data_8B01 # _model_server_result.job_id 3gd3xA7MLOVpRWxuUXd12A _model_server_result.datetime_utc '2024-11-18 12:25:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8b01 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":202}' # _entry.id 8B01 # _exptl.entry_id 8B01 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 734.039 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PHOSPHATIDYLETHANOLAMINE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8B01 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8B01 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 Q N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 C SG CYS 412 C CYS 22 1_555 C SG CYS 485 C CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc1 B O SER 103 B SER 103 1_555 H NA NA . B NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.424 ? metalc ? metalc2 B O SER 106 B SER 106 1_555 H NA NA . B NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.536 ? metalc ? metalc3 B O GLY 145 B GLY 145 1_555 H NA NA . B NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc4 B O VAL 148 B VAL 148 1_555 H NA NA . B NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.515 ? metalc ? metalc5 B O PRO 150 B PRO 150 1_555 H NA NA . B NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.703 ? metalc ? metalc6 B O GLY 325 B GLY 325 1_555 I NA NA . B NA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.969 ? metalc ? metalc7 B O GLY 366 B GLY 366 1_555 I NA NA . B NA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.488 ? metalc ? metalc8 B O THR 369 B THR 369 1_555 I NA NA . B NA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.526 ? metalc ? metalc9 B OG1 THR 369 B THR 369 1_555 I NA NA . B NA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.674 ? metalc ? metalc10 B O MET 372 B MET 372 1_555 I NA NA . B NA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? # _chem_comp.formula 'C40 H80 N O8 P' _chem_comp.formula_weight 734.039 _chem_comp.id PTY _chem_comp.mon_nstd_flag . _chem_comp.name PHOSPHATIDYLETHANOLAMINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8B01 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 OCT A 1 201 2 OCT OCT . E 5 PTY A 1 202 7 PTY PTY . F 6 TWT A 1 203 8 TWT TWT . G 7 D10 A 1 204 9 D10 D10 . H 8 NA B 1 501 1 NA NA . I 8 NA B 1 502 2 NA NA . J 4 OCT B 1 503 1 OCT OCT . K 4 OCT B 1 504 3 OCT OCT . L 4 OCT B 1 505 4 OCT OCT . M 4 OCT B 1 506 5 OCT OCT . N 4 OCT B 1 507 6 OCT OCT . O 9 TRD B 1 508 10 TRD TRD . P 7 D10 B 1 509 11 D10 D10 . Q 5 PTY B 1 510 12 PTY PTY . R 10 HEX B 1 511 13 HEX HEX . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PTY . . . E 5 129.641 153.928 117.67 0.5 152.97 ? C1 PTY 202 A 1 HETATM 2 C C2 PTY . . . E 5 123.153 158.148 115.722 0.5 152.46 ? C2 PTY 202 A 1 HETATM 3 C C3 PTY . . . E 5 123.28 156.836 116.462 0.5 153.38 ? C3 PTY 202 A 1 HETATM 4 O O4 PTY . . . E 5 129.356 153.525 116.329 0.5 152.06 ? O4 PTY 202 A 1 HETATM 5 C C5 PTY . . . E 5 127.383 154.964 117.299 0.5 153.14 ? C5 PTY 202 A 1 HETATM 6 C C6 PTY . . . E 5 128.696 155.045 118.051 0.5 154.74 ? C6 PTY 202 A 1 HETATM 7 O O7 PTY . . . E 5 129.379 156.27 117.768 0.5 158.87 ? O7 PTY 202 A 1 HETATM 8 C C8 PTY . . . E 5 129.486 157.189 118.724 0.5 155.89 ? C8 PTY 202 A 1 HETATM 9 O O10 PTY . . . E 5 128.854 158.214 118.731 0.5 152.98 ? O10 PTY 202 A 1 HETATM 10 C C11 PTY . . . E 5 130.488 156.781 119.77 0.5 153.23 ? C11 PTY 202 A 1 