.id 8ASJ # _exptl.entry_id 8ASJ _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 618.503 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEME C' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8ASJ _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8ASJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 8 S N N ? 8 CA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 134 A CYS 134 1_555 A SG CYS 151 A CYS 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf2 E SG CYS 134 E CYS 134 1_555 E SG CYS 151 E CYS 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? covale ? covale1 C SG CYS 58 C CYS 58 1_555 S C3B HEC . C HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.748 ? covale ? covale2 G SG CYS 58 G CYS 58 1_555 CA CAB HEC . G HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.954 ? metalc ? metalc1 A SG CYS 129 A CYS 129 1_555 I FE1 FES . A FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc2 A ND1 HIS 131 A HIS 131 1_555 I FE2 FES . A FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? metalc ? metalc3 A SG CYS 149 A CYS 149 1_555 I FE1 FES . A FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? metalc ? metalc4 A ND1 HIS 152 A HIS 152 1_555 I FE2 FES . A FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? metalc ? metalc5 B NE2 HIS 97 B HIS 97 1_555 L FE HEM . B HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? metalc ? metalc6 B NE2 HIS 111 B HIS 111 1_555 K FE HEM . B HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc7 B NE2 HIS 198 B HIS 198 1_555 L FE HEM . B HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? metalc ? metalc8 B NE2 HIS 212 B HIS 212 1_555 K FE HEM . B HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? metalc ? metalc9 C NE2 HIS 62 C HIS 62 1_555 S FE HEC . C HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.151 ? metalc ? metalc10 C SD MET 207 C MET 207 1_555 S FE HEC . C HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.49 ? metalc ? metalc11 E SG CYS 129 E CYS 129 1_555 T FE1 FES . E FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? metalc ? metalc12 E ND1 HIS 131 E HIS 131 1_555 T FE2 FES . E FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.717 ? metalc ? metalc13 E NE2 HIS 131 E HIS 131 1_555 T FE2 FES . E FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? metalc ? metalc14 E SG CYS 149 E CYS 149 1_555 T FE1 FES . E FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? metalc ? metalc15 E ND1 HIS 152 E HIS 152 1_555 T FE2 FES . E FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.641 ? metalc ? metalc16 F NE2 HIS 97 F HIS 97 1_555 W FE HEM . F HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? metalc ? metalc17 F NE2 HIS 111 F HIS 111 1_555 V FE HEM . F HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc18 F NE2 HIS 198 F HIS 198 1_555 W FE HEM . F HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? metalc ? metalc19 F NE2 HIS 212 F HIS 212 1_555 V FE HEM . F HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.197 ? metalc ? metalc20 G NE2 HIS 62 G HIS 62 1_555 CA FE HEC . G HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.98 ? metalc ? metalc21 G SD MET 207 G MET 207 1_555 CA FE HEC . G HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? # _chem_comp.formula 'C34 H34 Fe N4 O4' _chem_comp.formula_weight 618.503 _chem_comp.id HEC _chem_comp.mon_nstd_flag . _chem_comp.name 'HEME C' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8ASJ _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 5 FES A 1 201 200 FES FES . J 6 PEE A 1 202 3 PEE PEE . K 7 HEM B 1 501 501 HEM HEM . L 7 HEM B 1 502 502 HEM HEM . M 6 PEE B 1 503 1 PEE PEE . N 6 PEE B 1 504 3 PEE PEE . O 6 PEE B 1 505 7 PEE PEE . P 6 PEE B 1 506 9 PEE PEE . Q 6 PEE B 1 507 1 PEE PEE . R 6 PEE B 1 508 2 PEE PEE . S 8 HEC C 1 301 323 HEC HEC . T 5 FES E 1 201 200 FES FES . U 6 PEE E 1 202 10 PEE PEE . V 7 HEM F 1 501 501 HEM HEM . W 7 HEM F 1 502 502 HEM HEM . X 6 PEE F 1 503 2 PEE PEE . Y 6 PEE F 1 504 5 PEE PEE . Z 6 PEE F 1 505 6 PEE PEE . AA 6 PEE F 1 506 12 PEE PEE . BA 9 U10 F 1 507 13 U10 U10 . CA 8 HEC G 1 301 323 HEC HEC . