data_8ATL
#
_model_server_result.job_id            75BVt0KAlCuy6NVHOFoTFg 
_model_server_result.datetime_utc      '2025-01-13 07:48:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8atl 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1001}' 
#
_entry.id    8ATL 
#
_exptl.entry_id    8ATL 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              493.436 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            ~{N}-[6-methoxy-2-(2-morpholin-4-yl-2-oxidanylidene-ethyl)indazol-5-yl]-6-[(1~{R})-2,2,2-tris(fluoranyl)-1-oxidanyl-ethyl]pyridine-2-carboxamide 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8ATL 
_cell.length_a            87.864 
_cell.length_b            118.789 
_cell.length_c            138.136 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8ATL 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C LYS 77 AAA LYS 239 1_555 A N CSO 78 AAA CSO 240 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? 
covale ? covale2 A C CSO 78 AAA CSO 240 1_555 A N GLN 79 AAA GLN 241 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale3 A C MET 182 AAA MET 344 1_555 A N TPO 183 AAA TPO 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? 
covale ? covale4 A C TPO 183 AAA TPO 345 1_555 A N SEP 184 AAA SEP 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? 
covale ? covale5 A C SEP 184 AAA SEP 346 1_555 A N ARG 185 AAA ARG 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? 
covale ? covale6 B C MET 182 BBB MET 344 1_555 B N TPO 183 BBB TPO 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? 
covale ? covale7 B C TPO 183 BBB TPO 345 1_555 B N SEP 184 BBB SEP 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? 
covale ? covale8 B C SEP 184 BBB SEP 346 1_555 B N ARG 185 BBB ARG 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? 
#
_chem_comp.formula           'C22 H22 F3 N5 O5' 
_chem_comp.formula_weight    493.436 
_chem_comp.id                O6X 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              ~{N}-[6-methoxy-2-(2-morpholin-4-yl-2-oxidanylidene-ethyl)indazol-5-yl]-6-[(1~{R})-2,2,2-tris(fluoranyl)-1-oxidanyl-ethyl]pyridine-2-carboxamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C32 O31 O6X sing 251 n n 
C32 C33 O6X sing 252 n n 
O31 C30 O6X sing 253 n n 
C30 C29 O6X sing 254 n n 
C33 N28 O6X sing 255 n n 
N28 C29 O6X sing 256 n n 
N28 C26 O6X sing 257 n n 
O16 C13 O6X doub 258 n n 
C22 N23 O6X sing 259 n y 
C22 C18 O6X doub 260 n y 
C25 C26 O6X sing 261 n n 
C25 N23 O6X sing 262 n n 
C26 O27 O6X doub 263 n n 
N23 N24 O6X sing 264 n y 
C9 C8 O6X doub 265 n y 
C9 C10 O6X sing 266 n y 
C17 C18 O6X sing 267 n y 
C17 C15 O6X doub 268 n y 
C18 C19 O6X sing 269 n y 
C13 C10 O6X sing 270 n n 
C13 N14 O6X sing 271 n n 
C8 C7 O6X sing 272 n y 
C10 N11 O6X doub 273 n y 
N24 C19 O6X doub 274 n y 
C15 N14 O6X sing 275 n n 
C15 C21 O6X sing 276 n y 
C19 C20 O6X sing 277 n y 
C7 C6 O6X doub 278 n y 
N11 C6 O6X sing 279 n y 
C21 C20 O6X doub 280 n y 
C21 O34 O6X sing 281 n n 
C6 C5 O6X sing 282 n n 
O34 C35 O6X sing 283 n n 
F3 C2 O6X sing 284 n n 
C5 O12 O6X sing 285 n n 
C5 C2 O6X sing 286 n n 
F4 C2 O6X sing 287 n n 
C2 F1 O6X sing 288 n n 
C5 H1 O6X sing 289 n n 
C7 H2 O6X sing 290 n n 
C8 H3 O6X sing 291 n n 
C17 H4 O6X sing 292 n n 
C30 H5 O6X sing 293 n n 
C30 H6 O6X sing 294 n n 
C32 H7 O6X sing 295 n n 
C32 H8 O6X sing 296 n n 
C33 H9 O6X sing 297 n n 
C33 H10 O6X sing 298 n n 
C35 H11 O6X sing 299 n n 
C35 H12 O6X sing 300 n n 
C35 H13 O6X sing 301 n n 
C29 H14 O6X sing 302 n n 
C29 H15 O6X sing 303 n n 
C25 H16 O6X sing 304 n n 
C25 H17 O6X sing 305 n n 
C22 H18 O6X sing 306 n n 
C20 H19 O6X sing 307 n n 
N14 H20 O6X sing 308 n n 
C9 H21 O6X sing 309 n n 
O12 H22 O6X sing 310 n n 
#
_atom_sites.entry_id                     8ATL 
_atom_sites.fract_transf_matrix[1][1]    0.011381 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008418 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007239 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 O6X AAA 1 1001 1001 O6X INX . 
