data_8B64 # _model_server_result.job_id kR0Xd7v3wDpdFxPqI4PRoA _model_server_result.datetime_utc '2024-10-10 23:26:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8b64 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"BC","auth_seq_id":102}' # _entry.id 8B64 # _exptl.entry_id 8B64 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 568.914 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description SPHEROIDENE _entity.pdbx_number_of_molecules 27 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8B64 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8B64 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 34-meric _pdbx_struct_assembly.oligomeric_count 34 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB,VB,WB,XB,YB,ZB,AC,BC,CC,DC,EC,FC,GC,HC,IC,JC,KC,LC,MC,NC,OC,PC,QC,RC,SC,TC,UC,VC,WC,XC,YC,ZC,AD,BD,CD,DD,ED _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 8 MA N N ? 8 PA N N ? 8 QA N N ? 8 SA N N ? 8 TA N N ? 8 UA N N ? 8 EB N N ? 8 NB N N ? 8 QB N N ? 8 SB N N ? 8 TB N N ? 8 UB N N ? 8 BC N N ? 8 EC N N ? 8 FC N N ? 8 HC N N ? 8 KC N N ? 8 MC N N ? 8 NC N N ? 8 PC N N ? 8 RC N N ? 8 TC N N ? 8 UC N N ? 8 XC N N ? 8 AD N N ? 8 CD N N ? 8 ED N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 H NE2 HIS 191 L HIS 190 1_555 CB FE FE . M FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? metalc ? metalc2 H NE2 HIS 231 L HIS 230 1_555 CB FE FE . M FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.678 ? metalc ? metalc3 I NE2 HIS 218 M HIS 217 1_555 CB FE FE . M FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? metalc ? metalc4 I OE2 GLU 233 M GLU 232 1_555 CB FE FE . M FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.981 ? metalc ? metalc5 I NE2 HIS 265 M HIS 264 1_555 CB FE FE . M FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? # _chem_comp.formula 'C41 H60 O' _chem_comp.formula_weight 568.914 _chem_comp.id SPO _chem_comp.mon_nstd_flag . _chem_comp.name SPHEROIDENE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CM1 O1 SPO sing 714 n n CM1 HM11 SPO sing 715 n n CM1 HM12 SPO sing 716 n n CM1 HM13 SPO sing 717 n n O1 C1 SPO sing 718 n n C1 C2 SPO sing 719 n n C1 C3 SPO sing 720 n n C1 C4 SPO sing 721 n n C2 H21A SPO sing 722 n n C2 H22A SPO sing 723 n n C2 H23 SPO sing 724 n n C3 H31 SPO sing 725 n n C3 H32A SPO sing 726 n n C3 H33 SPO sing 727 n n C4 C5 SPO sing 728 n n C4 H41 SPO sing 729 n n C4 H42 SPO sing 730 n n C5 C6 SPO doub 731 e n C5 H5 SPO sing 732 n n C6 C7 SPO sing 733 n n C6 H6 SPO sing 734 n n C7 C8 SPO sing 735 n n C7 C9 SPO doub 736 e n C8 H81 SPO sing 737 n n C8 H82 SPO sing 738 n