data_8AWB
#
_model_server_result.job_id            sVh8_WsCZzH-GxQqplH0xQ 
_model_server_result.datetime_utc      '2024-11-17 13:37:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8awb 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":402}' 
#
_entry.id    8AWB 
#
_exptl.entry_id    8AWB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8AWB 
_cell.length_a            93.839 
_cell.length_b            99.357 
_cell.length_c            102.256 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8AWB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    'I 2 2' 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3,4 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_545 -x,-y-1,z -1 0 0 0 -1 0 0 0 1 0 -99.357 0 
3 'crystal symmetry operation' 3_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 
4 'crystal symmetry operation' 4_545 x,-y-1,-z 1 0 0 0 -1 0 0 0 -1 0 -99.357 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE2 GLU 181 A GLU 181 1_555 B MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.978 ? 
metalc ? metalc2 A OE1 GLU 217 A GLU 217 1_555 B MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? 
metalc ? metalc3 A OE2 GLU 217 A GLU 217 1_555 D MN MN . A MN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? 
metalc ? metalc4 A NE2 HIS 220 A HIS 220 1_555 D MN MN . A MN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.484 ? 
metalc ? metalc5 A OD2 ASP 245 A ASP 245 1_555 B MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? 
metalc ? metalc6 A OD1 ASP 255 A ASP 255 1_555 D MN MN . A MN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.462 ? 
metalc ? metalc7 A OD2 ASP 255 A ASP 255 1_555 D MN MN . A MN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? 
metalc ? metalc8 A OD1 ASP 257 A ASP 257 1_555 D MN MN . A MN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? 
metalc ? metalc9 A OD2 ASP 287 A ASP 287 1_555 B MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.939 ? 
metalc ? metalc10 B MG MG . A MG 401 1_555 C O2 GOL . A GOL 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? 
metalc ? metalc11 D MN MN . A MN 403 1_555 E O HOH . A HOH 654 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     8AWB 
_atom_sites.fract_transf_matrix[1][1]    0.010657 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010065 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009779 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MG A 1 401 401 MG MG . 
C 3 GOL A 1 402 501 GOL GOL . 
D 4 MN A 1 403 1 MN MN . 
E 5 HOH A 1 501 48 HOH HOH . 
E 5 HOH A 2 502 215 HOH HOH . 
E 5 HOH A 3 503 26 HOH HOH . 
E 5 HOH A 4 504 177 HOH HOH . 
E 5 HOH A 5 505 65 HOH HOH . 
E 5 HOH A 6 506 194 HOH HOH . 
E 5 HOH A 7 507 105 HOH HOH . 
E 5 HOH A 8 508 158 HOH HOH . 
E 5 HOH A 9 509 56 HOH HOH . 
E 5 HOH A 10 510 169 HOH HOH . 
E 5 HOH A 11 511 57 HOH HOH . 
E 5 HOH A 12 512 189 HOH HOH . 
E 5 HOH A 13 513 42 HOH HOH . 
E 5 HOH A 14 514 77 HOH HOH . 
E 5 HOH A 15 515 119 HOH HOH . 
E 5 HOH A 16 516 207 HOH HOH . 
E 5 HOH A 17 517 222 HOH HOH . 
E 5 HOH A 18 518 88 HOH HOH . 
E 5 HOH A 19 519 64 HOH HOH . 
E 5 HOH A 20 520 141 HOH HOH . 
E 5 HOH A 21 521 138 HOH HOH . 
E 5 HOH A 22 522 111 HOH HOH . 
E 5 HOH A 23 523 78 HOH HOH . 
E 5 HOH A 24 524 22 HOH HOH . 
E 5 HOH A 25 525 196 HOH HOH . 
E 5 HOH A 26 526 93 HOH HOH . 
E 5 HOH A 27 527 140 HOH HOH . 
E 5 HOH A 28 528 205 HOH HOH . 
E 5 HOH A 29 529 122 HOH HOH . 
E 5 HOH A 30 530 66 HOH HOH . 
E 5 HOH A 31 531 54 HOH HOH . 