D 3 O6X BBB 1 1001 1001 O6X INX . 
E 4 HOH AAA 1 1101 70 HOH HOH . 
E 4 HOH AAA 2 1102 3 HOH HOH . 
E 4 HOH AAA 3 1103 11 HOH HOH . 
E 4 HOH AAA 4 1104 66 HOH HOH . 
E 4 HOH AAA 5 1105 10 HOH HOH . 
E 4 HOH AAA 6 1106 16 HOH HOH . 
E 4 HOH AAA 7 1107 54 HOH HOH . 
E 4 HOH AAA 8 1108 57 HOH HOH . 
E 4 HOH AAA 9 1109 1 HOH HOH . 
E 4 HOH AAA 10 1110 9 HOH HOH . 
E 4 HOH AAA 11 1111 8 HOH HOH . 
E 4 HOH AAA 12 1112 44 HOH HOH . 
E 4 HOH AAA 13 1113 5 HOH HOH . 
E 4 HOH AAA 14 1114 45 HOH HOH . 
E 4 HOH AAA 15 1115 7 HOH HOH . 
E 4 HOH AAA 16 1116 2 HOH HOH . 
E 4 HOH AAA 17 1117 15 HOH HOH . 
E 4 HOH AAA 18 1118 14 HOH HOH . 
E 4 HOH AAA 19 1119 13 HOH HOH . 
E 4 HOH AAA 20 1120 43 HOH HOH . 
E 4 HOH AAA 21 1121 56 HOH HOH . 
E 4 HOH AAA 22 1122 46 HOH HOH . 
E 4 HOH AAA 23 1123 6 HOH HOH . 
E 4 HOH AAA 24 1124 4 HOH HOH . 
E 4 HOH AAA 25 1125 58 HOH HOH . 
E 4 HOH AAA 26 1126 47 HOH HOH . 
E 4 HOH AAA 27 1127 55 HOH HOH . 
F 4 HOH BBB 1 1101 64 HOH HOH . 
F 4 HOH BBB 2 1102 17 HOH HOH . 
F 4 HOH BBB 3 1103 27 HOH HOH . 
F 4 HOH BBB 4 1104 48 HOH HOH . 
F 4 HOH BBB 5 1105 37 HOH HOH . 
F 4 HOH BBB 6 1106 28 HOH HOH . 
F 4 HOH BBB 7 1107 63 HOH HOH . 
F 4 HOH BBB 8 1108 26 HOH HOH . 
F 4 HOH BBB 9 1109 30 HOH HOH . 
F 4 HOH BBB 10 1110 31 HOH HOH . 
F 4 HOH BBB 11 1111 36 HOH HOH . 
F 4 HOH BBB 12 1112 40 HOH HOH . 
F 4 HOH BBB 13 1113 21 HOH HOH . 
F 4 HOH BBB 14 1114 19 HOH HOH . 
F 4 HOH BBB 15 1115 35 HOH HOH . 
F 4 HOH BBB 16 1116 62 HOH HOH . 
F 4 HOH BBB 17 1117 53 HOH HOH . 
F 4 HOH BBB 18 1118 42 HOH HOH . 
F 4 HOH BBB 19 1119 68 HOH HOH . 
F 4 HOH BBB 20 1120 61 HOH HOH . 
F 4 HOH BBB 21 1121 50 HOH HOH . 
F 4 HOH BBB 22 1122 67 HOH HOH . 
F 4 HOH BBB 23 1123 29 HOH HOH . 
F 4 HOH BBB 24 1124 22 HOH HOH . 
F 4 HOH BBB 25 1125 65 HOH HOH . 
F 4 HOH BBB 26 1126 60 HOH HOH . 
F 4 HOH BBB 27 1127 34 HOH HOH . 
F 4 HOH BBB 28 1128 25 HOH HOH . 
F 4 HOH BBB 29 1129 49 HOH HOH . 
F 4 HOH BBB 30 1130 69 HOH HOH . 
F 4 HOH BBB 31 1131 52 HOH HOH . 
F 4 HOH BBB 32 1132 23 HOH HOH . 
F 4 HOH BBB 33 1133 59 HOH HOH . 
F 4 HOH BBB 34 1134 24 HOH HOH . 
F 4 HOH BBB 35 1135 41 HOH HOH . 
F 4 HOH BBB 36 1136 51 HOH HOH . 
F 4 HOH BBB 37 1137 18 HOH HOH . 
F 4 HOH BBB 38 1138 38 HOH HOH . 
F 4 HOH BBB 39 1139 12 HOH HOH . 
F 4 HOH BBB 40 1140 33 HOH HOH . 
F 4 HOH BBB 41 1141 20 HOH HOH . 
F 4 HOH BBB 42 1142 32 HOH HOH . 
