data_8B0C # _model_server_result.job_id JjRAFv74RgxIl3q2TZJctA _model_server_result.datetime_utc '2025-01-25 13:02:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8b0c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":604}' # _entry.id 8B0C # _exptl.entry_id 8B0C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 331.242 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(1~{S},2~{R},3~{R},4~{S},6~{S})-3,4,6-tris(oxidanyl)-2-[2-[2,2,2-tris(fluoranyl)ethanoylamino]ethoxy]cyclohexane-1-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.45 _cell.angle_gamma 90 _cell.entry_id 8B0C _cell.length_a 45.976 _cell.length_b 71.441 _cell.length_c 78.261 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8B0C _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 279 AAA CYS 437 1_555 A SG CYS 384 AAA CYS 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? covale ? covale1 A ND2 ASN 42 AAA ASN 200 1_555 C C1 NAG . AAA NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.452 ? covale ? covale2 A ND2 ASN 80 AAA ASN 238 1_555 D C1 NAG . AAA NAG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.456 ? covale ? covale3 A OE2 GLU 185 AAA GLU 343 1_555 F C1 OV3 . AAA OV3 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.457 ? covale ? covale4 A ND2 ASN 301 AAA ASN 459 1_555 E C1 NAG . AAA NAG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? # _chem_comp.formula 'C11 H16 F3 N O7' _chem_comp.formula_weight 331.242 _chem_comp.id OV3 _chem_comp.mon_nstd_flag . _chem_comp.name '(1~{S},2~{R},3~{R},4~{S},6~{S})-3,4,6-tris(oxidanyl)-2-[2-[2,2,2-tris(fluoranyl)ethanoylamino]ethoxy]cyclohexane-1-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O2 C2 OV3 sing 267 n n C1 C2 OV3 sing 268 n n C1 C7 OV3 sing 269 n n C2 C3 OV3 sing 270 n n O8 C7 OV3 sing 271 n n C7 C5 OV3 sing 272 n n C3 O3 OV3 sing 273 n n C3 C4 OV3 sing 274 n n C5 C4 OV3 sing 275 n n C5 C6 OV3 sing 276 n n C4 O4 OV3 sing 277 n n O6B C6 OV3 doub 278 n n C6 O6A OV3 sing 279 n n O4 C8 OV3 sing 280 n n C8 C9 OV3 sing 281 n n C9 N10 OV3 sing 282 n n N10 C11 OV3 sing 283 n n F1 C12 OV3 sing 284 n n C11 C12 OV3 sing 285 n n C11 O13 OV3 doub 286 n n F2 C12 OV3 sing 287 n n C12 F3 OV3 sing 288 n n C1 H1 OV3 sing 289 n n C1 H13 OV3 sing 290 n n C7 H9 OV3 sing 291 n n C5 H5 OV3 sing 292 n n O6A H6 OV3 sing 293 n n C4 H4 OV3 sing 294 n n C3 H3 OV3 sing 295 n n O3 HO3 OV3 sing 296 n n C2 H2 OV3 sing 297 n n O2 HO2 OV3 sing 298 n n O8 H11 OV3 sing 299 n n C8 H8 OV3 sing 300 n n C8 H81 OV3 sing 301 n n C9 H91 OV3 sing 302 n n C9 H92 OV3 sing 303 n n N10 HN10 OV3 sing 304 n n # _atom_sites.entry_id 8B0C _atom_sites.fract_transf_matrix[1][1] 0.02175 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002075 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013998 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012836 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NAG AAA 1 601 601 NAG NAG . D 3 NAG AAA 1 602 602 NAG NAG . E 3 NAG AAA 1 603 603 NAG NAG . F 4 OV3 AAA 1 604 604 OV3 VBB . G 5 HOH AAA 1 701 28 HOH HOH . G 5 HOH AAA 2 702 109 HOH HOH . G 5 HOH AAA 3 703 113 HOH HOH . G 5 HOH AAA 4 704 54 HOH HOH . G 5 HOH AAA 5 705 42 HOH HOH . G 5 HOH AAA 6 706 69 HOH HOH . G 5 HOH AAA 7 707 148 HOH HOH . G 5 HOH AAA 8 708 147 HOH HOH . G 5 HOH AAA 9 709 33 HOH HOH . G 5 HOH AAA 10 710 142 HOH HOH . G 5 HOH AAA 11 711 58 HOH HOH . G 5 HOH AAA 12 712 24 HOH HOH . G 5 HOH AAA 13 713 50 HOH HOH . G 5 HOH AAA 14 714 13 HOH HOH . G 5 HOH AAA 15 715 125 HOH HOH . G 5 HOH AAA 16 716 70 HOH HOH . G 5 HOH AAA 17 717 143 HOH HOH . G 5 HOH AAA 18 718 15 HOH HOH . G 5 HOH AAA 19 719 22 HOH HOH . G 5 HOH AAA 20 720 31 HOH HOH . G 5 HOH AAA 21 721 120 HOH HOH . G 5 HOH AAA 22 722 21 HOH HOH . G 5 HOH AAA 23 723 112 HOH HOH . G 5 HOH AAA 24 724 135 HOH HOH . G 5 HOH AAA 25 725 153 HOH HOH . G 5 HOH AAA 26 726 127 HOH HOH . G 5 HOH AAA 27 727 46 HOH HOH . G 5 HOH AAA 28 728 72 HOH HOH . G 5 HOH AAA 29 729 115 HOH HOH . G 5 HOH AAA 30 730 144 HOH HOH . G 5 HOH AAA 31 731 138 HOH HOH . G 5 HOH AAA 32 732 10 HOH HOH . G 5 HOH AAA 33 733 111 HOH HOH . G 5 HOH AAA 34 734 39 HOH HOH . G 5 HOH AAA 35 735 25 HOH HOH . G 5 HOH AAA 36 736 122 HOH HOH . G 5 HOH AAA 37 737 136 HOH HOH . G 5 HOH AAA 38 738 117 HOH HOH . G 5 HOH AAA 39 739 150 HOH HOH . G 5 HOH AAA 40 740 121 HOH HOH . G 5 HOH AAA 41 741 128 HOH HOH . G 5 HOH AAA 42 742 9 HOH HOH . G 5 HOH AAA 43 743 11 HOH HOH . G 5 HOH AAA 44 744 149 HOH HOH . G 5 HOH AAA 45 745 2 HOH HOH . G 5 HOH AAA 46 746 130 HOH HOH . G 5 HOH AAA 47 747 6 HOH HOH . G 5 HOH AAA 48 748 133 HOH HOH . G 5 HOH AAA 49 749 101 HOH HOH . G 5 HOH AAA 50 750 41 HOH HOH . G 5 HOH AAA 51 751 3 HOH HOH . G 5 HOH AAA 52 752 114 HOH HOH . G 5 HOH AAA 53 753 152 HOH HOH . G 5 HOH AAA 54 754 52 HOH HOH . G 5 HOH AAA 55 755 154 HOH HOH . G 5 HOH AAA 56 756 84 HOH HOH . H 5 HOH BBB 1 201 155 HOH HOH . H 5 HOH BBB 2 202 12 HOH HOH . H 5 HOH BBB 3 203 141 HOH HOH . H 5 HOH BBB 4 204 137 HOH HOH . H 5 HOH BBB 5 205 60 HOH HOH . H 5 HOH BBB 6 206 146 HOH HOH . H 5 HOH BBB 7 207 124 HOH HOH . H 5 HOH BBB 8 208 119 HOH HOH . H 5 HOH BBB 9 209 132 HOH HOH . H 5 HOH BBB 10 210 123 HOH HOH . H 5 HOH BBB 11 211 118 HOH HOH . H 5 HOH BBB 12 212 129 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 OV3 . . . F 4 -13.381 14.589 18.988 1 39.68 ? C1 OV3 604 AAA 1 HETATM 2 C C7 OV3 . . . F 4 -14.095 15.443 20.022 1 39.02 ? C7 OV3 604 AAA 1 HETATM 3 C C5 OV3 . . . F 4 -13.736 16.938 19.873 1 40.68 ? C5 OV3 604 AAA 1 HETATM 4 C C6 OV3 . . . F 4 -14.47 17.827 20.881 1 39.45 ? C6 OV3 604 AAA 1 HETATM 5 O O6A OV3 . . . F 4 -13.835 18.689 21.471 1 40.55 ? O6A OV3 604 AAA 1 HETATM 6 O O6B OV3 . . . F 4 -15.643 17.602 21.111 1 41.54 ? O6B OV3 604 AAA 1 HETATM 7 C C4 OV3 . . . F 4 -13.894 17.484 18.446 1 43.15 ? C4 OV3 604 AAA 1 HETATM 8 O O4 OV3 . A . F 4 -13.357 18.807 18.443 0.5 45.2 ? O4 OV3 604 AAA 1 HETATM 9 O O4 OV3 . B . F 4 -13.37 18.806 18.481 0.5 45.61 ? O4 OV3 604 AAA 1 HETATM 10 C C3 OV3 . . . F 4 -13.131 16.605 17.459 1 43.94 ? C3 OV3 604 AAA 1 HETATM 11 O O3 OV3 . . . F 4 -13.295 17.077 16.107 1 44.23 ? O3 OV3 604 AAA 1 HETATM 12 C C2 OV3 . . . F 4 -13.596 15.152 17.582 1 42.76 ? C2 OV3 604 AAA 1 HETATM 13 O O2 OV3 . . . F 4 -12.914 14.323 16.636 1 42.31 ? O2 OV3 604 AAA 1 HETATM 14 O O8 OV3 . . . F 4 -15.5 15.241 19.916 1 39.45 ? O8 OV3 604 AAA 1 HETATM 15 C C8 OV3 . A . F 4 -14.31 19.86 18.197 0.5 47.67 ? C8 OV3 604 AAA 1 HETATM 16 C C8 OV3 . B . F 4 -13.665 19.64 17.348 0.5 49.53 ? C8 OV3 604 AAA 1 HETATM 17 C C9 OV3 . A . F 4 -13.719 21.172 17.716 0.5 49.96 ? C9 OV3 604 AAA 1 HETATM 18 C C9 OV3 . B . F 4 -15.136 19.743 17.036 0.5 49.7 ? C9 OV3 604 AAA 1 HETATM 19 N N10 OV3 . A . F 4 -12.294 21.345 17.973 0.5 50.52 ? N10 OV3 604 AAA 1 HETATM 20 N N10 OV3 . B . F 4 -15.544 21.086 16.667 0.5 46.9 ? N10 OV3 604 AAA 1 HETATM 21 C C11 OV3 . A . F 4 -11.526 22.265 17.387 0.5 52.04 ? C11 OV3 604 AAA 1 HETATM 22 C C11 OV3 . B . F 4 -15.795 21.497 15.429 0.5 47.16 ? C11 OV3 604 AAA 1 HETATM 23 C C12 OV3 . A . F 4 -10.192 22.549 18.082 0.5 48.37 ? C12 OV3 604 AAA 1 HETATM 24 C C12 OV3 . B . F 4 -16.619 22.774 15.333 0.5 47.35 ? C12 OV3 604 AAA 