E 5 HOH A 32 532 28 HOH HOH . 
E 5 HOH A 33 533 145 HOH HOH . 
E 5 HOH A 34 534 45 HOH HOH . 
E 5 HOH A 35 535 90 HOH HOH . 
E 5 HOH A 36 536 151 HOH HOH . 
E 5 HOH A 37 537 142 HOH HOH . 
E 5 HOH A 38 538 178 HOH HOH . 
E 5 HOH A 39 539 3 HOH HOH . 
E 5 HOH A 40 540 118 HOH HOH . 
E 5 HOH A 41 541 74 HOH HOH . 
E 5 HOH A 42 542 35 HOH HOH . 
E 5 HOH A 43 543 29 HOH HOH . 
E 5 HOH A 44 544 25 HOH HOH . 
E 5 HOH A 45 545 154 HOH HOH . 
E 5 HOH A 46 546 60 HOH HOH . 
E 5 HOH A 47 547 79 HOH HOH . 
E 5 HOH A 48 548 33 HOH HOH . 
E 5 HOH A 49 549 6 HOH HOH . 
E 5 HOH A 50 550 16 HOH HOH . 
E 5 HOH A 51 551 5 HOH HOH . 
E 5 HOH A 52 552 104 HOH HOH . 
E 5 HOH A 53 553 121 HOH HOH . 
E 5 HOH A 54 554 13 HOH HOH . 
E 5 HOH A 55 555 99 HOH HOH . 
E 5 HOH A 56 556 17 HOH HOH . 
E 5 HOH A 57 557 132 HOH HOH . 
E 5 HOH A 58 558 84 HOH HOH . 
E 5 HOH A 59 559 94 HOH HOH . 
E 5 HOH A 60 560 95 HOH HOH . 
E 5 HOH A 61 561 114 HOH HOH . 
E 5 HOH A 62 562 81 HOH HOH . 
E 5 HOH A 63 563 113 HOH HOH . 
E 5 HOH A 64 564 83 HOH HOH . 
E 5 HOH A 65 565 136 HOH HOH . 
E 5 HOH A 66 566 55 HOH HOH . 
E 5 HOH A 67 567 100 HOH HOH . 
E 5 HOH A 68 568 149 HOH HOH . 
E 5 HOH A 69 569 129 HOH HOH . 
E 5 HOH A 70 570 211 HOH HOH . 
E 5 HOH A 71 571 133 HOH HOH . 
E 5 HOH A 72 572 72 HOH HOH . 
E 5 HOH A 73 573 10 HOH HOH . 
E 5 HOH A 74 574 21 HOH HOH . 
E 5 HOH A 75 575 198 HOH HOH . 
E 5 HOH A 76 576 162 HOH HOH . 
E 5 HOH A 77 577 34 HOH HOH . 
E 5 HOH A 78 578 75 HOH HOH . 
E 5 HOH A 79 579 1 HOH HOH . 
E 5 HOH A 80 580 32 HOH HOH . 
E 5 HOH A 81 581 197 HOH HOH . 
E 5 HOH A 82 582 14 HOH HOH . 
E 5 HOH A 83 583 19 HOH HOH . 
E 5 HOH A 84 584 117 HOH HOH . 
E 5 HOH A 85 585 219 HOH HOH . 
E 5 HOH A 86 586 156 HOH HOH . 
E 5 HOH A 87 587 87 HOH HOH . 
E 5 HOH A 88 588 12 HOH HOH . 
E 5 HOH A 89 589 96 HOH HOH . 
E 5 HOH A 90 590 39 HOH HOH . 
E 5 HOH A 91 591 144 HOH HOH . 
E 5 HOH A 92 592 188 HOH HOH . 
E 5 HOH A 93 593 70 HOH HOH . 
E 5 HOH A 94 594 18 HOH HOH . 
E 5 HOH A 95 595 143 HOH HOH . 
E 5 HOH A 96 596 69 HOH HOH . 
E 5 HOH A 97 597 107 HOH HOH . 
E 5 HOH A 98 598 135 HOH HOH . 
