data_8B1D # _model_server_result.job_id Yfpe6mrUD3-py7Jd8aAJuw _model_server_result.datetime_utc '2025-04-22 03:20:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8b1d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":811}' # _entry.id 8B1D # _exptl.entry_id 8B1D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.278 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PENTAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8B1D _cell.length_a 54.759 _cell.length_b 125.156 _cell.length_c 169.9 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8B1D _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall 'P 2 2ab (z,x,y)' _symmetry.space_group_name_H-M 'P 2 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 G N N ? 7 N N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 21 _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 22 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 94 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 95 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.05 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C10 H22 O6' _chem_comp.formula_weight 238.278 _chem_comp.id 1PE _chem_comp.mon_nstd_flag . _chem_comp.name 'PENTAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms PEG400 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OH2 C12 1PE sing 1 n n OH2 HO2 1PE sing 2 n n C12 C22 1PE sing 3 n n C12 H121 1PE sing 4 n n C12 H122 1PE sing 5 n n C22 OH3 1PE sing 6 n n C22 H221 1PE sing 7 n n C22 H222 1PE sing 8 n n OH3 C23 1PE sing 9 n n C13 C23 1PE sing 10 n n C13 OH4 1PE sing 11 n n C13 H131 1PE sing 12 n n C13 H132 1PE sing 13 n n C23 H231 1PE sing 14 n n C23 H232 1PE sing 15 n n OH4 C24 1PE sing 16 n n C14 C24 1PE sing 17 n n C14 OH5 1PE sing 18 n n C14 H141 1PE sing 19 n n C14 H142 1PE sing 20 n n C24 H241 1PE sing 21 n n C24 H242 1PE sing 22 n n OH5 C25 1PE sing 23 n n C15 C25 1PE sing 24 n n C15 OH6 1PE sing 25 n n C15 H151 1PE sing 26 n n C15 H152 1PE sing 27 n n C25 H251 1PE sing 28 n n C25 H252 1PE sing 29 n n OH6 C26 1PE sing 30 n n C16 C26 1PE sing 31 n n C16 OH7 1PE sing 32 n n C16 H161 1PE sing 33 n n C16 H162 1PE sing 34 n n C26 H261 1PE sing 35 n n C26 H262 1PE sing 36 n n OH7 HO7 1PE sing 37 n n # _atom_sites.entry_id 8B1D _atom_sites.fract_transf_matrix[1][1] 0.018262 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00799 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005886 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 LMT A 1 801 801 LMT LMT . E 5 OCT A 1 802 1101 OCT OCT . F 6 PG4 A 1 803 1201 PG4 PG4 . G 7 1PE A 1 804 1301 1PE 1PE . H 6 PG4 A 1 805 1701 PG4 PG4 . I 6 PG4 A 1 806 1801 PG4 PG4 . J 6 PG4 A 1 807 1901 PG4 PG4 . K 6 PG4 A 1 808 2001 PG4 PG4 . L 8 D12 A 1 809 2101 D12 D12 . M 