HETATM 11 C C12 PTY . . . E 5 131.872 156.482 119.218 0.5 149.24 ? C12 PTY 202 A 1 HETATM 12 C C13 PTY . . . E 5 132.932 156.442 120.311 0.5 150.04 ? C13 PTY 202 A 1 HETATM 13 C C14 PTY . . . E 5 133.645 155.099 120.383 0.5 152.03 ? C14 PTY 202 A 1 HETATM 14 C C15 PTY . . . E 5 134.216 154.632 119.051 0.5 152.92 ? C15 PTY 202 A 1 HETATM 15 C C16 PTY . . . E 5 135.157 153.442 119.197 0.5 150.03 ? C16 PTY 202 A 1 HETATM 16 C C17 PTY . . . E 5 135.615 152.847 117.873 0.5 149.8 ? C17 PTY 202 A 1 HETATM 17 C C18 PTY . . . E 5 136.932 152.092 118.003 0.5 152.08 ? C18 PTY 202 A 1 HETATM 18 C C19 PTY . . . E 5 136.915 150.994 119.056 0.5 150.71 ? C19 PTY 202 A 1 HETATM 19 C C20 PTY . . . E 5 138.315 150.582 119.496 0.5 152.51 ? C20 PTY 202 A 1 HETATM 20 C C21 PTY . . . E 5 139.211 150.116 118.358 0.5 150.24 ? C21 PTY 202 A 1 HETATM 21 C C22 PTY . . . E 5 140.572 149.63 118.839 0.5 149.14 ? C22 PTY 202 A 1 HETATM 22 C C23 PTY . . . E 5 141.53 149.285 117.708 0.5 151.94 ? C23 PTY 202 A 1 HETATM 23 C C24 PTY . . . E 5 142.106 147.88 117.822 0.5 153.74 ? C24 PTY 202 A 1 HETATM 24 C C25 PTY . . . E 5 142.779 147.397 116.545 0.5 152.48 ? C25 PTY 202 A 1 HETATM 25 C C26 PTY . . . E 5 144.054 148.159 116.207 0.5 153.58 ? C26 PTY 202 A 1 HETATM 26 C C27 PTY . . . E 5 145.279 147.649 116.952 0.5 152.92 ? C27 PTY 202 A 1 HETATM 27 C C28 PTY . . . E 5 146.586 148.265 116.47 0.5 151.97 ? C28 PTY 202 A 1 HETATM 28 C C29 PTY . . . E 5 146.765 149.706 116.927 0.5 149.86 ? C29 PTY 202 A 1 HETATM 29 C C30 PTY . . . E 5 130.041 154.088 115.334 0.5 154.43 ? C30 PTY 202 A 1 HETATM 30 C C31 PTY . . . E 5 131.53 153.995 115.539 0.5 154.19 ? C31 PTY 202 A 1 HETATM 31 O O30 PTY . . . E 5 129.503 154.606 114.389 0.5 152.77 ? O30 PTY 202 A 1 HETATM 32 C C32 PTY . . . E 5 132.086 152.581 115.496 0.5 151.16 ? C32 PTY 202 A 1 HETATM 33 C C33 PTY . . . E 5 131.92 151.923 114.132 0.5 150.91 ? C33 PTY 202 A 1 HETATM 34 C C34 PTY . . . E 5 132.663 150.597 114.045 0.5 150.58 ? C34 PTY 202 A 1 HETATM 35 C C35 PTY . . . E 5 132.459 149.71 115.265 0.5 152.79 ? C35 PTY 202 A 1 HETATM 36 C C36 PTY . . . E 5 133.194 148.381 115.161 0.5 150.02 ? C36 PTY 202 A 1 HETATM 37 C C37 PTY . . . E 5 134.663 148.533 114.795 0.5 150.1 ? C37 PTY 202 A 1 HETATM 38 C C38 PTY . . . E 5 135.35 147.206 114.501 0.5 149.09 ? C38 PTY 202 A 1 HETATM 39 C C39 PTY . . . E 5 135.614 146.365 115.741 0.5 149.46 ? C39 PTY 202 A 1 HETATM 40 C C40 PTY . . . E 5 136.757 145.379 115.542 0.5 150.22 ? C40 PTY 202 A 1 HETATM 41 C C41 PTY . . . E 5 138.068 146.063 115.179 0.5 151.66 ? C41 PTY 202 A 1 HETATM 42 C C42 PTY . . . E 5 138.954 145.23 114.262 0.5 151.58 ? C42 PTY 202 A 1 HETATM 43 C C43 PTY . . . E 5 139.566 144.011 114.941 0.5 149.72 ? C43 PTY 202 A 1 HETATM 44 C C44 PTY . . . E 5 140.522 143.253 114.03 0.5 149.5 ? C44 PTY 202 A 1 HETATM 45 P P1 PTY . . . E 5 125.887 157.019 116.736 0.5 169.33 ? P1 PTY 202 A 1 HETATM 46 O O11 PTY . . . E 5 124.378 156.908 117.361 0.5 158 ? O11 PTY 202 A 1 HETATM 47 O O12 PTY . . . E 5 125.929 156.44 115.356 0.5 160.46 ? O12 PTY 202 A 1 HETATM 48 O O13 PTY . . . E 5 126.478 158.37 116.997 0.5 150.27 ? O13 PTY 202 A 1 HETATM 49 O O14 PTY . . . E 5 126.495 155.93 117.809 0.5 156.45 ? O14 PTY 202 A 1 HETATM 50 N N1 PTY . . . E 5 123.866 158.117 114.455 0.5 151.51 ? N1 PTY 202 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 240 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 50 #