n C8 H83 SPO sing 739 n n C9 C10 SPO sing 740 n n C9 H9 SPO sing 741 n n C10 C11 SPO doub 742 e n C10 H10 SPO sing 743 n n C11 C12 SPO sing 744 n n C11 H11 SPO sing 745 n n C12 C13 SPO sing 746 n n C12 C14 SPO doub 747 e n C13 H131 SPO sing 748 n n C13 H132 SPO sing 749 n n C13 H133 SPO sing 750 n n C14 C15 SPO sing 751 n n C14 H14 SPO sing 752 n n C15 C16 SPO doub 753 e n C15 H15 SPO sing 754 n n C16 C17 SPO sing 755 n n C16 H16 SPO sing 756 n n C17 C18 SPO sing 757 n n C17 C19 SPO doub 758 z n C18 H181 SPO sing 759 n n C18 H182 SPO sing 760 n n C18 H183 SPO sing 761 n n C19 C20 SPO sing 762 n n C19 H19 SPO sing 763 n n C20 C21 SPO doub 764 e n C20 H20 SPO sing 765 n n C21 C22 SPO sing 766 n n C21 H21 SPO sing 767 n n C22 C23 SPO doub 768 e n C22 H22 SPO sing 769 n n C23 C24 SPO sing 770 n n C23 C25 SPO sing 771 n n C24 H241 SPO sing 772 n n C24 H242 SPO sing 773 n n C24 H243 SPO sing 774 n n C25 C26 SPO doub 775 e n C25 H25 SPO sing 776 n n C26 C27 SPO sing 777 n n C26 H26 SPO sing 778 n n C27 C28 SPO doub 779 e n C27 H27 SPO sing 780 n n C28 C29 SPO sing 781 n n C28 C30 SPO sing 782 n n C29 H291 SPO sing 783 n n C29 H292 SPO sing 784 n n C29 H293 SPO sing 785 n n C30 C31 SPO sing 786 n n C30 H301 SPO sing 787 n n C30 H302 SPO sing 788 n n C31 C32 SPO sing 789 n n C31 H311 SPO sing 790 n n C31 H312 SPO sing 791 n n C32 C33 SPO doub 792 e n C32 H32 SPO sing 793 n n C33 C34 SPO sing 794 n n C33 C35 SPO sing 795 n n C34 H341 SPO sing 796 n n C34 H342 SPO sing 797 n n C34 H343 SPO sing 798 n n C35 C36 SPO sing 799 n n C35 H351 SPO sing 800 n n C35 H352 SPO sing 801 n n C36 C37 SPO sing 802 n n C36 H361 SPO sing 803 n n C36 H362 SPO sing 804 n n C37 C38 SPO doub 805 n n C37 H37 SPO sing 806 n n C38 C39 SPO sing 807 n n C38 C40 SPO sing 808 n n C39 H391 SPO sing 809 n n C39 H392 SPO sing 810 n n C39 H393 SPO sing 811 n n C40 H401 SPO sing 812 n n C40 H402 SPO sing 813 n n C40 H403 SPO sing 814 n n # _atom_sites.entry_id 8B64 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code IA 7 BCL a 1 100 100 BCL BCL . JA 7 BCL e 1 101 100 BCL BCL . KA 7 BCL e 1 102 99 BCL BCL . LA 7 BCL D 1 101 99 BCL BCL . MA 8 SPO D 1 102 100 SPO SPO . NA 7 BCL b 1 101 100 BCL BCL . OA 7 BCL b 1 102 99 BCL BCL . PA 8 SPO b 1 103 200 SPO SPO . QA 8 SPO A 1 201 201 SPO SPO . RA 7 BCL A 1 202 99 BCL BCL . SA 8 SPO E 1 201 201 SPO SPO . TA 8 SPO E 1 202 202 SPO SPO . UA 8 SPO E 1 203 202 SPO SPO . VA 7 BCL L 1 301 851 BCL BCL . WA 9 BPH L 1 302 855 BPH BPH . XA 10 U10 L 1 303 901 U10 U10 . YA 10 U10 L 1 304 1001 U10 U10 . ZA 10 U10 L 1 305 2394 U10 U10 . AB 11 3PE L 1 306 304 3PE PEH . BB 7 BCL