9 GOL A 1 810 2201 GOL GOL . N 7 1PE A 1 811 2301 1PE 1PE . O 10 D10 A 1 812 2401 D10 D10 . P 9 GOL A 1 813 2501 GOL GOL . Q 11 HEX A 1 814 1 HEX HEX . R 11 HEX A 1 815 2 HEX HEX . S 12 HOH A 1 901 95 HOH HOH . S 12 HOH A 2 902 82 HOH HOH . S 12 HOH A 3 903 116 HOH HOH . S 12 HOH A 4 904 42 HOH HOH . S 12 HOH A 5 905 14 HOH HOH . S 12 HOH A 6 906 11 HOH HOH . S 12 HOH A 7 907 106 HOH HOH . S 12 HOH A 8 908 110 HOH HOH . S 12 HOH A 9 909 72 HOH HOH . S 12 HOH A 10 910 131 HOH HOH . S 12 HOH A 11 911 35 HOH HOH . S 12 HOH A 12 912 108 HOH HOH . S 12 HOH A 13 913 2 HOH HOH . S 12 HOH A 14 914 104 HOH HOH . S 12 HOH A 15 915 49 HOH HOH . S 12 HOH A 16 916 124 HOH HOH . S 12 HOH A 17 917 90 HOH HOH . S 12 HOH A 18 918 71 HOH HOH . S 12 HOH A 19 919 7 HOH HOH . S 12 HOH A 20 920 26 HOH HOH . S 12 HOH A 21 921 30 HOH HOH . S 12 HOH A 22 922 31 HOH HOH . S 12 HOH A 23 923 10 HOH HOH . S 12 HOH A 24 924 18 HOH HOH . S 12 HOH A 25 925 47 HOH HOH . S 12 HOH A 26 926 60 HOH HOH . S 12 HOH A 27 927 38 HOH HOH . S 12 HOH A 28 928 16 HOH HOH . S 12 HOH A 29 929 130 HOH HOH . S 12 HOH A 30 930 83 HOH HOH . S 12 HOH A 31 931 111 HOH HOH . S 12 HOH A 32 932 56 HOH HOH . S 12 HOH A 33 933 21 HOH HOH . S 12 HOH A 34 934 17 HOH HOH . S 12 HOH A 35 935 12 HOH HOH . S 12 HOH A 36 936 75 HOH HOH . S 12 HOH A 37 937 32 HOH HOH . S 12 HOH A 38 938 117 HOH HOH . S 12 HOH A 39 939 73 HOH HOH . S 12 HOH A 40 940 37 HOH HOH . S 12 HOH A 41 941 40 HOH HOH . S 12 HOH A 42 942 45 HOH HOH . S 12 HOH A 43 943 84 HOH HOH . S 12 HOH A 44 944 64 HOH HOH . S 12 HOH A 45 945 24 HOH HOH . S 12 HOH A 46 946 120 HOH HOH . S 12 HOH A 47 947 25 HOH HOH . S 12 HOH A 48 948 74 HOH HOH . S 12 HOH A 49 949 67 HOH HOH . S 12 HOH A 50 950 23 HOH HOH . S 12 HOH A 51 951 41 HOH HOH . S 12 HOH A 52 952 13 HOH HOH . S 12 HOH A 53 953 79 HOH HOH . S 12 HOH A 54 954 88 HOH HOH . S 12 HOH A 55 955 15 HOH HOH . S 12 HOH A 56 956 134 HOH HOH . S 12 HOH A 57 957 53 HOH HOH . S 12 HOH A 58 958 118 HOH HOH . S 12 HOH A 59 959 80 HOH HOH . S 12 HOH A 60 960 105 HOH HOH . S 12 HOH A 61 961 81 HOH HOH . S 12 HOH A 62 962 119 HOH HOH . S 12 HOH A 63 963 78 HOH HOH . S 12 HOH A 64 964 126 HOH HOH . S 12 HOH A 65 965 121 HOH HOH . S 12 HOH A 66 966 122 HOH HOH . S 12 HOH A 67 967 66 HOH HOH . S 12 HOH A 68 968 99 HOH HOH . S 12 HOH A 69 969 123 HOH HOH . S 12 HOH A 70 970 100 HOH HOH . S 12 HOH A 71 971 127 HOH HOH . T 12 HOH B 1 201 107 HOH HOH . T 12 HOH B 2 202 33 HOH HOH . T 12 HOH B 3 203 46 HOH HOH . T 12 HOH B 4 204 70 HOH HOH . T 12 HOH B 5 205 61 HOH HOH . T 12 HOH B 6 206 19 HOH HOH . T 12 HOH B 7 207 133 HOH HOH . T 12 HOH B 8 208 44 HOH HOH . T 12 HOH B 9 209 3 HOH HOH . T 12 HOH B 10 210 22 HOH HOH . T 12 HOH B 11 211 5 HOH HOH . T 12 HOH B 12 