data_8AV1 # _model_server_result.job_id Lh6XHFZp_NsgVnae64LaLw _model_server_result.datetime_utc '2024-11-25 18:51:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8av1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":405}' # _entry.id 8AV1 # _exptl.entry_id 8AV1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 349.41 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-pyridin-3-yl-8-thiomorpholin-4-yl-[1,3]oxazolo[5,4-f]quinoxaline _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.17 _cell.angle_gamma 90 _cell.entry_id 8AV1 _cell.length_a 67.196 _cell.length_b 112.106 _cell.length_c 67.32 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8AV1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 H N N ? 4 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C SER 190 A SER 215 1_555 A N PTR 191 A PTR 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale2 A C PTR 191 A PTR 216 1_555 A N ILE 192 A ILE 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale3 B C SER 190 B SER 215 1_555 B N PTR 191 B PTR 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? covale ? covale4 B C PTR 191 B PTR 216 1_555 B N ILE 192 B ILE 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? # _chem_comp.formula 'C18 H15 N5 O S' _chem_comp.formula_weight 349.41 _chem_comp.id O9L _chem_comp.mon_nstd_flag . _chem_comp.name 2-pyridin-3-yl-8-thiomorpholin-4-yl-[1,3]oxazolo[5,4-f]quinoxaline _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 N O9L doub 246 n y C1 C O9L sing 247 n y N C2 O9L sing 248 n y C C17 O9L doub 249 n y C2 C3 O9L doub 250 n y C17 C3 O9L sing 251 n y C3 C4 O9L sing 252 n n C4 N1 O9L doub 253 n y C4 O O9L sing 254 n y N1 C5 O9L sing 255 n y O C16 O9L sing 256 n y C5 C16 O9L doub 257 n y C5 C6 O9L sing 258 n y C16 C15 O9L sing 259 n y C6 C7 O9L doub 260 n y C15 N4 O9L doub 261 n y C15 C8 O9L sing 262 n y N4 C10 O9L sing 263 n y C7 C8 O9L sing 264 n y C8 N2 O9L doub 265 n y C11 C12 O9L sing 266 n n C11 N3 O9L sing 267 n n C10 N3 O9L sing 268 n n C10 C9 O9L doub 269 n y C12 S O9L sing 270 n n N3 C14 O9L sing 271 n n N2 C9 O9L sing 272 n y C14 C13 O9L sing 273 n n S C13 O9L sing 274 n n C2 H1 O9L sing 275 n n C6 H2 O9L sing 276 n n C17 H3 O9L sing 277 n n C H4 O9L sing 278 n n C1 H5 O9L sing 279 n n C7 H6 O9L sing 280 n n C9 H7 O9L sing 281 n n C14 H8 O9L sing 282 n n C14 H9 O9L sing 283 n n C13 H10 O9L sing 284 n n C13 H11 O9L sing 285 n n C12 H12 O9L sing 286 n n C12 H13 O9L sing 287 n n C11 H14 O9L sing 288 n n C11 H15 O9L sing 289 n n # _atom_sites.entry_id 8AV1 _atom_sites.fract_transf_matrix[1][1] 0.014882 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002137 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00892 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015007 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 401 1 SO4 SO4 . D 3 EDO A 1 402 6 EDO EDO . E 3 EDO A 1 403 7 EDO EDO . F 3 EDO A 1 404 8 EDO EDO . G 3 EDO A 1 405 10 EDO EDO . H 4 O9L A 1 406 1 O9L YYY . I 2 SO4 B 1 401 2 SO4 SO4 . J 3 EDO B 1 402 9 EDO EDO . K 3 EDO B 1 403 11 EDO EDO . L 3 EDO B 1 404 12 EDO EDO . M 4 O9L B 1 405 2 O9L YYY . N 5 HOH A 1 501 233 HOH HOH . N 5 HOH A 2 502 125 HOH HOH . N 5 HOH A 3 503 215 HOH HOH . N 5 HOH A 4 504 211 HOH HOH . N 5 HOH A 5 505 104 HOH HOH . N 5 HOH A 6 506 243 HOH HOH . N 5 HOH A 7 507 244 HOH HOH . N 5 HOH A 8 508 245 HOH HOH . N 5 HOH A 9 509 139 HOH HOH . N 5 HOH A 10 510 136 HOH HOH . N 5 HOH A 11 511 112 HOH HOH . N 5 HOH A 12 512 149 HOH HOH . N 5 HOH A 13 513 238 HOH HOH . N 5 HOH A 14 514 142 HOH HOH . N 5 HOH A 15 515 101 HOH HOH . N 5 HOH A 16 516 118 HOH HOH . N 5 HOH A 17 517 247 HOH HOH . N 5 HOH A 18 518 236 HOH HOH . N 5 HOH A 19 519 172 HOH HOH . N 5 HOH A 20 520 191 HOH HOH . N 5 HOH A 21 521 109 HOH HOH . N 5 HOH A 22 522 184 HOH HOH . N 5 HOH A 23 523 193 HOH HOH . N 5 HOH A 24 524 138 HOH HOH . N 5 HOH A 25 525 226 HOH HOH . N 5 HOH A 26 526 134 HOH HOH . N 5 HOH A 27 527 105 HOH HOH . N 5 HOH A 28 528 228 HOH HOH . N 5 HOH A 29 529 235 HOH HOH . N 5 HOH A 30 530 216 HOH HOH . N 5 HOH A 31 531 146 HOH HOH . N 5 HOH A 32 532 229 HOH HOH . N 5 HOH A 33 533 148 HOH HOH . N 5 HOH A 34 534 161 HOH HOH . N 5 HOH A 35 535 129 HOH HOH . N 5 HOH A 36 536 246 HOH HOH . N 5 HOH A 37 537 141 HOH HOH . N 5 HOH A 38 538 210 HOH HOH . N 5 HOH A 39 539 224 HOH HOH . N 5 HOH A 40 540 234 HOH HOH . N 5 HOH A 41 541 217 HOH HOH . N 5 HOH A 42 542 164 HOH HOH . N 5 HOH A 43 543 160 HOH HOH . N 5 HOH A 44 544 266 HOH HOH . N 5 HOH A 45 545 183 HOH HOH . N 5 HOH A 46 546 213 HOH HOH . N 5 HOH A 47 547 120 HOH HOH . N 5 HOH A 48 548 111 HOH HOH . N 5 HOH A 49 549 232 HOH HOH . N 5 HOH A 50 550 223 HOH HOH . N 5 HOH A 51 551 168 HOH HOH . N 5 HOH A 52 552 108 HOH HOH . N 5 HOH A 53 553 167 HOH HOH . N 5 HOH A 54 554 153 HOH HOH . N 5 HOH A 55 555 135 HOH HOH . N 5 HOH A 56 556 208 HOH HOH . N 5 HOH A 57 557 156 HOH HOH . N 5 HOH A 58 558 152 HOH HOH . N 5 HOH A 59 559 163 HOH HOH . N 5 HOH A 60 560 122 HOH HOH . N 5 HOH A 61 561 196 HOH HOH . N 5 HOH A 62 562 103 HOH HOH . N 5 HOH A 63 563 133 HOH HOH . N 5 HOH A 64 564 242 HOH HOH . N 5 HOH A 65 565 241 HOH HOH . N 5 HOH A 66 566 154 HOH HOH . N 5 HOH A 67 567 126 HOH HOH . N 5 HOH A 68 568 115 HOH HOH . O 5 HOH B 1 501 231 HOH HOH . O 5 HOH B 2 502 250 HOH HOH . O 5 HOH B 3 503 176 HOH HOH . O 5 HOH B 4 504 205 HOH HOH . O 5 HOH B 5 505 131 HOH HOH . O 5 HOH B 6 506 165 HOH HOH . O 5 HOH B 7 507 194 HOH HOH . O 5 HOH B 8 508 221 HOH HOH . O 5 HOH B 9 509 263 HOH HOH . O 5 HOH B 10 510 237 HOH HOH . O 5 HOH B 11 511 169 HOH HOH . O 5 HOH B 12 512 206 HOH HOH . O 5 HOH B 13 513 257 HOH HOH . O 5 HOH B 14 514 200 HOH HOH . O 5 HOH B 15 515 140 HOH HOH . O 5 HOH B 16 516 252 HOH HOH . O 5 HOH B 17 517 155 HOH HOH . O 5 HOH B 18 518 130 HOH HOH . O 5 HOH B 19 519 253 HOH HOH . O 5 HOH B 20 520 256 HOH HOH . O 5 HOH B 21 521 249 HOH HOH . O 5 HOH B 22 522 151 HOH HOH . O 5 HOH B 23 523 255 HOH HOH . O 5 HOH B 24 524 175 HOH HOH . O 5 HOH B 25 525 177 HOH HOH . O 5 HOH B 26 526 171 HOH HOH . O 5 HOH B 27 527 185 HOH HOH . O 5 HOH B 28 528 265 HOH HOH . O 5 HOH B 29 529 116 HOH HOH . O 5 HOH B 30 530 261 HOH HOH . O 5 HOH B 31 531 262 HOH HOH . O 5 HOH B 32 532 219 HOH HOH . O 5 HOH B 33 533 197 HOH