M 1 401 853 BCL BCL . CB 12 FE M 1 402 850 FE FE . DB 10 U10 M 1 403 850 U10 U10 . EB 8 SPO M 1 404 2094 SPO SPO . FB 7 BCL M 1 405 2194 BCL BCL . GB 11 3PE M 1 406 2494 3PE PEH . HB 7 BCL M 1 407 2495 BCL BCL . IB 9 BPH M 1 408 2496 BPH BPH . JB 11 3PE M 1 409 2497 3PE PEH . KB 11 3PE H 1 301 2498 3PE PEH . LB 11 3PE H 1 302 303 3PE PEH . MB 7 BCL d 1 101 100 BCL BCL . NB 8 SPO d 1 102 201 SPO SPO . OB 11 3PE d 1 103 301 3PE PEH . PB 11 3PE d 1 104 302 3PE PEH . QB 8 SPO B 1 101 101 SPO SPO . RB 7 BCL t 1 101 100 BCL BCL . SB 8 SPO t 1 102 201 SPO SPO . TB 8 SPO S 1 201 201 SPO SPO . UB 8 SPO S 1 202 202 SPO SPO . VB 7 BCL T 1 101 99 BCL BCL . WB 7 BCL s 1 101 99 BCL BCL . XB 7 BCL s 1 102 100 BCL BCL . YB 7 BCL U 1 101 99 BCL BCL . ZB 7 BCL U 1 102 100 BCL BCL . AC 7 BCL r 1 101 100 BCL BCL . BC 8 SPO r 1 102 201 SPO SPO . CC 7 BCL r 1 103 99 BCL BCL . DC 7 BCL O 1 101 99 BCL BCL . EC 8 SPO O 1 102 202 SPO SPO . FC 8 SPO R 1 101 202 SPO SPO . GC 7 BCL o 1 101 100 BCL BCL . HC 8 SPO o 1 102 201 SPO SPO . IC 7 BCL n 1 101 100 BCL BCL . JC 7 BCL n 1 102 99 BCL BCL . KC 8 SPO K 1 101 202 SPO SPO . LC 7 BCL K 1 102 99 BCL BCL . MC 8 SPO K 1 103 202 SPO SPO . NC 8 SPO N 1 201 201 SPO SPO . OC 7 BCL k 1 101 100 BCL BCL . PC 8 SPO k 1 102 201 SPO SPO . QC 7 BCL j 1 101 100 BCL BCL . RC 8 SPO j 1 102 201 SPO SPO . SC 7 BCL I 1 101 99 BCL BCL . TC 8 SPO I 1 102 202 SPO SPO . UC 8 SPO J 1 101 202 SPO SPO . VC 7 BCL J 1 102 99 BCL BCL . WC 7 BCL i 1 101 100 BCL BCL . XC 8 SPO i 1 102 201 SPO SPO . YC 7 BCL g 1 101 100 BCL BCL . ZC 7 BCL g 1 102 99 BCL BCL . AD 8 SPO F 1 101 202 SPO SPO . BD 7 BCL F 1 102 99 BCL BCL . CD 8 SPO G 1 201 201 SPO SPO . DD 7 BCL f 1 101 100 BCL BCL . ED 8 SPO f 1 102 201 SPO SPO . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CM1 SPO . . . BC 8 113.388 104.368 158.584 1 60.01 ? CM1 SPO 102 r 1 HETATM 2 O O1 SPO . . . BC 8 114.331 103.302 158.477 1 61.12 ? O1 SPO 102 r 1 HETATM 3 C C1 SPO . . . BC 8 114.956 102.943 159.701 1 60.03 ? C1 SPO 102 r 1 HETATM 4 C C2 SPO . . . BC 8 115.741 104.16 160.249 1 58.25 ? C2 SPO 102 r 1 HETATM 5 C C3 SPO . . . BC 8 113.876 102.535 160.729 1 57.76 ? C3 SPO 102 r 1 HETATM 6 C C4 SPO . . . BC 8 115.941 101.738 159.464 1 57.34 ? C4 SPO 102 r 1 HETATM 7 C C5 SPO . . . BC 8 116.95 101.642 160.646 1 57.96 ? C5 SPO 102 r 1 HETATM 8 C C6 SPO . . . BC 8 118.082 100.946 160.371 1 56.73 ? C6 SPO 102 r 1 HETATM 9 C C7 SPO . . . BC 8 119.48 100.376 160.824 1 59.87 ? C7 SPO 102 r 1 HETATM 10 C C8 SPO . . . BC 8 120.095 100.29 159.396 1 58.57 ? C8 SPO 102 r 1 HETATM 11 C C9 SPO . . . BC 8 119.924 100.093 162.074 1 60.24 ? C9 