data_8AYO # _model_server_result.job_id Z68JHikZi8dIuqTchSgpyQ _model_server_result.datetime_utc '2024-11-05 00:29:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ayo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":901}' # _entry.id 8AYO # _exptl.entry_id 8AYO _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 147.129 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'GLUTAMIC ACID' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8AYO _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8AYO _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 M N N ? 4 P N N ? 4 DA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 740 A CYS 714 1_555 A SG CYS 795 A CYS 769 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf2 B SG CYS 739 D CYS 718 1_555 B SG CYS 794 D CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf3 C SG CYS 740 C CYS 714 1_555 C SG CYS 795 C CYS 769 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf4 D SG CYS 52 I CYS 52 1_555 D SG CYS 91 I CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf5 D SG CYS 90 I CYS 90 1_555 D SG CYS 100 I CYS 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf6 E SG CYS 52 J CYS 52 1_555 E SG CYS 91 J CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf7 E SG CYS 90 J CYS 90 1_555 E SG CYS 100 J CYS 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf8 F SG CYS 739 B CYS 718 1_555 F SG CYS 794 B CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? # _chem_comp.formula 'C5 H9 N O4' _chem_comp.formula_weight 147.129 _chem_comp.id GLU _chem_comp.mon_nstd_flag y _chem_comp.name 'GLUTAMIC ACID' _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8AYO _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 GLU A 1 901 1327 GLU GLU . H 5 CYZ A 1 902 1331 CYZ CYZ . I 6 OLC A 1 903 1501 OLC OLC . J 7 PLM A 1 904 1601 PLM PLM . K 7 PLM A 1 905 1701 PLM PLM . L 8 POV A 1 906 1901 POV POV . M 4 GLU D 1 901 1327 GLU GLU . N 5 CYZ D 1 902 1331 CYZ CYZ . O 6 OLC D 1 903 1501 OLC OLC . P 4 GLU C 1 901 1327 GLU GLU . Q 5 CYZ C 1 902 1331 CYZ CYZ . R 6 OLC C 1 903 1501 OLC OLC . S 7 PLM C 1 904 1601 PLM PLM . T 7 PLM C 1 905 1701 PLM PLM . U 8 POV C 1 906 1901 POV POV . V 7 PLM I 1 1801 1801 PLM PLM . W 9 OIJ I 1 1802 301 OIJ L01 . X 7 PLM I 1 1803 1601 PLM PLM . Y 7 PLM I 1 1804 1701 PLM PLM . Z 7 PLM J 1 1801 1801 PLM PLM . AA 7 PLM J 1 1802 1601 PLM PLM . BA 7 PLM J 1 1803 1701 PLM PLM . CA 9 OIJ J 1 1804 301 OIJ L01 . DA 4 GLU B 1 901 1327 GLU GLU . EA 5 CYZ B 1 902 1331 CYZ CYZ . FA 6 OLC B 1 903 1501 OLC OLC . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N GLU . . . P 4 141.108 167.542 197.601 1 58.86 ? N GLU 901 C 1 HETATM 2 C CA GLU . . . P 4 142.358 167.822 198.294 1 58.86 ? CA GLU 901 C 1 HETATM 3 C C GLU . . . P 4 142.244 167.494 199.778 1 58.86 ? C GLU 901 C 1 HETATM 4 O O GLU . . . P 4 141.479 166.619 200.177 1 58.86 ? O GLU 901 C 1 HETATM 5 C CB GLU . . . P 4 142.758 169.285 198.111 1 58.86 ? CB GLU 901 C 1 HETATM 6 C CG GLU . . . P 4 143.38 169.601 196.762 1 58.86 ? CG GLU 901 C 1 HETATM 7 C CD GLU . . . P 4 144.465 170.661 196.841 1 58.86 ? CD GLU 901 C 1 HETATM 8 O OE1 GLU . . . P 4 144.821 171.228 195.788 1 58.86 ? OE1 GLU 901 C 1 HETATM 9 O OE2 GLU . . . P 4 144.964 170.929 197.953 1 58.86 ? OE2 GLU 901 C 1 HETATM 10 O OXT GLU . . . P 4 142.913 168.102 200.616 1 58.86 ? OXT GLU 901 C 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 35 _model_server_stats.query_time_ms 366 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #