data_8B0B
#
_model_server_result.job_id            Hj01czhm0jbv98up9Rwq6Q 
_model_server_result.datetime_utc      '2025-01-10 15:18:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8b0b 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":604}' 
#
_entry.id    8B0B 
#
_exptl.entry_id    8B0B 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          98.702 
_cell.angle_gamma         90 
_cell.entry_id            8B0B 
_cell.length_a            44.442 
_cell.length_b            70.846 
_cell.length_c            78.293 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8B0B 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 279 AAA CYS 437 1_555 A SG CYS 384 AAA CYS 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? 
covale ? covale1 A ND2 ASN 42 AAA ASN 200 1_555 C C1 NAG . AAA NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.459 ? 
covale ? covale2 A ND2 ASN 80 AAA ASN 238 1_555 D C1 NAG . AAA NAG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? 
covale ? covale3 A OE2 GLU 185 AAA GLU 343 1_555 G C1 OUU . AAA OUU 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? 
covale ? covale4 A ND2 ASN 301 AAA ASN 459 1_555 E C1 NAG . AAA NAG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.475 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     8B0B 
_atom_sites.fract_transf_matrix[1][1]    0.022501 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003444 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014115 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012921 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 NAG AAA 1 601 601 NAG NAG . 
D 3 NAG AAA 1 602 602 NAG NAG . 
E 3 NAG AAA 1 603 603 NAG NAG . 
F 4 EDO AAA 1 604 701 EDO EDO . 
G 5 OUU AAA 1 605 801 OUU VBA . 
H 6 HOH AAA 1 701 68 HOH HOH . 
H 6 HOH AAA 2 702 109 HOH HOH . 
H 6 HOH AAA 3 703 26 HOH HOH . 
H 6 HOH AAA 4 704 123 HOH HOH . 
H 6 HOH AAA 5 705 100 HOH HOH . 
H 6 HOH AAA 6 706 20 HOH HOH . 
H 6 HOH AAA 7 707 28 HOH HOH . 
H 6 HOH AAA 8 708 54 HOH HOH . 
H 6 HOH AAA 9 709 104 HOH HOH . 
H 6 HOH AAA 10 710 50 HOH HOH . 
H 6 HOH AAA 11 711 66 HOH HOH . 
H 6 HOH AAA 12 712 117 HOH HOH . 
H 6 HOH AAA 13 713 35 HOH HOH . 
H 6 HOH AAA 14 714 32 HOH HOH . 
H 6 HOH AAA 15 715 105 HOH HOH . 
H 6 HOH AAA 16 716 56 HOH HOH . 
H 6 HOH AAA 17 717 46 HOH HOH . 
H 6 HOH AAA 18 718 42 HOH HOH . 
H 6 HOH AAA 19 719 22 HOH HOH . 
H 6 HOH AAA 20 720 19 HOH HOH . 
H 6 HOH AAA 21 721 74 HOH HOH . 
H 6 HOH AAA 22 722 61 HOH HOH . 
H 6 HOH AAA 23 723 34 HOH HOH . 
H 6 HOH AAA 24 724 87 HOH HOH . 
H 6 HOH AAA 25 725 69 HOH HOH . 
H 6 HOH AAA 26 726 33 HOH HOH . 
H 6 HOH AAA 27 727 107 HOH HOH . 
H 6 HOH AAA 28 728 24 HOH HOH . 
H 6 HOH AAA 29 729 62 HOH HOH . 
H 6 HOH AAA 30 730 31 HOH HOH . 
H 6 HOH AAA 31 731 44 HOH HOH . 
H 6 HOH AAA 32 732 130 HOH HOH . 
H 6 HOH AAA 33 733 15 HOH HOH . 
H 6 HOH AAA 34 734 27 HOH HOH . 
H 6 HOH AAA 35 735 64 HOH HOH . 
H 6 HOH AAA 36 736 49 HOH HOH . 
H 6 HOH AAA 37 737 21 HOH HOH . 
H 6 HOH AAA 38 738 80 HOH HOH . 
H 6 HOH AAA 39 739 71 HOH HOH . 
H 6 HOH AAA 40 740 13 HOH HOH . 
H 6 HOH AAA 41 741 70 HOH HOH . 
H 6 HOH AAA 42 742 82 HOH HOH . 
H 6 HOH AAA 43 743 76 HOH HOH . 
H 6 HOH AAA 44 744 45 HOH HOH . 
H 6 HOH AAA 45 745 55 HOH HOH . 
H 6 HOH AAA 46 746 17 HOH HOH . 
H 6 HOH AAA 47 747 111 HOH HOH . 
H 6 HOH AAA 48 748 10 HOH HOH . 
H 6 HOH AAA 49 749 47 HOH HOH . 
H 6 HOH AAA 50 750 29 HOH HOH . 
H 6 HOH AAA 51 751 88 HOH HOH . 
H 6 HOH AAA 52 752 120 HOH HOH . 
H 6 HOH AAA 53 753 43 HOH HOH . 
H 6 HOH AAA 54 754 53 HOH HOH . 
H 6 HOH AAA 55 755 92 HOH HOH . 
H 6 HOH AAA 56 756 58 HOH HOH . 
H 6 HOH AAA 57 757 5 HOH HOH . 
H 6 HOH AAA 58 758 48 HOH HOH . 
H 6 HOH AAA 59 759 77 HOH HOH . 