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE HEC . . . CA 8 114.971 157.321 157.918 1 77.01 ? FE HEC 301 G 1 HETATM 2 C CHA HEC . . . CA 8 113.828 157.323 154.68 1 77.01 ? CHA HEC 301 G 1 HETATM 3 C CHB HEC . . . CA 8 118.181 157.646 156.789 1 77.01 ? CHB HEC 301 G 1 HETATM 4 C CHC HEC . . . CA 8 116.032 157.8 161.098 1 77.01 ? CHC HEC 301 G 1 HETATM 5 C CHD HEC . . . CA 8 112.006 156.135 159.056 1 77.01 ? CHD HEC 301 G 1 HETATM 6 N NA HEC . . . CA 8 115.835 157.464 156.083 1 77.01 ? NA HEC 301 G 1 HETATM 7 C C1A HEC . . . CA 8 115.188 157.432 154.864 1 77.01 ? C1A HEC 301 G 1 HETATM 8 C C2A HEC . . . CA 8 116.18 157.563 153.817 1 77.01 ? C2A HEC 301 G 1 HETATM 9 C C3A HEC . . . CA 8 117.385 157.64 154.407 1 77.01 ? C3A HEC 301 G 1 HETATM 10 C C4A HEC . . . CA 8 117.187 157.586 155.839 1 77.01 ? C4A HEC 301 G 1 HETATM 11 C CMA HEC . . . CA 8 118.774 157.778 153.748 1 77.01 ? CMA HEC 301 G 1 HETATM 12 C CAA HEC . . . CA 8 115.83 157.55 152.308 1 77.01 ? CAA HEC 301 G 1 HETATM 13 C CBA HEC . . . CA 8 116.369 158.76 151.554 1 77.01 ? CBA HEC 301 G 1 HETATM 14 C CGA HEC . . . CA 8 115.215 159.462 150.891 1 77.01 ? CGA HEC 301 G 1 HETATM 15 O O1A HEC . . . CA 8 114.975 159.214 149.681 1 77.01 ? O1A HEC 301 G 1 HETATM 16 O O2A HEC . . . CA 8 114.535 160.267 151.578 1 77.01 ? O2A HEC 301 G 1 HETATM 17 N NB HEC . . . CA 8 116.808 157.651 158.82 1 77.01 ? NB HEC 301 G 1 HETATM 18 C C1B HEC . . . CA 8 117.997 157.788 158.144 1 77.01 ? C1B HEC 301 G 1 HETATM 19 C C2B HEC . . . CA 8 119.029 158.088 159.107 1 77.01 ? C2B HEC 301 G 1 HETATM 20 C C3B HEC . . . CA 8 118.476 158.211 160.328 1 77.01 ? C3B HEC 301 G 1 HETATM 21 C C4B HEC . . . CA 8 117.048 157.876 160.161 1 77.01 ? C4B HEC 301 G 1 HETATM 22 C CMB HEC . . . CA 8 120.497 158.35 158.698 1 77.01 ? CMB HEC 301 G 1 HETATM 23 C CAB HEC . . . CA 8 119.293 158.498 161.636 1 77.01 ? CAB HEC 301 G 1 HETATM 24 C CBB HEC . . . CA 8 118.357 158.77 162.817 1 77.01 ? CBB HEC 301 G 1 HETATM 25 N NC HEC . . . CA 8 114.18 156.925 159.756 1 77.01 ? NC HEC 301 G 1 HETATM 26 C C1C HEC . . . CA 8 114.733 157.385 160.926 1 77.01 ? C1C HEC 301 G 1 HETATM 27 C C2C HEC . . . CA 8 113.791 157.127 161.995 1 77.01 ? C2C HEC 301 G 1 HETATM 28 C C3C HEC . . . CA 8 112.596 156.942 161.419 1 77.01 ? C3C HEC 301 G 1 HETATM 29 C C4C HEC . . . CA 8 112.859 156.63 160.015 1 77.01 ? C4C HEC 301 G 1 HETATM 30 C CMC HEC . . . CA 8 113.946 157.82 163.367 1 77.01 ? CMC HEC 301 G 1 HETATM 31 C CAC HEC . . . CA 8 111.288 156.785 162.251 1 77.01 ? CAC HEC 301 G 1 HETATM 32 C CBC HEC . . . CA 8 109.973 156.597 161.462 1 77.01 ? CBC HEC 301 G 1 HETATM 33 N ND HEC . . . CA 8 113.199 156.79 156.998 1 77.01 ? ND HEC 301 G 1 HETATM 34 C C1D HEC . . . CA 8 112.08 156.365 157.704 1 77.01 ? C1D HEC 301 G 1 HETATM 35 C C2D HEC . . . CA 8 110.985 156.198 156.785 1 77.01 ? C2D HEC 301 G 1 HETATM 36 C C3D HEC . . . CA 8 111.541 156.57 155.407 1 77.01 ? C3D HEC 301 G 1 HETATM 37 C C4D HEC . . . CA 8 112.926 156.922 155.639 1 77.01 ? C4D HEC 301 G 1 HETATM 38 C CMD HEC . . . CA 8 109.556 155.742 157.138 1 77.01 ? CMD HEC 301 G 1 HETATM 39 C CAD HEC . . . CA 8 110.769 156.555 154.071 1 77.01 ? CAD HEC 301 G 1 HETATM 40 C CBD HEC . . . CA 8 110.164 157.93 153.817 1 77.01 ? CBD HEC 301 G 1 HETATM 41 C CGD HEC . . . CA 8 110.413 158.329 152.387 1 77.01 ? CGD HEC 301 G 1 HETATM 42 O O1D HEC . . . CA 8 109.498 158.933 151.771 1 77.01 ? O1D HEC 301 G 1 HETATM 43 O O2D HEC . . . CA 8 111.52 158.04 151.863 1 77.01 ? O2D HEC 301 G 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 249 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 43 #