E 5 HOH A 99 599 31 HOH HOH . 
E 5 HOH A 100 600 212 HOH HOH . 
E 5 HOH A 101 601 53 HOH HOH . 
E 5 HOH A 102 602 36 HOH HOH . 
E 5 HOH A 103 603 50 HOH HOH . 
E 5 HOH A 104 604 89 HOH HOH . 
E 5 HOH A 105 605 192 HOH HOH . 
E 5 HOH A 106 606 7 HOH HOH . 
E 5 HOH A 107 607 213 HOH HOH . 
E 5 HOH A 108 608 2 HOH HOH . 
E 5 HOH A 109 609 179 HOH HOH . 
E 5 HOH A 110 610 186 HOH HOH . 
E 5 HOH A 111 611 8 HOH HOH . 
E 5 HOH A 112 612 139 HOH HOH . 
E 5 HOH A 113 613 155 HOH HOH . 
E 5 HOH A 114 614 51 HOH HOH . 
E 5 HOH A 115 615 30 HOH HOH . 
E 5 HOH A 116 616 137 HOH HOH . 
E 5 HOH A 117 617 40 HOH HOH . 
E 5 HOH A 118 618 128 HOH HOH . 
E 5 HOH A 119 619 76 HOH HOH . 
E 5 HOH A 120 620 37 HOH HOH . 
E 5 HOH A 121 621 43 HOH HOH . 
E 5 HOH A 122 622 101 HOH HOH . 
E 5 HOH A 123 623 73 HOH HOH . 
E 5 HOH A 124 624 131 HOH HOH . 
E 5 HOH A 125 625 200 HOH HOH . 
E 5 HOH A 126 626 27 HOH HOH . 
E 5 HOH A 127 627 23 HOH HOH . 
E 5 HOH A 128 628 68 HOH HOH . 
E 5 HOH A 129 629 201 HOH HOH . 
E 5 HOH A 130 630 123 HOH HOH . 
E 5 HOH A 131 631 176 HOH HOH . 
E 5 HOH A 132 632 191 HOH HOH . 
E 5 HOH A 133 633 166 HOH HOH . 
E 5 HOH A 134 634 195 HOH HOH . 
E 5 HOH A 135 635 86 HOH HOH . 
E 5 HOH A 136 636 124 HOH HOH . 
E 5 HOH A 137 637 58 HOH HOH . 
E 5 HOH A 138 638 165 HOH HOH . 
E 5 HOH A 139 639 41 HOH HOH . 
E 5 HOH A 140 640 67 HOH HOH . 
E 5 HOH A 141 641 148 HOH HOH . 
E 5 HOH A 142 642 82 HOH HOH . 
E 5 HOH A 143 643 4 HOH HOH . 
E 5 HOH A 144 644 172 HOH HOH . 
E 5 HOH A 145 645 47 HOH HOH . 
E 5 HOH A 146 646 46 HOH HOH . 
E 5 HOH A 147 647 157 HOH HOH . 
E 5 HOH A 148 648 193 HOH HOH . 
E 5 HOH A 149 649 146 HOH HOH . 
E 5 HOH A 150 650 181 HOH HOH . 
E 5 HOH A 151 651 49 HOH HOH . 
E 5 HOH A 152 652 182 HOH HOH . 
E 5 HOH A 153 653 97 HOH HOH . 
E 5 HOH A 154 654 224 HOH HOH . 
E 5 HOH A 155 655 161 HOH HOH . 
E 5 HOH A 156 656 147 HOH HOH . 
E 5 HOH A 157 657 9 HOH HOH . 
E 5 HOH A 158 658 163 HOH HOH . 
E 5 HOH A 159 659 20 HOH HOH . 
E 5 HOH A 160 660 108 HOH HOH . 
E 5 HOH A 161 661 127 HOH HOH . 
E 5 HOH A 162 662 63 HOH HOH . 
E 5 HOH A 163 663 85 HOH HOH . 
E 5 HOH A 164 664 167 HOH HOH . 
E 5 HOH A 165 665 112 HOH HOH . 