F 4 HOH BBB 43 1143 39 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C2 O6X . . . C 3 15.249 18.634 9.867 1 48.76 0 C2 O6X 1001 AAA 1 
HETATM 2 C C5 O6X . . . C 3 14.672 19.975 9.461 1 42.9 0 C5 O6X 1001 AAA 1 
HETATM 3 C C6 O6X . . . C 3 14.906 20.22 8.012 1 40.44 0 C6 O6X 1001 AAA 1 
HETATM 4 C C7 O6X . . . C 3 13.862 20.597 7.172 1 33.71 0 C7 O6X 1001 AAA 1 
HETATM 5 C C8 O6X . . . C 3 14.125 20.845 5.835 1 36.43 0 C8 O6X 1001 AAA 1 
HETATM 6 C C15 O6X . . . C 3 20.134 20.142 6.658 1 32.15 0 C15 O6X 1001 AAA 1 
HETATM 7 C C17 O6X . . . C 3 20.913 20.384 5.529 1 33.8 0 C17 O6X 1001 AAA 1 
HETATM 8 C C18 O6X . . . C 3 22.305 20.396 5.651 1 35.66 0 C18 O6X 1001 AAA 1 
HETATM 9 C C19 O6X . . . C 3 22.93 20.2 6.875 1 37.56 0 C19 O6X 1001 AAA 1 
HETATM 10 C C21 O6X . . . C 3 20.797 19.953 7.966 1 34.71 0 C21 O6X 1001 AAA 1 
HETATM 11 C C30 O6X . . . C 3 29.133 21.534 2.936 1 71.89 0 C30 O6X 1001 AAA 1 
HETATM 12 C C32 O6X . . . C 3 28.15 23.591 2.342 1 60.95 0 C32 O6X 1001 AAA 1 
HETATM 13 C C33 O6X . . . C 3 27.609 23.776 3.752 1 64.37 0 C33 O6X 1001 AAA 1 
HETATM 14 C C35 O6X . . . C 3 20.35 20.089 10.397 1 40.84 0 C35 O6X 1001 AAA 1 
HETATM 15 O O27 O6X . . . C 3 25.457 22.847 5.338 1 58.43 0 O27 O6X 1001 AAA 1 
HETATM 16 C C26 O6X . . . C 3 26.247 22.064 4.842 1 52.66 0 C26 O6X 1001 AAA 1 
HETATM 17 N N28 O6X . . . C 3 27.43 22.449 4.343 1 64.01 0 N28 O6X 1001 AAA 1 
HETATM 18 O O31 O6X . . . C 3 29.358 22.844 2.416 1 67.87 0 O31 O6X 1001 AAA 1 
HETATM 19 C C29 O6X . . . C 3 28.645 21.632 4.376 1 68.19 0 C29 O6X 1001 AAA 1 
HETATM 20 C C25 O6X . . . C 3 25.855 20.613 4.813 1 44.92 0 C25 O6X 1001 AAA 1 
HETATM 21 N N23 O6X . . . C 3 24.459 20.51 5.249 1 46.76 0 N23 O6X 1001 AAA 1 
HETATM 22 C C22 O6X . . . C 3 23.281 20.6 4.63 1 38.07 0 C22 O6X 1001 AAA 1 
HETATM 23 N N24 O6X . . . C 3 24.27 20.269 6.629 1 43.73 0 N24 O6X 1001 AAA 1 
HETATM 24 C C20 O6X . . . C 3 22.188 19.973 8.033 1 38.37 0 C20 O6X 1001 AAA 1 
HETATM 25 O O34 O6X . . . C 3 19.994 19.741 9.059 1 38.85 0 O34 O6X 1001 AAA 1 
HETATM 26 N N14 O6X . . . C 3 18.736 20.154 6.695 1 35.86 0 N14 O6X 1001 AAA 1 
HETATM 27 C C13 O6X . . . C 3 17.852 20.227 5.701 1 35.26 0 C13 O6X 1001 AAA 1 
HETATM 28 O O16 O6X . . . C 3 18.133 20.304 4.504 1 31.74 0 O16 O6X 1001 AAA 1 
HETATM 29 C C10 O6X . . . C 3 16.437 20.31 6.19 1 33.85 0 C10 O6X 1001 AAA 1 
HETATM 30 C C9 O6X . . . C 3 15.416 20.71 5.34 1 37.56 0 C9 O6X 1001 AAA 1 
HETATM 31 N N11 O6X . . . C 3 16.165 20.096 7.504 1 39.57 0 N11 O6X 1001 AAA 1 
HETATM 32 O O12 O6X . . . C 3 13.285 20.004 9.818 1 51.94 0 O12 O6X 1001 AAA 1 
HETATM 33 F F1 O6X . . . C 3 15.002 18.458 11.151 1 49.95 0 F1 O6X 1001 AAA 1 
HETATM 34 F F3 O6X . . . C 3 14.701 17.66 9.169 1 48.87 0 F3 O6X 1001 AAA 1 
HETATM 35 F F4 O6X . . . C 3 16.549 18.662 9.636 1 54.17 0 F4 O6X 1001 AAA 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    20 
_model_server_stats.query_time_ms           291 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           35 
#