1 HETATM 25 O O13 OV3 . A . F 4 -11.803 22.854 16.356 0.5 57.82 ? O13 OV3 604 AAA 1 HETATM 26 O O13 OV3 . B . F 4 -15.426 20.959 14.401 0.5 44.77 ? O13 OV3 604 AAA 1 HETATM 27 F F1 OV3 . A . F 4 -9.763 23.785 17.937 0.5 48.18 ? F1 OV3 604 AAA 1 HETATM 28 F F1 OV3 . B . F 4 -15.891 23.862 15.513 0.5 45.43 ? F1 OV3 604 AAA 1 HETATM 29 F F2 OV3 . A . F 4 -10.305 22.348 19.374 0.5 58.39 ? F2 OV3 604 AAA 1 HETATM 30 F F2 OV3 . B . F 4 -17.175 22.855 14.142 0.5 47.56 ? F2 OV3 604 AAA 1 HETATM 31 F F3 OV3 . A . F 4 -9.212 21.784 17.646 0.5 50.5 ? F3 OV3 604 AAA 1 HETATM 32 F F3 OV3 . B . F 4 -17.577 22.811 16.246 0.5 45.53 ? F3 OV3 604 AAA 1 HETATM 33 H H13 OV3 . . . F 4 -13.742 13.671 19.023 1 40.16 ? H13 OV3 604 AAA 1 HETATM 34 H H9 OV3 . . . F 4 -13.814 15.148 20.922 1 39.58 ? H9 OV3 604 AAA 1 HETATM 35 H H5 OV3 . . . F 4 -12.778 17.015 20.094 1 40.58 ? H5 OV3 604 AAA 1 HETATM 36 H H4 OV3 . . . F 4 -14.851 17.508 18.206 1 43.62 ? H4 OV3 604 AAA 1 HETATM 37 H H3 OV3 . . . F 4 -12.167 16.646 17.682 1 43.61 ? H3 OV3 604 AAA 1 HETATM 38 H HO3 OV3 . . . F 4 -12.861 16.568 15.594 0 44.34 ? HO3 OV3 604 AAA 1 HETATM 39 H H2 OV3 . . . F 4 -14.559 15.12 17.385 1 42.29 ? H2 OV3 604 AAA 1 HETATM 40 H HO2 OV3 . . . F 4 -12.387 14.799 16.186 0 42.24 ? HO2 OV3 604 AAA 1 HETATM 41 H H11 OV3 . . . F 4 -15.866 15.988 19.8 0 39.59 ? H11 OV3 604 AAA 1 HETATM 42 H H8 OV3 . A . F 4 -14.81 20.022 19.023 0.5 47.58 ? H8 OV3 604 AAA 1 HETATM 43 H H8 OV3 . B . F 4 -13.201 19.291 16.568 0.5 48.6 ? H8 OV3 604 AAA 1 HETATM 44 H H81 OV3 . A . F 4 -14.951 19.544 17.526 0.5 47.58 ? H81 OV3 604 AAA 1 HETATM 45 H H81 OV3 . B . F 4 -13.313 20.537 17.522 0.5 48.62 ? H81 OV3 604 AAA 1 HETATM 46 H H91 OV3 . A . F 4 -14.199 21.911 18.152 0.5 49.54 ? H91 OV3 604 AAA 1 HETATM 47 H H91 OV3 . B . F 4 -15.651 19.473 17.826 0.5 48.96 ? H91 OV3 604 AAA 1 HETATM 48 H H92 OV3 . A . F 4 -13.867 21.249 16.748 0.5 49.54 ? H92 OV3 604 AAA 1 HETATM 49 H H92 OV3 . B . F 4 -15.352 19.136 16.296 0.5 48.99 ? H92 OV3 604 AAA 1 HETATM 50 H HN10 OV3 . A . F 4 -11.929 20.803 18.551 0.5 50.74 ? HN10 OV3 604 AAA 1 HETATM 51 H HN10 OV3 . B . F 4 -15.628 21.659 17.319 0.5 47.61 ? HN10 OV3 604 AAA 1 # _model_server_stats.io_time_ms 70 _model_server_stats.parse_time_ms 33 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 260 _model_server_stats.encode_time_ms 28 _model_server_stats.element_count 51 #