data_8B1I # _model_server_result.job_id VQNAFts_OFdyge9iAhbl1A _model_server_result.datetime_utc '2024-10-25 20:24:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8b1i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":809}' # _entry.id 8B1I # _exptl.entry_id 8B1I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 170.335 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECANE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8B1I _cell.length_a 54.183 _cell.length_b 124.675 _cell.length_c 167.463 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8B1I _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall 'P 2 2ab (z,x,y)' _symmetry.space_group_name_H-M 'P 2 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 8 _struct_asym.id L _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 21 _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 22 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 94 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 95 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.078 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C12 H26' _chem_comp.formula_weight 170.335 _chem_comp.id D12 _chem_comp.mon_nstd_flag . _chem_comp.name DODECANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8B1I _atom_sites.fract_transf_matrix[1][1] 0.018456 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008021 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005971 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 LMT A 1 801 801 LMT LMT . E 5 OCT A 1 802 1101 OCT OCT . F 6 PG4 A 1 803 1201 PG4 PG4 . G 7 1PE A 1 804 1301 1PE 1PE . H 6 PG4 A 1 805 1701 PG4 PG4 . I 6 PG4 A 1 806 1801 PG4 PG4 . J 6 PG4 A 1 807 1901 PG4 PG4 . K 6 PG4 A 1 808 2001 PG4 PG4 . L 8 D12 A 1 809 2101 D12 D12 . M 9 GOL A 1 810 2201 GOL GOL . N 7 1PE A 1 811 2301 1PE 1PE . O 10 D10 A 1 812 2401 D10 D10 . P 9 GOL A 1 813 2501 GOL GOL . Q 11 HEX A 1 814 1 HEX HEX . R 11 HEX A 1 815 2 HEX HEX . S 12 HOH A 1 901 95 HOH HOH . S 12 HOH A 2 902 129 HOH HOH . S 12 HOH A 3 903 32 HOH HOH . S 12 HOH A 4 904 124 HOH HOH . S 12 HOH A 5 905 136 HOH HOH . S 12 HOH A 6 906 82 HOH HOH . S 12 HOH A 7 907 40 HOH HOH . S 12 HOH A 8 908 106 HOH HOH . S 12 HOH A 9 909 30 HOH HOH . S 12 HOH A 10 910 71 HOH HOH . S 12 HOH A 11 911 110 HOH HOH . S 12 HOH A 12 912 25 HOH HOH . S 12 HOH A 13 913 35 HOH HOH . S 12 HOH A 14 914 38 HOH HOH . S 12 HOH A 15 915 49 HOH HOH . S 12 HOH A 16 916 10 HOH HOH . S 12 HOH A 17 917 56 HOH HOH . S 12 HOH A 18 918 104 HOH HOH . S 12 HOH A 19 919 84 HOH HOH . S 12 HOH A 20 920 2 HOH HOH . S 12 HOH A 21 921 26 HOH HOH . S 12 HOH A 22 922 11 HOH HOH . S 12 HOH A 23 923 14 HOH HOH . S 12 HOH A 24 924 7 HOH HOH . S 12 HOH A 25 925 45 HOH HOH . S 12 HOH A 26 926 131 HOH HOH . S 12 HOH A 27 927 21 HOH HOH . S 12 HOH A 28 928 12 HOH HOH . S 12 HOH A 29 929 18 HOH HOH . S 12 HOH A 30 930 89 HOH HOH . S 12 HOH A 31 931 73 HOH HOH . S 12 HOH A 32 932 13 HOH HOH . S 12 HOH A 33 933 37 HOH HOH . S 12 HOH A 34 934 83 HOH HOH . S 12 HOH A 35 935 111 HOH HOH . S 12 HOH A 36 936 31 HOH HOH . S 12 HOH A 37 937 130 HOH HOH . S 12 HOH A 38 938 41 HOH HOH . S 12 HOH A 39 939 17 HOH HOH . S 12 HOH A 40 940 75 HOH HOH . S 12 HOH A 41 941 15 HOH HOH . S 12 HOH A 42 942 64 HOH HOH . S 12 HOH A 43 943 24 HOH HOH . S 12 HOH A 44 944 60 HOH HOH . S 12 HOH A 45 945 79 HOH HOH . S 12 HOH A 46 946 27 HOH HOH . S 12 HOH A 47 947 78 HOH HOH . S 12 HOH A 48 948 23 HOH HOH . S 12 