data_8AYO
#
_model_server_result.job_id            L5LWNPtj8XFBbIg_-jrZsg 
_model_server_result.datetime_utc      '2025-08-31 22:38:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8ayo 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"R","auth_seq_id":903}' 
#
_entry.id    8AYO 
#
_exptl.entry_id    8AYO 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              356.54 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8AYO 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8AYO 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 I N N 
? 6 O N N 
? 6 R N N 
? 6 FA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 740 A CYS 714 1_555 A SG CYS 795 A CYS 769 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf2 B SG CYS 739 D CYS 718 1_555 B SG CYS 794 D CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf3 C SG CYS 740 C CYS 714 1_555 C SG CYS 795 C CYS 769 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf4 D SG CYS 52 I CYS 52 1_555 D SG CYS 91 I CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf5 D SG CYS 90 I CYS 90 1_555 D SG CYS 100 I CYS 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf6 E SG CYS 52 J CYS 52 1_555 E SG CYS 91 J CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf7 E SG CYS 90 J CYS 90 1_555 E SG CYS 100 J CYS 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf8 F SG CYS 739 B CYS 718 1_555 F SG CYS 794 B CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
#
_chem_comp.formula           'C21 H40 O4' 
_chem_comp.formula_weight    356.54 
_chem_comp.id                OLC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     1-Oleoyl-R-glycerol 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C18 C17 OLC sing 338 n n 
C10 C9 OLC doub 339 n n 
C10 C11 OLC sing 340 n n 
C9 C8 OLC sing 341 n n 
C17 C16 OLC sing 342 z n 
C11 C12 OLC sing 343 n n 
C8 C7 OLC sing 344 n n 
C24 C22 OLC sing 345 n n 
C24 O25 OLC sing 346 n n 
C16 C15 OLC sing 347 n n 
C12 C13 OLC sing 348 n n 
C7 C6 OLC sing 349 n n 
C15 C14 OLC sing 350 n n 
C13 C14 OLC sing 351 n n 
C6 C5 OLC sing 352 n n 
C5 C4 OLC sing 353 n n 
C4 C3 OLC sing 354 n n 
C3 C2 OLC sing 355 n n 
C2 C1 OLC sing 356 n n 
C21 C22 OLC sing 357 n n 
C21 O20 OLC sing 358 n n 
C1 O19 OLC doub 359 n n 
C1 O20 OLC sing 360 n n 
C22 O23 OLC sing 361 n n 
C18 H18 OLC sing 362 n n 
C18 H18A OLC sing 363 n n 
C18 H18B OLC sing 364 n n 
C10 H10 OLC sing 365 n n 
C9 H9 OLC sing 366 n n 
C17 H17 OLC sing 367 n n 
C17 H17A OLC sing 368 n n 
C11 H11 OLC sing 369 n n 
C11 H11A OLC sing 370 n n 
C8 H8 OLC sing 371 n n 
C8 H8A OLC sing 372 n n 
C24 H24 OLC sing 373 n n 
C24 H24A OLC sing 374 n n 
C16 H16 OLC sing 375 n n 
C16 H16A OLC sing 376 n n 
C12 H12 OLC sing 377 n n 
C12 H12A OLC sing 378 n n 
C7 H7 OLC sing 379 n n 
C7 H7A OLC sing 380 n n 
C15 H15 OLC sing 381 n n 
C15 H15A OLC sing 382 n n 
C13 H13 OLC sing 383 n n 
C13 H13A OLC sing 384 n n 
C6 H6 OLC sing 385 n n 
C6 H6A OLC sing 386 n n 
C14 H14 OLC sing 387 n n 
C14 H14A OLC sing 388 n n 
C5 H5 OLC sing 389 n n 
C5 H5A OLC sing 390 n n 
C4 H4 OLC sing 391 n n 
C4 H4A OLC sing 392 n n 
C3 H3 OLC sing 393 n n 
C3 H3A OLC sing 394 n n 
C2 H2 OLC sing 395 n n 
C2 H2A OLC sing 396 n n 
C21 H21 OLC sing 397 n n 
C21 H21A OLC sing 398 n n 
C22 H22 OLC sing 399 n n 
O25 HO25 OLC sing 400 n n 
O23 HO23 OLC sing 401 n n 
#
_atom_sites.entry_id                     8AYO 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 4 GLU A 1 901 1327 GLU GLU . 
H 5 CYZ A 1 902 1331 CYZ CYZ . 
I 6 OLC A 1 903 1501 OLC OLC . 
J 7 PLM A 1 904 1601 PLM PLM . 
K 7 PLM A 1 905 1701 PLM PLM . 
L 8 POV A 1 906 1901 POV POV . 
M 4 GLU D 1 901 1327 GLU GLU . 
N 5 CYZ D 1 902 1331 CYZ CYZ . 