H 6 HOH AAA 60 760 72 HOH HOH . 
H 6 HOH AAA 61 761 40 HOH HOH . 
H 6 HOH AAA 62 762 124 HOH HOH . 
H 6 HOH AAA 63 763 25 HOH HOH . 
H 6 HOH AAA 64 764 75 HOH HOH . 
H 6 HOH AAA 65 765 128 HOH HOH . 
H 6 HOH AAA 66 766 36 HOH HOH . 
H 6 HOH AAA 67 767 38 HOH HOH . 
H 6 HOH AAA 68 768 23 HOH HOH . 
H 6 HOH AAA 69 769 6 HOH HOH . 
H 6 HOH AAA 70 770 2 HOH HOH . 
H 6 HOH AAA 71 771 11 HOH HOH . 
H 6 HOH AAA 72 772 14 HOH HOH . 
H 6 HOH AAA 73 773 18 HOH HOH . 
H 6 HOH AAA 74 774 9 HOH HOH . 
H 6 HOH AAA 75 775 94 HOH HOH . 
H 6 HOH AAA 76 776 52 HOH HOH . 
H 6 HOH AAA 77 777 67 HOH HOH . 
H 6 HOH AAA 78 778 79 HOH HOH . 
H 6 HOH AAA 79 779 59 HOH HOH . 
H 6 HOH AAA 80 780 127 HOH HOH . 
H 6 HOH AAA 81 781 84 HOH HOH . 
H 6 HOH AAA 82 782 83 HOH HOH . 
H 6 HOH AAA 83 783 41 HOH HOH . 
H 6 HOH AAA 84 784 39 HOH HOH . 
H 6 HOH AAA 85 785 16 HOH HOH . 
H 6 HOH AAA 86 786 131 HOH HOH . 
H 6 HOH AAA 87 787 3 HOH HOH . 
H 6 HOH AAA 88 788 116 HOH HOH . 
H 6 HOH AAA 89 789 114 HOH HOH . 
H 6 HOH AAA 90 790 122 HOH HOH . 
H 6 HOH AAA 91 791 118 HOH HOH . 
H 6 HOH AAA 92 792 97 HOH HOH . 
H 6 HOH AAA 93 793 91 HOH HOH . 
H 6 HOH AAA 94 794 93 HOH HOH . 
H 6 HOH AAA 95 795 96 HOH HOH . 
H 6 HOH AAA 96 796 125 HOH HOH . 
H 6 HOH AAA 97 797 99 HOH HOH . 
H 6 HOH AAA 98 798 113 HOH HOH . 
H 6 HOH AAA 99 799 98 HOH HOH . 
I 6 HOH BBB 1 201 121 HOH HOH . 
I 6 HOH BBB 2 202 4 HOH HOH . 
I 6 HOH BBB 3 203 115 HOH HOH . 
I 6 HOH BBB 4 204 106 HOH HOH . 
I 6 HOH BBB 5 205 129 HOH HOH . 
I 6 HOH BBB 6 206 65 HOH HOH . 
I 6 HOH BBB 7 207 89 HOH HOH . 
I 6 HOH BBB 8 208 37 HOH HOH . 
I 6 HOH BBB 9 209 108 HOH HOH . 
I 6 HOH BBB 10 210 103 HOH HOH . 
I 6 HOH BBB 11 211 8 HOH HOH . 
I 6 HOH BBB 12 212 73 HOH HOH . 
I 6 HOH BBB 13 213 85 HOH HOH . 
I 6 HOH BBB 14 214 30 HOH HOH . 
I 6 HOH BBB 15 215 60 HOH HOH . 
I 6 HOH BBB 16 216 12 HOH HOH . 
I 6 HOH BBB 17 217 119 HOH HOH . 
I 6 HOH BBB 18 218 86 HOH HOH . 
I 6 HOH BBB 19 219 101 HOH HOH . 
I 6 HOH BBB 20 220 51 HOH HOH . 
I 6 HOH BBB 21 221 112 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . F 4 -4.341 5.658 40.489 1 36.96 ? C1 EDO 604 AAA 1 
HETATM 2 O O1 EDO . . . F 4 -4.495 6.05 41.836 1 27.39 ? O1 EDO 604 AAA 1 
HETATM 3 C C2 EDO . . . F 4 -5.618 5.304 39.834 1 37.24 ? C2 EDO 604 AAA 1 
HETATM 4 O O2 EDO . . . F 4 -6.535 4.722 40.733 1 40.23 ? O2 EDO 604 AAA 1 
HETATM 5 H H11 EDO . . . F 4 -3.739 4.888 40.445 1 34.46 ? H11 EDO 604 AAA 1 
HETATM 6 H H12 EDO . . . F 4 -3.927 6.394 39.994 1 34.43 ? H12 EDO 604 AAA 1 
HETATM 7 H HO1 EDO . . . F 4 -3.742 6.267 42.14 0 29.13 ? HO1 EDO 604 AAA 1 
HETATM 8 H H21 EDO . . . F 4 -5.438 4.675 39.104 1 37.85 ? H21 EDO 604 AAA 1 
HETATM 9 H H22 EDO . . . F 4 -6.015 6.113 39.45 1 37.81 ? H22 EDO 604 AAA 1 
HETATM 10 H HO2 EDO . . . F 4 -6.111 4.287 41.329 1 39.27 ? HO2 EDO 604 AAA 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           27 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           269 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           10 
#