HOH A 49 949 134 HOH HOH . S 12 HOH A 50 950 74 HOH HOH . S 12 HOH A 51 951 66 HOH HOH . S 12 HOH A 52 952 72 HOH HOH . S 12 HOH A 53 953 90 HOH HOH . S 12 HOH A 54 954 67 HOH HOH . S 12 HOH A 55 955 117 HOH HOH . S 12 HOH A 56 956 135 HOH HOH . S 12 HOH A 57 957 53 HOH HOH . S 12 HOH A 58 958 80 HOH HOH . S 12 HOH A 59 959 105 HOH HOH . S 12 HOH A 60 960 119 HOH HOH . S 12 HOH A 61 961 120 HOH HOH . S 12 HOH A 62 962 88 HOH HOH . S 12 HOH A 63 963 118 HOH HOH . S 12 HOH A 64 964 126 HOH HOH . S 12 HOH A 65 965 108 HOH HOH . S 12 HOH A 66 966 50 HOH HOH . S 12 HOH A 67 967 128 HOH HOH . S 12 HOH A 68 968 99 HOH HOH . S 12 HOH A 69 969 122 HOH HOH . S 12 HOH A 70 970 121 HOH HOH . S 12 HOH A 71 971 81 HOH HOH . S 12 HOH A 72 972 100 HOH HOH . S 12 HOH A 73 973 123 HOH HOH . S 12 HOH A 74 974 127 HOH HOH . T 12 HOH B 1 201 22 HOH HOH . T 12 HOH B 2 202 33 HOH HOH . T 12 HOH B 3 203 92 HOH HOH . T 12 HOH B 4 204 6 HOH HOH . T 12 HOH B 5 205 1 HOH HOH . T 12 HOH B 6 206 63 HOH HOH . T 12 HOH B 7 207 39 HOH HOH . T 12 HOH B 8 208 28 HOH HOH . T 12 HOH B 9 209 94 HOH HOH . T 12 HOH B 10 210 55 HOH HOH . T 12 HOH B 11 211 36 HOH HOH . T 12 HOH B 12 212 5 HOH HOH . T 12 HOH B 13 213 133 HOH HOH . T 12 HOH B 14 214 62 HOH HOH . T 12 HOH B 15 215 44 HOH HOH . T 12 HOH B 16 216 61 HOH HOH . T 12 HOH B 17 217 59 HOH HOH . T 12 HOH B 18 218 47 HOH HOH . T 12 HOH B 19 219 107 HOH HOH . T 12 HOH B 20 220 29 HOH HOH . T 12 HOH B 21 221 52 HOH HOH . T 12 HOH B 22 222 20 HOH HOH . T 12 HOH B 23 223 70 HOH HOH . T 12 HOH B 24 224 9 HOH HOH . T 12 HOH B 25 225 43 HOH HOH . T 12 HOH B 26 226 46 HOH HOH . T 12 HOH B 27 227 103 HOH HOH . T 12 HOH B 28 228 19 HOH HOH . T 12 HOH B 29 229 98 HOH HOH . T 12 HOH B 30 230 69 HOH HOH . T 12 HOH B 31 231 101 HOH HOH . T 12 HOH B 32 232 8 HOH HOH . T 12 HOH B 33 233 87 HOH HOH . T 12 HOH B 34 234 58 HOH HOH . T 12 HOH B 35 235 3 HOH HOH . T 12 HOH B 36 236 109 HOH HOH . T 12 HOH B 37 237 54 HOH HOH . T 12 HOH B 38 238 4 HOH HOH . T 12 HOH B 39 239 115 HOH HOH . T 12 HOH B 40 240 114 HOH HOH . T 12 HOH B 41 241 112 HOH HOH . T 12 HOH B 42 242 97 HOH HOH . T 12 HOH B 43 243 51 HOH HOH . T 12 HOH B 44 244 86 HOH HOH . T 12 HOH B 45 245 65 HOH HOH . T 12 HOH B 46 246 91 HOH HOH . T 12 HOH B 47 247 93 HOH HOH . T 12 HOH B 48 248 68 HOH HOH . T 12 HOH B 49 249 48 HOH HOH . T 12 HOH B 50 250 96 HOH HOH . T 12 HOH B 51 251 102 HOH HOH . T 12 HOH B 52 252 57 HOH HOH . U 12 HOH C 1 101 125 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 D12 . . . L 8 -26.358 34.939 29.553 1 64.75 ? C1 D12 809 A 1 HETATM 2 C C2 D12 . . . L 8 -26.877 35.892 30.651 1 76.05 ? C2 D12 809 A 1 HETATM 3 C C3 D12 . . . L 8 -27.271 37.311 30.183 1 65.8 ? C3 D12 809 A 1 HETATM 4 C C4 D12 . . . L 8 -27.058 38.335 31.321 1 69.68 ? C4 D12 809 A 1 HETATM 5 C C5 D12 . . . L 8 -26.991 39.784 30.81 1 67.44 ? C5 D12 809 A 1 HETATM 6 C C6 D12 . . . L 8 -26.074 40.652 31.688 1 72.1 ? C6 D12 809 A 1 HETATM 7 C C7 D12 . . . L 8 -26.457 42.139 31.582 1 74.19 ? C7 D12 809 A 1 HETATM 8 C C8 D12 . . . L 8 -25.528 43.069 32.389 1 68.97 ? C8 D12 809 A 1 HETATM 9 C C9 D12 . . . L 8 -25.757 44.51 31.899 1 77.43 ? C9 D12 809 A 1 HETATM 10 C C10 D12 . . . L 8 -24.947 45.572 32.661 1 80.56 ? C10 D12 809 A 1 HETATM 11 C C11 D12 . . . L 8 -25.218 46.971 32.077 1 74.48 ? C11 D12 809 A 1 HETATM 12 C C12 D12 . . . L 8 -24.13 47.967 32.48 1 68.12 ? C12 D12 809 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 12 #