data_8B1B # _model_server_result.job_id efSFv6TX2yv02_05ozSpoA _model_server_result.datetime_utc '2025-04-09 14:51:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8b1b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":801}' # _entry.id 8B1B # _exptl.entry_id 8B1B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 510.615 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECYL-BETA-D-MALTOSIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8B1B _cell.length_a 54.591 _cell.length_b 125.836 _cell.length_c 169.031 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8B1B _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall 'P 2 2ab (z,x,y)' _symmetry.space_group_name_H-M 'P 2 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 21 _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 22 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 94 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 95 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.124 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C24 H46 O11' _chem_comp.formula_weight 510.615 _chem_comp.id LMT _chem_comp.mon_nstd_flag . _chem_comp.name DODECYL-BETA-D-MALTOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1B C2B LMT sing 331 n n C1B O1B LMT sing 332 n n C1B O5B LMT sing 333 n n C1B H1B LMT sing 334 n n C2B C3B LMT sing 335 n n C2B O2B LMT sing 336 n n C2B H2B LMT sing 337 n n C3B C4B LMT sing 338 n n C3B O3B LMT sing 339 n n C3B H3B LMT sing 340 n n C4B C5B LMT sing 341 n n C4B O4' LMT sing 342 n n C4B H4B LMT sing 343 n n C5B C6B LMT sing 344 n n C5B O5B LMT sing 345 n n C5B H5B LMT sing 346 n n C6B O6B LMT sing 347 n n C6B "H6'2" LMT sing 348 n n C6B "H6'1" LMT sing 349 n n O1B C4' LMT sing 350 n n O2B H2O1 LMT sing 351 n n O3B H3O1 LMT sing 352 n n O4' H4O1 LMT sing 353 n n O6B H6B LMT sing 354 n n C1' C2' LMT sing 355 n n C1' O1' LMT sing 356 n n C1' O5' LMT sing 357 n n C1' H1' LMT sing 358 n n C2' C3' LMT sing 359 n n C2' O2' LMT sing 360 n n C2' H2' LMT sing 361 n n C3' C4' LMT sing 362 n n C3' O3' LMT sing 363 n n C3' H3' LMT sing 364 n n C4' C5' LMT sing 365 n n C4' H4' LMT sing 366 n n C5' C6' LMT sing 367 n n C5' O5' LMT sing 368 n n C5' H5' LMT sing 369 n n C6' O6' LMT sing 370 n n C6' H6D LMT sing 371 n n C6' H6E LMT sing 372 n n O1' C1 LMT sing 373 n n O2' H2O2 LMT sing 374 n n O3' H3O2 LMT sing 375 n n O6' H6' LMT sing 376 n n C1 C2 LMT sing 377 n n C1 H12 LMT sing 378 n n C1 H11 LMT sing 379 n n C2 C3 LMT sing 380 n n C2 H22 LMT sing 381 n n C2 H21 LMT sing 382 n n C3 C4 LMT sing 383 n n C3 H32 LMT sing 384 n n C3 H31 LMT sing 385 n n C4 C5 LMT sing 386 n n C4 H42 LMT sing 387 n n C4 H41 LMT sing 388 n n C5 C6 LMT sing 389 n n C5 H52 LMT sing 390 n n C5 H51 LMT sing 391 n n C6 C7 LMT sing 392 n n C6 H62 LMT sing 393 n n C6 H61 LMT sing 394 n n C7 C8 LMT sing 395 n n C7 H72 LMT sing 396 n n C7 H71 LMT sing 397 n n C8 C9 LMT sing 398 n n C8 H82 LMT sing 399 n n C8 H81 LMT sing 400 n n C9 C10 LMT sing 401 n n C9 H92 LMT sing 402 n n C9 H91 LMT sing 403 n n C10 C11 LMT sing 404 n n C10 H102 LMT sing 405 n n C10 H101 LMT sing 406 n n C11 C12 LMT sing 407 n n C11 H112 LMT sing 408 n n C11 H111 LMT sing 409 n n C12 H123 LMT sing 410 n n C12 H122 LMT sing 411 n n C12 H121 LMT sing 412 n n # _atom_sites.entry_id 8B1B _atom_sites.fract_transf_matrix[1][1] 0.018318 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007947 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005916 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 LMT A 1 801 801 LMT LMT . E 5 OCT A 1 802 1101 OCT OCT . F 6 PG4 A 1 803 1201 PG4 PG4 . G 7 1PE A 1 804 1301 1PE 1PE . H 6 PG4 A 1 805 1701 PG4 PG4 . I 6 PG4 A 1 806 1801 PG4 PG4 . J 6 PG4 A 1 807 1901 PG4 PG4 . K 6 PG4 A 1 808 2001 PG4 PG4 . L 8 D12 A 1 809 2101 D12 D12 . M 9 GOL A 1 810 2201 GOL GOL . N 7 1PE A 1 811 2301 1PE 1PE . O 10 D10 A 1 812 2401 D10 D10 . P 9 GOL A 1 813 2501 GOL GOL . Q 11 HEX A 1 814 1 HEX HEX . R 11 HEX A 1 815 2 HEX HEX . S 12 HOH A 1 901 13 HOH HOH . S 12 HOH A 2 902 2 HOH HOH . S 12 HOH A 3 903 3 HOH HOH . S 12 HOH A 4 904 1 HOH HOH . S 12 HOH A 5 905 9 HOH HOH . S 12 HOH A 6 906 12 HOH HOH . S 12 HOH A 7 907 6 HOH HOH . S 12 HOH A 8 908 11 HOH HOH . S 12 HOH A 9 909 10 HOH HOH . S 12 HOH A 10 910 5 HOH HOH . T 12 HOH B 1 201 4 HOH HOH . T 12 HOH B 2 202 7 HOH HOH . T 12 HOH B 3 203 8 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1B LMT . . . D 4 7.056 27.817 60.126 1 97.22 ? C1B LMT 801 A 1 HETATM 2 C C2B LMT . . . D 4 7.646 26.425 60.186 1 92.88 ? C2B LMT 801 A 1 HETATM 3 C C3B LMT . . . D 4 8.227 26.129 58.848 1 91.28 ? C3B LMT 801 A 1 HETATM 4 C C4B LMT . . . D 4 7.055 25.866 57.944 1 90.09 ? C4B LMT 801 A 1 HETATM 5 C C5B LMT . . . D 4 6.329 27.187 57.773 1 86.57 ? C5B LMT 801 A 1 HETATM 6 C C6B LMT . . . D 4 5.09 26.993 56.951 1 87.02 ? C6B LMT 801 A 1 HETATM 7 O O1B LMT . . . D 4 8.098 28.65 59.772 1 97.92 ? O1B LMT 801 A 1 HETATM 8 O O2B LMT . . . D 4 8.636 26.379 61.221 1 103.5 ? O2B LMT 801 A 1 HETATM 9 O O3B LMT . . . D 4 9.244 25.07 58.829 1 84.68 ? O3B LMT 801 A 1 HETATM 10 O O4' LMT . . . D 4 7.422 25.388 56.64 1 93.07 ? O4' LMT 801 A 1 HETATM 11 O O5B LMT . . . D 4 5.971 27.761 59.086 1 102.79 ? O5B LMT 801 A 1 HETATM 12 O O6B LMT . . . D 4 3.951 27.391 57.704 1 95.11 ? O6B LMT 801 A 1 HETATM 13 C C1' LMT . . . D 4 5.744 31.95 60.407 1 117.06 ? C1' LMT 801 A 1 HETATM 14 C C2' LMT . . . D 4 5.636 31.195 59.078 1 108.36 ? C2' LMT 801 A 1 HETATM 15 C C3' LMT . . . D 4 6.896 30.523 58.591 1 98.53 ? C3' LMT 801 A 1 HETATM 16 C C4' LMT . . . D 4 7.927 30.113 59.62 1 102.23 ? C4' LMT 801 A 1 HETATM 17 C C5' LMT . . . D 4 7.915 30.867 60.961 1 109.06 ? C5' LMT 801 A 1 HETATM 18 C C6' LMT . . . D 4 9.303 31.318 61.229 1 105.69 ? C6' LMT 801 A 1 HETATM 19 O O1' LMT . . . D 4 5.096 33.159 60.251 1 116.86 ? O1' LMT 801 A 1 HETATM 20 O O2' LMT . . . D 4 4.539 30.25 59.193 1 109.31 ? O2' LMT 801 A 1 HETATM 21 O O3' LMT . . . D 4 7.54 31.377 57.599 1 95.34 ? O3' LMT 801 A 1 HETATM 22 O O5' LMT . . . D 4 7.161 32.139 60.876 1 115.91 ? O5' LMT 801 A 1 HETATM 23 O O6' LMT . . . D 4 9.421 32.593 60.631 1 107.51 ? O6' LMT 801 A 1 HETATM 24 C C1 LMT . . . D 4 5.937 34.235 59.891 1 113.03 ? C1 LMT 801 A 1 HETATM 25 C C2 LMT . . . D 4 5.122 35.285 59.101 1 104.96 ? C2 LMT 801 A 1 HETATM 26 C C3 LMT . . . D 4 5.051 34.884 57.628 1 96.8 ? C3 LMT 801 A 1 HETATM 27 C C4 LMT . . . D 4 6.428 34.336 57.156 1 94.1 ? C4 LMT 801 A 1 HETATM 28 C C5 LMT . . . D 4 7.133 35.36 56.237 1 89.85 ? C5 LMT 801 A 1 HETATM 29 C C6 LMT . . . D 4 7.095 34.862 54.747 1 84.76 ? C6 LMT 801 A 1 HETATM 30 C C7 LMT . . . D 4 8.441 34.244 54.288 1 73.18 ? C7 LMT 801 A 1 HETATM 31 C C8 LMT . . . D 4 9.166 35.251 53.359 1 71.29 ? C8 LMT 801 A 1 HETATM 32 C C9 LMT . . . D 4 9.546 34.546 52.021 1 76.22 ? C9 LMT 801 A 1 HETATM 33 C C10 LMT . . . D 4 10.937 33.899 52.111 1 79.03 ? C10 LMT 801 A 1 HETATM 34 C C11 LMT . . . D 4 11.724 34.04 50.777 1 84.43 ? C11 LMT 801 A 1 HETATM 35 C C12 LMT . . . D 4 13.144 33.44 50.912 1 77.68 ? C12 LMT 801 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 261 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 35 #