212 1 HOH HOH . T 12 HOH B 13 213 8 HOH HOH . T 12 HOH B 14 214 59 HOH HOH . T 12 HOH B 15 215 9 HOH HOH . T 12 HOH B 16 216 39 HOH HOH . T 12 HOH B 17 217 92 HOH HOH . T 12 HOH B 18 218 63 HOH HOH . T 12 HOH B 19 219 89 HOH HOH . T 12 HOH B 20 220 6 HOH HOH . T 12 HOH B 21 221 36 HOH HOH . T 12 HOH B 22 222 28 HOH HOH . T 12 HOH B 23 223 20 HOH HOH . T 12 HOH B 24 224 58 HOH HOH . T 12 HOH B 25 225 55 HOH HOH . T 12 HOH B 26 226 54 HOH HOH . T 12 HOH B 27 227 62 HOH HOH . T 12 HOH B 28 228 27 HOH HOH . T 12 HOH B 29 229 52 HOH HOH . T 12 HOH B 30 230 97 HOH HOH . T 12 HOH B 31 231 69 HOH HOH . T 12 HOH B 32 232 4 HOH HOH . T 12 HOH B 33 233 43 HOH HOH . T 12 HOH B 34 234 94 HOH HOH . T 12 HOH B 35 235 101 HOH HOH . T 12 HOH B 36 236 87 HOH HOH . T 12 HOH B 37 237 114 HOH HOH . T 12 HOH B 38 238 109 HOH HOH . T 12 HOH B 39 239 29 HOH HOH . T 12 HOH B 40 240 103 HOH HOH . T 12 HOH B 41 241 98 HOH HOH . T 12 HOH B 42 242 115 HOH HOH . T 12 HOH B 43 243 86 HOH HOH . T 12 HOH B 44 244 50 HOH HOH . T 12 HOH B 45 245 112 HOH HOH . T 12 HOH B 46 246 51 HOH HOH . T 12 HOH B 47 247 91 HOH HOH . T 12 HOH B 48 248 96 HOH HOH . T 12 HOH B 49 249 48 HOH HOH . T 12 HOH B 50 250 68 HOH HOH . T 12 HOH B 51 251 65 HOH HOH . T 12 HOH B 52 252 93 HOH HOH . T 12 HOH B 53 253 57 HOH HOH . T 12 HOH B 54 254 102 HOH HOH . U 12 HOH C 1 101 135 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OH2 1PE . . . N 7 -24.654 -50.932 27.75 1 92.22 ? OH2 1PE 811 A 1 HETATM 2 C C12 1PE . . . N 7 -23.36 -50.8 27.162 1 94.95 ? C12 1PE 811 A 1 HETATM 3 C C22 1PE . . . N 7 -23.357 -49.765 26.075 1 89.52 ? C22 1PE 811 A 1 HETATM 4 O OH3 1PE . . . N 7 -22.108 -49.77 25.393 1 88.02 ? OH3 1PE 811 A 1 HETATM 5 C C13 1PE . . . N 7 -21.959 -47.73 24.13 1 82 ? C13 1PE 811 A 1 HETATM 6 C C23 1PE . . . N 7 -21.508 -48.481 25.34 1 80.48 ? C23 1PE 811 A 1 HETATM 7 O OH4 1PE . . . N 7 -21.873 -46.331 24.381 1 81.96 ? OH4 1PE 811 A 1 HETATM 8 C C14 1PE . . . N 7 -22.425 -44.101 23.731 1 79.78 ? C14 1PE 811 A 1 HETATM 9 C C24 1PE . . . N 7 -22.393 -45.537 23.322 1 82.53 ? C24 1PE 811 A 1 HETATM 10 O OH5 1PE . . . N 7 -23.53 -43.446 23.125 1 85.66 ? OH5 1PE 811 A 1 HETATM 11 C C15 1PE . . . N 7 -22.936 -41.908 21.458 1 82.61 ? C15 1PE 811 A 1 HETATM 12 C C25 1PE . . . N 7 -23.307 -42.062 22.891 1 79.79 ? C25 1PE 811 A 1 HETATM 13 O OH6 1PE . . . N 7 -23.192 -40.6 20.973 1 84.99 ? OH6 1PE 811 A 1 HETATM 14 C C16 1PE . . . N 7 -22.332 -38.945 19.444 1 91.09 ? C16 1PE 811 A 1 HETATM 15 C C26 1PE . . . N 7 -22.016 -40.072 20.375 1 88.35 ? C26 1PE 811 A 1 HETATM 16 O OH7 1PE . . . N 7 -21.145 -38.248 19.083 1 94.14 ? OH7 1PE 811 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 535 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 16 #