data_8AV1
#
_model_server_result.job_id            7np2melx3ah_KS0CPmj8FQ 
_model_server_result.datetime_utc      '2024-11-25 18:55:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8av1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":402}' 
#
_entry.id    8AV1 
#
_exptl.entry_id    8AV1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          98.17 
_cell.angle_gamma         90 
_cell.entry_id            8AV1 
_cell.length_a            67.196 
_cell.length_b            112.106 
_cell.length_c            67.32 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8AV1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C SER 190 A SER 215 1_555 A N PTR 191 A PTR 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? 
covale ? covale2 A C PTR 191 A PTR 216 1_555 A N ILE 192 A ILE 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale3 B C SER 190 B SER 215 1_555 B N PTR 191 B PTR 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? 
covale ? covale4 B C PTR 191 B PTR 216 1_555 B N ILE 192 B ILE 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     8AV1 
_atom_sites.fract_transf_matrix[1][1]    0.014882 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002137 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00892 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015007 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SO4 A 1 401 1 SO4 SO4 . 
D 3 EDO A 1 402 6 EDO EDO . 
E 3 EDO A 1 403 7 EDO EDO . 
F 3 EDO A 1 404 8 EDO EDO . 
G 3 EDO A 1 405 10 EDO EDO . 
H 4 O9L A 1 406 1 O9L YYY . 
I 2 SO4 B 1 401 2 SO4 SO4 . 
J 3 EDO B 1 402 9 EDO EDO . 
K 3 EDO B 1 403 11 EDO EDO . 
L 3 EDO B 1 404 12 EDO EDO . 
M 4 O9L B 1 405 2 O9L YYY . 
N 5 HOH A 1 501 233 HOH HOH . 
N 5 HOH A 2 502 125 HOH HOH . 
N 5 HOH A 3 503 215 HOH HOH . 
N 5 HOH A 4 504 211 HOH HOH . 
N 5 HOH A 5 505 104 HOH HOH . 
N 5 HOH A 6 506 243 HOH HOH . 
N 5 HOH A 7 507 244 HOH HOH . 
N 5 HOH A 8 508 245 HOH HOH . 
N 5 HOH A 9 509 139 HOH HOH . 
N 5 HOH A 10 510 136 HOH HOH . 
N 5 HOH A 11 511 112 HOH HOH . 
N 5 HOH A 12 512 149 HOH HOH . 
N 5 HOH A 13 513 238 HOH HOH . 
N 5 HOH A 14 514 142 HOH HOH . 
N 5 HOH A 15 515 101 HOH HOH . 
N 5 HOH A 16 516 118 HOH HOH . 
N 5 HOH A 17 517 247 HOH HOH . 
N 5 HOH A 18 518 236 HOH HOH . 
N 5 HOH A 19 519 172 HOH HOH . 
N 5 HOH A 20 520 191 HOH HOH . 
N 5 HOH A 21 521 109 HOH HOH . 
N 5 HOH A 22 522 184 HOH HOH . 
N 5 HOH A 23 523 193 HOH HOH . 
N 5 HOH A 24 524 138 HOH HOH . 
N 5 HOH A 25 525 226 HOH HOH . 
N 5 HOH A 26 526 134 HOH HOH . 
N 5 HOH A 27 527 105 HOH HOH . 
N 5 HOH A 28 528 228 HOH HOH . 
N 5 HOH A 29 529 235 HOH HOH . 
N 5 HOH A 30 530 216 HOH HOH . 
N 5 HOH A 31 531 146 HOH HOH . 
N 5 HOH A 32 532 229 HOH HOH . 
N 5 HOH A 33 533 148 HOH HOH . 
N 5 HOH A 34 534 161 HOH HOH . 
N 5 HOH A 35 535 129 HOH HOH . 
N 5 HOH A 36 536 246 HOH HOH . 
N 5 HOH A 37 537 141 HOH HOH . 
N 5 HOH A 38 538 210 HOH HOH . 
N 5 HOH A 39 539 224 HOH HOH . 
N 5 HOH A 40 540 234 HOH HOH . 
N 5 HOH A 41 541 217 HOH HOH . 
N 5 HOH A 42 542 164 HOH HOH . 
N 5 HOH A 43 543 160 HOH HOH . 
N 5 HOH A 44 544 266 HOH HOH . 
N 5 HOH A 45 545 183 HOH HOH . 
N 5 HOH A 46 546 213 HOH HOH . 
N 5 HOH A 47 547 120 HOH HOH . 
N 5 HOH A 48 548 111 HOH HOH . 
N 5 HOH A 49 549 232 HOH HOH . 
N 5 HOH A 50 550 223 HOH HOH . 
N 5 HOH A 51 551 168 HOH HOH . 
N 5 HOH A 52 552 108 HOH HOH . 
N 5 HOH A 53 553 167 HOH HOH . 
N 5 HOH A 54 554 153 HOH HOH . 
N 5 HOH A 55 555 135 HOH HOH . 
N 5 HOH A 56 556 208 HOH HOH . 
N 5 HOH A 57 557 156 HOH HOH . 
N 5 HOH A 58 558 152 HOH HOH . 
N 5 HOH A 59 559 163 HOH HOH . 
N 5 HOH A 60 560 122 HOH HOH . 
N 5 HOH A 61 561 196 HOH HOH . 