O 6 OLC D 1 903 1501 OLC OLC . 
P 4 GLU C 1 901 1327 GLU GLU . 
Q 5 CYZ C 1 902 1331 CYZ CYZ . 
R 6 OLC C 1 903 1501 OLC OLC . 
S 7 PLM C 1 904 1601 PLM PLM . 
T 7 PLM C 1 905 1701 PLM PLM . 
U 8 POV C 1 906 1901 POV POV . 
V 7 PLM I 1 1801 1801 PLM PLM . 
W 9 OIJ I 1 1802 301 OIJ L01 . 
X 7 PLM I 1 1803 1601 PLM PLM . 
Y 7 PLM I 1 1804 1701 PLM PLM . 
Z 7 PLM J 1 1801 1801 PLM PLM . 
AA 7 PLM J 1 1802 1601 PLM PLM . 
BA 7 PLM J 1 1803 1701 PLM PLM . 
CA 9 OIJ J 1 1804 301 OIJ L01 . 
DA 4 GLU B 1 901 1327 GLU GLU . 
EA 5 CYZ B 1 902 1331 CYZ CYZ . 
FA 6 OLC B 1 903 1501 OLC OLC . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C18 OLC . . . R 6 156.104 180.713 130.993 1 32.07 ? C18 OLC 903 C 1 
HETATM 2 C C10 OLC . . . R 6 153.961 179.195 139.917 1 32.07 ? C10 OLC 903 C 1 
HETATM 3 C C9 OLC . . . R 6 153.832 179.151 141.225 1 32.07 ? C9 OLC 903 C 1 
HETATM 4 C C17 OLC . . . R 6 155.658 181.062 132.406 1 32.07 ? C17 OLC 903 C 1 
HETATM 5 C C11 OLC . . . R 6 155.264 178.768 139.249 1 32.07 ? C11 OLC 903 C 1 
HETATM 6 C C8 OLC . . . R 6 152.519 179.588 141.867 1 32.07 ? C8 OLC 903 C 1 
HETATM 7 C C24 OLC . . . R 6 148.253 180.883 153.883 1 32.07 ? C24 OLC 903 C 1 
HETATM 8 C C16 OLC . . . R 6 155.222 179.806 133.152 1 32.07 ? C16 OLC 903 C 1 
HETATM 9 C C12 OLC . . . R 6 154.99 178.236 137.847 1 32.07 ? C12 OLC 903 C 1 
HETATM 10 C C7 OLC . . . R 6 152.604 179.522 143.389 1 32.07 ? C7 OLC 903 C 1 
HETATM 11 C C15 OLC . . . R 6 154.757 180.175 134.56 1 32.07 ? C15 OLC 903 C 1 
HETATM 12 C C13 OLC . . . R 6 154.54 179.36 136.913 1 32.07 ? C13 OLC 903 C 1 
HETATM 13 C C6 OLC . . . R 6 151.471 180.353 143.987 1 32.07 ? C6 OLC 903 C 1 
HETATM 14 C C14 OLC . . . R 6 154.685 178.936 135.451 1 32.07 ? C14 OLC 903 C 1 
HETATM 15 C C5 OLC . . . R 6 151.4 180.173 145.502 1 32.07 ? C5 OLC 903 C 1 
HETATM 16 C C4 OLC . . . R 6 150.4 181.182 146.061 1 32.07 ? C4 OLC 903 C 1 
HETATM 17 C C3 OLC . . . R 6 149.696 180.658 147.31 1 32.07 ? C3 OLC 903 C 1 
HETATM 18 C C2 OLC . . . R 6 150.42 181.094 148.581 1 32.07 ? C2 OLC 903 C 1 
HETATM 19 C C21 OLC . . . R 6 149.267 181.777 151.78 1 32.07 ? C21 OLC 903 C 1 
HETATM 20 C C1 OLC . . . R 6 149.486 181.921 149.46 1 32.07 ? C1 OLC 903 C 1 
HETATM 21 C C22 OLC . . . R 6 148.107 181.91 152.763 1 32.07 ? C22 OLC 903 C 1 
HETATM 22 O O19 OLC . . . R 6 149.342 183.074 149.239 1 32.07 ? O19 OLC 903 C 1 
HETATM 23 O O25 OLC . . . R 6 147.388 181.205 154.936 1 32.07 ? O25 OLC 903 C 1 
HETATM 24 O O23 OLC . . . R 6 148.112 183.197 153.311 1 32.07 ? O23 OLC 903 C 1 
HETATM 25 O O20 OLC . . . R 6 148.807 181.337 150.533 1 32.07 ? O20 OLC 903 C 1 
#
_model_server_stats.io_time_ms              29 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    42 
_model_server_stats.query_time_ms           443 
_model_server_stats.encode_time_ms          51 
_model_server_stats.element_count           25 
#