data_8B64
#
_model_server_result.job_id            Im2dMkYLs8pDN_PKi3vQ-w 
_model_server_result.datetime_utc      '2024-10-10 23:31:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8b64 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"ZA","auth_seq_id":305}' 
#
_entry.id    8B64 
#
_exptl.entry_id    8B64 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              863.343 
_entity.id                          10 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            UBIQUINONE-10 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8B64 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8B64 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    34-meric 
_pdbx_struct_assembly.oligomeric_count      34 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB,VB,WB,XB,YB,ZB,AC,BC,CC,DC,EC,FC,GC,HC,IC,JC,KC,LC,MC,NC,OC,PC,QC,RC,SC,TC,UC,VC,WC,XC,YC,ZC,AD,BD,CD,DD,ED 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 10 XA N N 
? 10 YA N N 
? 10 ZA N N 
? 10 DB N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 H NE2 HIS 191 L HIS 190 1_555 CB FE FE . M FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? 
metalc ? metalc2 H NE2 HIS 231 L HIS 230 1_555 CB FE FE . M FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.678 ? 
metalc ? metalc3 I NE2 HIS 218 M HIS 217 1_555 CB FE FE . M FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? 
metalc ? metalc4 I OE2 GLU 233 M GLU 232 1_555 CB FE FE . M FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.981 ? 
metalc ? metalc5 I NE2 HIS 265 M HIS 264 1_555 CB FE FE . M FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? 
#
_chem_comp.formula           'C59 H90 O4' 
_chem_comp.formula_weight    863.343 
_chem_comp.id                U10 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              UBIQUINONE-10 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'Coenzyme Q10' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 U10 sing 883 n n 
C1 C6 U10 doub 884 n n 
C1 C1M U10 sing 885 n n 
C2 C3 U10 sing 886 n n 
C2 O2 U10 doub 887 n n 
C3 C4 U10 doub 888 n n 
C3 O3 U10 sing 889 n n 
C4 C5 U10 sing 890 n n 
C4 O4 U10 sing 891 n n 
C5 C6 U10 sing 892 n n 
C5 O5 U10 doub 893 n n 
C6 C7 U10 sing 894 n n 
C1M H1M1 U10 sing 895 n n 
C1M H1M2 U10 sing 896 n n 
C1M H1M3 U10 sing 897 n n 
C3M O3 U10 sing 898 n n 
C3M H3M1 U10 sing 899 n n 
C3M H3M2 U10 sing 900 n n 
C3M H3M3 U10 sing 901 n n 
C4M O4 U10 sing 902 n n 
C4M H4M1 U10 sing 903 n n 
C4M H4M2 U10 sing 904 n n 
C4M H4M3 U10 sing 905 n n 
C7 C8 U10 sing 906 n n 
C7 H71 U10 sing 907 n n 
C7 H72 U10 sing 908 n n 
C8 C9 U10 doub 909 e n 
C8 H8 U10 sing 910 n n 
C9 C10 U10 sing 911 n n 
C9 C11 U10 sing 912 n n 
C10 H101 U10 sing 913 n n 