HOH . O 5 HOH B 34 534 144 HOH HOH . O 5 HOH B 35 535 166 HOH HOH . O 5 HOH B 36 536 248 HOH HOH . O 5 HOH B 37 537 201 HOH HOH . O 5 HOH B 38 538 207 HOH HOH . O 5 HOH B 39 539 230 HOH HOH . O 5 HOH B 40 540 106 HOH HOH . O 5 HOH B 41 541 147 HOH HOH . O 5 HOH B 42 542 251 HOH HOH . O 5 HOH B 43 543 159 HOH HOH . O 5 HOH B 44 544 254 HOH HOH . O 5 HOH B 45 545 128 HOH HOH . O 5 HOH B 46 546 137 HOH HOH . O 5 HOH B 47 547 110 HOH HOH . O 5 HOH B 48 548 117 HOH HOH . O 5 HOH B 49 549 225 HOH HOH . O 5 HOH B 50 550 198 HOH HOH . O 5 HOH B 51 551 187 HOH HOH . O 5 HOH B 52 552 192 HOH HOH . O 5 HOH B 53 553 143 HOH HOH . O 5 HOH B 54 554 260 HOH HOH . O 5 HOH B 55 555 162 HOH HOH . O 5 HOH B 56 556 158 HOH HOH . O 5 HOH B 57 557 190 HOH HOH . O 5 HOH B 58 558 157 HOH HOH . O 5 HOH B 59 559 195 HOH HOH . O 5 HOH B 60 560 258 HOH HOH . O 5 HOH B 61 561 132 HOH HOH . O 5 HOH B 62 562 178 HOH HOH . O 5 HOH B 63 563 121 HOH HOH . O 5 HOH B 64 564 214 HOH HOH . O 5 HOH B 65 565 181 HOH HOH . O 5 HOH B 66 566 259 HOH HOH . O 5 HOH B 67 567 240 HOH HOH . O 5 HOH B 68 568 102 HOH HOH . O 5 HOH B 69 569 218 HOH HOH . O 5 HOH B 70 570 174 HOH HOH . O 5 HOH B 71 571 264 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 O9L . . . M 4 33.75 -0.832 5.276 1 38.66 ? N1 O9L 405 B 1 HETATM 2 C C2 O9L . . . M 4 30.934 -0.524 6.257 1 38.18 ? C2 O9L 405 B 1 HETATM 3 N N3 O9L . . . M 4 38.117 -4.937 8.774 1 41.26 ? N3 O9L 405 B 1 HETATM 4 C C4 O9L . . . M 4 33.224 -1.487 6.261 1 37.17 ? C4 O9L 405 B 1 HETATM 5 N N4 O9L . . . M 4 36.743 -3.509 7.59 1 41.09 ? N4 O9L 405 B 1 HETATM 6 C C5 O9L . . . M 4 35.084 -1.199 5.293 1 36.6 ? C5 O9L 405 B 1 HETATM 7 C C6 O9L . . . M 4 36.139 -0.858 4.444 1 36.94 ? C6 O9L 405 B 1 HETATM 8 C C17 O9L . . . M 4 31.452 -2.226 7.828 1 35.19 ? C17 O9L 405 B 1 HETATM 9 C C O9L . . . M 4 30.145 -2.171 8.271 1 34.96 ? C O9L 405 B 1 HETATM 10 C C3 O9L . . . M 4 31.865 -1.407 6.788 1 36.65 ? C3 O9L 405 B 1 HETATM 11 N N O9L . . . M 4 29.663 -0.438 6.682 1 35.94 ? N O9L 405 B 1 HETATM 12 C C1 O9L . . . M 4 29.287 -1.269 7.671 1 36.45 ? C1 O9L 405 B 1 HETATM 13 O O O9L . . . M 4 34.087 -2.284 6.955 1 36.34 ? O O9L 405 B 1 HETATM 14 C C16 O9L . . . M 4 35.286 -2.084 6.332 1 37.19 ? C16 O9L 405 B 1 HETATM 15 C C15 O9L . . . M 4 36.555 -2.649 6.563 1 38 ? C15 O9L 405 B 1 HETATM 16 C C8 O9L . . . M 4 37.608 -2.313 5.704 1 39.05 ? C8 O9L 405 B 1 HETATM 17 C C7 O9L . . . M 4 37.381 -1.398 4.647 1 36.09 ? C7 O9L 405 B 1 HETATM 18 C C10 O9L . . . M 4 37.953 -4.025 7.752 1 38.94 ? C10 O9L 405 B 1 HETATM 19 C C9 O9L . . . M 4 39.018 -3.676 6.869 1 39.52 ? C9 O9L 405 B 1 HETATM 20 N N2 O9L . . . M 4 38.851 -2.847 5.862 1 39 ? N2 O9L 405 B 1 HETATM 21 C C14 O9L . . . M 4 37.221 -4.96 9.933 1 44.09 ? C14 O9L 405 B 1 HETATM 22 C C13 O9L . . . M 4 37.652 -3.959 10.983 1 44.05 ? C13 O9L 405 B 1 HETATM 23 S S O9L . . . M 4 39.301 -4.311 11.635 1 42.05 ? S O9L 405 B 1 HETATM 24 C C12 O9L . . . M 4 40.158 -4.509 10.061 1 42.2 ? C12 O9L 405 B 1 HETATM 25 C C11 O9L . . . M 4 39.441 -5.451 9.134 1 41.66 ? C11 O9L 405 B 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 25 #