data_8B21 # _model_server_result.job_id P3-G0JUhRrrOG2aDBJRhBQ _model_server_result.datetime_utc '2024-10-19 20:19:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8b21 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Y","auth_seq_id":814}' # _entry.id 8B21 # _exptl.entry_id 8B21 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.03 _cell.angle_gamma 90 _cell.entry_id 8B21 _cell.length_a 84.022 _cell.length_b 110.051 _cell.length_c 107.405 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8B21 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 H N N ? 5 I N N ? 5 K N N ? 5 W N N ? 5 X N N ? 5 Y N N # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 335 n n O1 HO1 PG4 sing 336 n n C1 C2 PG4 sing 337 n n C1 H11 PG4 sing 338 n n C1 H12 PG4 sing 339 n n C2 O2 PG4 sing 340 n n C2 H21 PG4 sing 341 n n C2 H22 PG4 sing 342 n n O2 C3 PG4 sing 343 n n C3 C4 PG4 sing 344 n n C3 H31 PG4 sing 345 n n C3 H32 PG4 sing 346 n n C4 O3 PG4 sing 347 n n C4 H41 PG4 sing 348 n n C4 H42 PG4 sing 349 n n O3 C5 PG4 sing 350 n n C5 C6 PG4 sing 351 n n C5 H51 PG4 sing 352 n n C5 H52 PG4 sing 353 n n C6 O4 PG4 sing 354 n n C6 H61 PG4 sing 355 n n C6 H62 PG4 sing 356 n n O4 C7 PG4 sing 357 n n C7 C8 PG4 sing 358 n n C7 H71 PG4 sing 359 n n C7 H72 PG4 sing 360 n n C8 O5 PG4 sing 361 n n C8 H81 PG4 sing 362 n n C8 H82 PG4 sing 363 n n O5 HO5 PG4 sing 364 n n # _atom_sites.entry_id 8B21 _atom_sites.fract_transf_matrix[1][1] 0.011902 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003874 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009087 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009791 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 LMT A 1 801 804 LMT LMT . D 3 PEG A 1 802 805 PEG PEG . E 3 PEG A 1 803 811 PEG PEG . F 4 PGE A 1 804 812 PGE PGE . G 4 PGE A 1 805 813 PGE PGE . H 5 PG4 A 1 806 814 PG4 PG4 . I 5 PG4 A 1 807 815 PG4 PG4 . J 4 PGE A 1 808 811 PGE PGE . K 5 PG4 A 1 809 812 PG4 PG4 . L 3 PEG B 1 801 806 PEG PEG . M 3 PEG B 1 802 807 PEG PEG . N 3 PEG B 1 803 810 PEG PEG . O 3 PEG B 1 804 803 PEG PEG . P 3 PEG B 1 805 804 PEG PEG . Q 3 PEG B 1 806 805 PEG PEG . R 3 PEG B 1 807 806 PEG PEG . S 3 PEG B 1 808 807 PEG PEG . T 3 PEG B 1 809 808 PEG PEG . U 3 PEG B 1 810 809 PEG PEG . V 3 PEG B 1 811 810 PEG PEG . W 5 PG4 B 1 812 813 PG4 PG4 . X 5 PG4 B 1 813 814 PG4 PG4 . Y 5 PG4 B 1 814 815 PG4 PG4 . Z 6 HOH B 1 901 3 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . Y 5 19.382 34.014 -26.209 1 87.15 ? O1 PG4 814 B 1 HETATM 2 C C1 PG4 . . . Y 5 18.775 35.271 -26.276 1 87.15 ? C1 PG4 814 B 1 HETATM 3 C C2 PG4 . . . Y 5 19.563 36.012 -27.383 1 87.15 ? C2 PG4 814 B 1 HETATM 4 O O2 PG4 . . . Y 5 20.041 37.204 -26.784 1 87.15 ? O2 PG4 814 B 1 HETATM 5 C C3 PG4 . . . Y 5 20.775 38.026 -27.685 1 87.15 ? C3 PG4 814 B 1 HETATM 6 C C4 PG4 . . . Y 5 19.778 39.122 -28.125 1 87.15 ? C4 PG4 814 B 1 HETATM 7 O O3 PG4 . . . Y 5 20.308 39.685 -29.307 1 87.15 ? O3 PG4 814 B 1 HETATM 8 C C5 PG4 . . . Y 5 19.33 40.266 -30.154 1 87.15 ? C5 PG4 814 B 1 HETATM 9 C C6 PG4 . . . Y 5 18.926 39.162 -31.152 1 87.15 ? C6 PG4 814 B 1 HETATM 10 O O4 PG4 . . . Y 5 20.138 38.501 -31.508 1 87.15 ? O4 PG4 814 B 1 HETATM 11 C C7 PG4 . . . Y 5 19.915 37.283 -32.206 1 87.15 ? C7 PG4 814 B 1 HETATM 12 C C8 PG4 . . . Y 5 19.789 36.18 -31.119 1 87.15 ? C8 PG4 814 B 1 HETATM 13 O O5 PG4 . . . Y 5 18.511 35.615 -31.321 1 87.15 ? O5 PG4 814 B 1 HETATM 14 H HO1 PG4 . . . Y 5 19.822 33.957 -25.36 1 33.18 ? HO1 PG4 814 B 1 HETATM 15 H H11 PG4 . . . Y 5 17.693 35.194 -26.522 1 33.18 ? H11 PG4 814 B 1 HETATM 16 H H12 PG4 . . . Y 5 18.828 35.808 -25.304 1 33.18 ? H12 PG4 814 B 1 HETATM 17 H H21 PG4 . . . Y 5 18.907 36.225 -28.256 1 33.18 ? H21 PG4 814 B 1 HETATM 18 H H22 PG4 . . . Y 5 20.395 35.38 -27.762 1 33.18 ? H22 PG4 814 B 1 HETATM 19 H H31 PG4 . . . Y 5 21.671 38.458 -27.191 1 33.18 ? H31 PG4 814 B 1 HETATM 20 H H32 PG4 . . . Y 5 21.148 37.436 -28.55 1 33.18 ? H32 PG4 814 B 1 HETATM 21 H H41 PG4 . . . Y 5 18.765 38.684 -28.288 1 33.18 ? H41 PG4 814 B 1 HETATM 22 H H42 PG4 . . . Y 5 19.654 39.882 -27.319 1 33.18 ? H42 PG4 814 B 1 HETATM 23 H H51 PG4 . . . Y 5 19.723 41.159 -30.694 1 33.18 ? H51 PG4 814 B 1 HETATM 24 H H52 PG4 . . . Y 5 18.442 40.622 -29.582 1 33.18 ? H52 PG4 814 B 1 HETATM 25 H H61 PG4 . . . Y 5 18.427 39.587 -32.049 1 33.18 ? H61 PG4 814 B 1 HETATM 26 H H62 PG4 . . . Y 5 18.202 38.45 -30.701 1 33.18 ? H62 PG4 814 B 1 HETATM 27 H H71 PG4 . . . Y 5 18.993 37.329 -32.825 1 33.18 ? H71 PG4 814 B 1 HETATM 28 H H72 PG4 . . . Y 5 20.75 37.052 -32.903 1 33.18 ? H72 PG4 814 B 1 HETATM 29 H H81 PG4 . . . Y 5 20.601 35.425 -31.22 1 33.18 ? H81 PG4 814 B 1 HETATM 30 H H82 PG4 . . . Y 5 19.9 36.611 -30.099 1 33.18 ? H82 PG4 814 B 1 HETATM 31 H HO5 PG4 . . . Y 5 17.962 35.872 -30.574 1 33.18 ? HO5 PG4 814 B 1 # _model_server_stats.io_time_ms 55 _model_server_stats.parse_time_ms 32 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 31 #