SPO 102 r 1 HETATM 12 C C10 SPO . . . BC 8 121.375 99.536 162.3 1 56.62 ? C10 SPO 102 r 1 HETATM 13 C C11 SPO . . . BC 8 121.711 98.355 161.706 1 61.53 ? C11 SPO 102 r 1 HETATM 14 C C12 SPO . . . BC 8 123.097 98.563 162.427 1 61.55 ? C12 SPO 102 r 1 HETATM 15 C C13 SPO . . . BC 8 123.973 98.589 161.137 1 58.6 ? C13 SPO 102 r 1 HETATM 16 C C14 SPO . . . BC 8 123.385 98.659 163.779 1 61.38 ? C14 SPO 102 r 1 HETATM 17 C C15 SPO . . . BC 8 124.89 98.879 164.194 1 60.1 ? C15 SPO 102 r 1 HETATM 18 C C16 SPO . . . BC 8 125.094 100.201 164.204 1 61.02 ? C16 SPO 102 r 1 HETATM 19 C C17 SPO . . . BC 8 126.637 100.105 164.681 1 62.62 ? C17 SPO 102 r 1 HETATM 20 C C18 SPO . . . BC 8 127.276 99.85 163.28 1 60.2 ? C18 SPO 102 r 1 HETATM 21 C C19 SPO . . . BC 8 127.144 100.254 165.922 1 61.57 ? C19 SPO 102 r 1 HETATM 22 C C20 SPO . . . BC 8 128.729 100.167 166.099 1 58.74 ? C20 SPO 102 r 1 HETATM 23 C C21 SPO . . . BC 8 128.982 100.438 167.409 1 60 ? C21 SPO 102 r 1 HETATM 24 C C22 SPO . . . BC 8 130.538 100.324 167.236 1 61.13 ? C22 SPO 102 r 1 HETATM 25 C C23 SPO . . . BC 8 131.029 101.432 167.837 1 60.29 ? C23 SPO 102 r 1 HETATM 26 C C24 SPO . . . BC 8 131.242 102.778 168.575 1 58.08 ? C24 SPO 102 r 1 HETATM 27 C C25 SPO . . . BC 8 132.645 101.418 167.719 1 61.11 ? C25 SPO 102 r 1 HETATM 28 C C26 SPO . . . BC 8 133.219 101.069 168.901 1 60.54 ? C26 SPO 102 r 1 HETATM 29 C C27 SPO . . . BC 8 134.664 101.238 168.28 1 62.04 ? C27 SPO 102 r 1 HETATM 30 C C28 SPO . . . BC 8 135.222 102.407 168.749 1 60.36 ? C28 SPO 102 r 1 HETATM 31 C C29 SPO . . . BC 8 136.309 103.499 168.88 1 59.73 ? C29 SPO 102 r 1 HETATM 32 C C30 SPO . . . BC 8 136.517 102.02 167.867 1 62.98 ? C30 SPO 102 r 1 HETATM 33 C C31 SPO . . . BC 8 137.632 101.254 168.748 1 62.34 ? C31 SPO 102 r 1 HETATM 34 C C32 SPO . . . BC 8 138.532 100.312 167.833 1 62.18 ? C32 SPO 102 r 1 HETATM 35 C C33 SPO . . . BC 8 139.833 100.694 167.529 1 62.37 ? C33 SPO 102 r 1 HETATM 36 C C34 SPO . . . BC 8 140.057 102.061 168.171 1 60.95 ? C34 SPO 102 r 1 HETATM 37 C C35 SPO . . . BC 8 141.345 100.861 166.952 1 63.05 ? C35 SPO 102 r 1 HETATM 38 C C36 SPO . . . BC 8 142.453 100.785 168.092 1 60.55 ? C36 SPO 102 r 1 HETATM 39 C C37 SPO . . . BC 8 143.042 99.343 168.237 1 61.77 ? C37 SPO 102 r 1 HETATM 40 C C38 SPO . . . BC 8 144.253 99.019 167.721 1 63.62 ? C38 SPO 102 r 1 HETATM 41 C C39 SPO . . . BC 8 145.09 100.064 166.954 1 60.07 ? C39 SPO 102 r 1 HETATM 42 C C40 SPO . . . BC 8 144.808 97.588 167.89 1 61.05 ? C40 SPO 102 r 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 264 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 42 #