N 5 HOH A 62 562 103 HOH HOH . 
N 5 HOH A 63 563 133 HOH HOH . 
N 5 HOH A 64 564 242 HOH HOH . 
N 5 HOH A 65 565 241 HOH HOH . 
N 5 HOH A 66 566 154 HOH HOH . 
N 5 HOH A 67 567 126 HOH HOH . 
N 5 HOH A 68 568 115 HOH HOH . 
O 5 HOH B 1 501 231 HOH HOH . 
O 5 HOH B 2 502 250 HOH HOH . 
O 5 HOH B 3 503 176 HOH HOH . 
O 5 HOH B 4 504 205 HOH HOH . 
O 5 HOH B 5 505 131 HOH HOH . 
O 5 HOH B 6 506 165 HOH HOH . 
O 5 HOH B 7 507 194 HOH HOH . 
O 5 HOH B 8 508 221 HOH HOH . 
O 5 HOH B 9 509 263 HOH HOH . 
O 5 HOH B 10 510 237 HOH HOH . 
O 5 HOH B 11 511 169 HOH HOH . 
O 5 HOH B 12 512 206 HOH HOH . 
O 5 HOH B 13 513 257 HOH HOH . 
O 5 HOH B 14 514 200 HOH HOH . 
O 5 HOH B 15 515 140 HOH HOH . 
O 5 HOH B 16 516 252 HOH HOH . 
O 5 HOH B 17 517 155 HOH HOH . 
O 5 HOH B 18 518 130 HOH HOH . 
O 5 HOH B 19 519 253 HOH HOH . 
O 5 HOH B 20 520 256 HOH HOH . 
O 5 HOH B 21 521 249 HOH HOH . 
O 5 HOH B 22 522 151 HOH HOH . 
O 5 HOH B 23 523 255 HOH HOH . 
O 5 HOH B 24 524 175 HOH HOH . 
O 5 HOH B 25 525 177 HOH HOH . 
O 5 HOH B 26 526 171 HOH HOH . 
O 5 HOH B 27 527 185 HOH HOH . 
O 5 HOH B 28 528 265 HOH HOH . 
O 5 HOH B 29 529 116 HOH HOH . 
O 5 HOH B 30 530 261 HOH HOH . 
O 5 HOH B 31 531 262 HOH HOH . 
O 5 HOH B 32 532 219 HOH HOH . 
O 5 HOH B 33 533 197 HOH HOH . 
O 5 HOH B 34 534 144 HOH HOH . 
O 5 HOH B 35 535 166 HOH HOH . 
O 5 HOH B 36 536 248 HOH HOH . 
O 5 HOH B 37 537 201 HOH HOH . 
O 5 HOH B 38 538 207 HOH HOH . 
O 5 HOH B 39 539 230 HOH HOH . 
O 5 HOH B 40 540 106 HOH HOH . 
O 5 HOH B 41 541 147 HOH HOH . 
O 5 HOH B 42 542 251 HOH HOH . 
O 5 HOH B 43 543 159 HOH HOH . 
O 5 HOH B 44 544 254 HOH HOH . 
O 5 HOH B 45 545 128 HOH HOH . 
O 5 HOH B 46 546 137 HOH HOH . 
O 5 HOH B 47 547 110 HOH HOH . 
O 5 HOH B 48 548 117 HOH HOH . 
O 5 HOH B 49 549 225 HOH HOH . 
O 5 HOH B 50 550 198 HOH HOH . 
O 5 HOH B 51 551 187 HOH HOH . 
O 5 HOH B 52 552 192 HOH HOH . 
O 5 HOH B 53 553 143 HOH HOH . 
O 5 HOH B 54 554 260 HOH HOH . 
O 5 HOH B 55 555 162 HOH HOH . 
O 5 HOH B 56 556 158 HOH HOH . 
O 5 HOH B 57 557 190 HOH HOH . 
O 5 HOH B 58 558 157 HOH HOH . 
O 5 HOH B 59 559 195 HOH HOH . 
O 5 HOH B 60 560 258 HOH HOH . 
O 5 HOH B 61 561 132 HOH HOH . 
O 5 HOH B 62 562 178 HOH HOH . 
O 5 HOH B 63 563 121 HOH HOH . 
O 5 HOH B 64 564 214 HOH HOH . 
O 5 HOH B 65 565 181 HOH HOH . 
O 5 HOH B 66 566 259 HOH HOH . 
O 5 HOH B 67 567 240 HOH HOH . 
O 5 HOH B 68 568 102 HOH HOH . 
O 5 HOH B 69 569 218 HOH HOH . 
O 5 HOH B 70 570 174 HOH HOH . 
O 5 HOH B 71 571 264 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . J 3 33.849 -1.061 10.262 1 46.86 ? C1 EDO 402 B 1 
HETATM 2 O O1 EDO . . . J 3 32.693 -1.302 11.058 1 42.08 ? O1 EDO 402 B 1 
HETATM 3 C C2 EDO . . . J 3 35.068 -1.76 10.752 1 47.78 ? C2 EDO 402 B 1 
HETATM 4 O O2 EDO . . . J 3 35.191 -1.744 12.175 1 55.36 ? O2 EDO 402 B 1 
#
_model_server_stats.io_time_ms              23 
_model_server_stats.parse_time_ms           34 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           258 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#