E 5 HOH A 166 666 185 HOH HOH . 
E 5 HOH A 167 667 164 HOH HOH . 
E 5 HOH A 168 668 220 HOH HOH . 
E 5 HOH A 169 669 80 HOH HOH . 
E 5 HOH A 170 670 168 HOH HOH . 
E 5 HOH A 171 671 59 HOH HOH . 
E 5 HOH A 172 672 202 HOH HOH . 
E 5 HOH A 173 673 62 HOH HOH . 
E 5 HOH A 174 674 71 HOH HOH . 
E 5 HOH A 175 675 203 HOH HOH . 
E 5 HOH A 176 676 61 HOH HOH . 
E 5 HOH A 177 677 24 HOH HOH . 
E 5 HOH A 178 678 52 HOH HOH . 
E 5 HOH A 179 679 120 HOH HOH . 
E 5 HOH A 180 680 15 HOH HOH . 
E 5 HOH A 181 681 98 HOH HOH . 
E 5 HOH A 182 682 91 HOH HOH . 
E 5 HOH A 183 683 218 HOH HOH . 
E 5 HOH A 184 684 126 HOH HOH . 
E 5 HOH A 185 685 190 HOH HOH . 
E 5 HOH A 186 686 217 HOH HOH . 
E 5 HOH A 187 687 223 HOH HOH . 
E 5 HOH A 188 688 102 HOH HOH . 
E 5 HOH A 189 689 214 HOH HOH . 
E 5 HOH A 190 690 110 HOH HOH . 
E 5 HOH A 191 691 115 HOH HOH . 
E 5 HOH A 192 692 204 HOH HOH . 
E 5 HOH A 193 693 173 HOH HOH . 
E 5 HOH A 194 694 159 HOH HOH . 
E 5 HOH A 195 695 38 HOH HOH . 
E 5 HOH A 196 696 125 HOH HOH . 
E 5 HOH A 197 697 116 HOH HOH . 
E 5 HOH A 198 698 160 HOH HOH . 
E 5 HOH A 199 699 171 HOH HOH . 
E 5 HOH A 200 700 11 HOH HOH . 
E 5 HOH A 201 701 187 HOH HOH . 
E 5 HOH A 202 702 225 HOH HOH . 
E 5 HOH A 203 703 206 HOH HOH . 
E 5 HOH A 204 704 216 HOH HOH . 
E 5 HOH A 205 705 150 HOH HOH . 
E 5 HOH A 206 706 106 HOH HOH . 
E 5 HOH A 207 707 210 HOH HOH . 
E 5 HOH A 208 708 221 HOH HOH . 
E 5 HOH A 209 709 199 HOH HOH . 
E 5 HOH A 210 710 180 HOH HOH . 
E 5 HOH A 211 711 209 HOH HOH . 
E 5 HOH A 212 712 134 HOH HOH . 
E 5 HOH A 213 713 103 HOH HOH . 
E 5 HOH A 214 714 170 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . C 3 -11.938 -31.435 -6.358 0.68 9.2 ? C1 GOL 402 A 1 
HETATM 2 O O1 GOL . . . C 3 -10.77 -32.183 -6.479 0.68 9.11 ? O1 GOL 402 A 1 
HETATM 3 C C2 GOL . . . C 3 -13.111 -32.438 -6.369 0.68 6.75 ? C2 GOL 402 A 1 
HETATM 4 O O2 GOL . . . C 3 -13.07 -33.277 -7.474 0.68 7.56 ? O2 GOL 402 A 1 
HETATM 5 C C3 GOL . . . C 3 -14.378 -31.56 -6.346 0.68 6.23 ? C3 GOL 402 A 1 
HETATM 6 O O3 GOL . . . C 3 -14.345 -30.858 -5.144 0.68 7.69 ? O3 GOL 402 A 1 
#
_model_server_stats.io_time_ms              55 
_model_server_stats.parse_time_ms           19 
_model_server_stats.create_model_time_ms    20 
_model_server_stats.query_time_ms           307 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           6 
#