C10 H102 U10 sing 914 n n 
C10 H103 U10 sing 915 n n 
C11 C12 U10 sing 916 n n 
C11 H111 U10 sing 917 n n 
C11 H112 U10 sing 918 n n 
C12 C13 U10 sing 919 n n 
C12 H121 U10 sing 920 n n 
C12 H122 U10 sing 921 n n 
C13 C14 U10 doub 922 e n 
C13 H13 U10 sing 923 n n 
C14 C15 U10 sing 924 n n 
C14 C16 U10 sing 925 n n 
C15 H151 U10 sing 926 n n 
C15 H152 U10 sing 927 n n 
C15 H153 U10 sing 928 n n 
C16 C17 U10 sing 929 n n 
C16 H161 U10 sing 930 n n 
C16 H162 U10 sing 931 n n 
C17 C18 U10 sing 932 n n 
C17 H171 U10 sing 933 n n 
C17 H172 U10 sing 934 n n 
C18 C19 U10 doub 935 e n 
C18 H18 U10 sing 936 n n 
C19 C20 U10 sing 937 n n 
C19 C21 U10 sing 938 n n 
C20 H201 U10 sing 939 n n 
C20 H202 U10 sing 940 n n 
C20 H203 U10 sing 941 n n 
C21 C22 U10 sing 942 n n 
C21 H211 U10 sing 943 n n 
C21 H212 U10 sing 944 n n 
C22 C23 U10 sing 945 n n 
C22 H221 U10 sing 946 n n 
C22 H222 U10 sing 947 n n 
C23 C24 U10 doub 948 e n 
C23 H23 U10 sing 949 n n 
C24 C25 U10 sing 950 n n 
C24 C26 U10 sing 951 n n 
C25 H251 U10 sing 952 n n 
C25 H252 U10 sing 953 n n 
C25 H253 U10 sing 954 n n 
C26 C27 U10 sing 955 n n 
C26 H261 U10 sing 956 n n 
C26 H262 U10 sing 957 n n 
C27 C28 U10 sing 958 n n 
C27 H271 U10 sing 959 n n 
C27 H272 U10 sing 960 n n 
C28 C29 U10 doub 961 e n 
C28 H28 U10 sing 962 n n 
C29 C30 U10 sing 963 n n 
C29 C31 U10 sing 964 n n 
C30 H301 U10 sing 965 n n 
C30 H302 U10 sing 966 n n 
C30 H303 U10 sing 967 n n 
C31 C32 U10 sing 968 n n 
C31 H311 U10 sing 969 n n 
C31 H312 U10 sing 970 n n 
C32 C33 U10 sing 971 n n 
C32 H321 U10 sing 972 n n 
C32 H322 U10 sing 973 n n 
C33 C34 U10 doub 974 e n 
C33 H33 U10 sing 975 n n 
C34 C35 U10 sing 976 n n 
C34 C36 U10 sing 977 n n 
C35 H351 U10 sing 978 n n 
C35 H352 U10 sing 979 n n 
C35 H353 U10 sing 980 n n 
C36 C37 U10 sing 981 n n 
C36 H361 U10 sing 982 n n 
C36 H362 U10 sing 983 n n 
C37 C38 U10 sing 984 n n 
C37 H371 U10 sing 985 n n 
C37 H372 U10 sing 986 n n 
C38 C39 U10 doub 987 e n 
C38 H38 U10 sing 988 n n 
C39 C40 U10 sing 989 n n 
C39 C41 U10 sing 990 n n 
C40 H401 U10 sing 991 n n 
C40 H402 U10 sing 992 n n 
C40 H403 U10 sing 993 n n 
C41 C42 U10 sing 994 n n 
C41 H411 U10 sing 995 n n 
C41 H412 U10 sing 996 n n 
C42 C43 U10 sing 997 n n 
C42 H421 U10 sing 998 n n 
C42 H422 U10 sing 999 n n 
C43 C44 U10 doub 1000 e n 
C43 H43 U10 sing 1001 n n 
C44 C45 U10 sing 1002 n n 
C44 C46 U10 sing 1003 n n 
C45 H451 U10 sing 1004 n n 
C45 H452 U10 sing 1005 n n 
C45 H453 U10 sing 1006 n n 
C46 C47 U10 sing 1007 n n 
C46 H461 U10 sing 1008 n n 
C46 H462 U10 sing 1009 n n 
C47 C48 U10 sing 1010 n n 
C47 H471 U10 sing 1011 n n 
C47 H472 U10 sing 1012 n n 
C48 C49 U10 doub 1013 e n 
C48 H48 U10 sing 1014 n n 
C49 C50 U10 sing 1015 n n 
C49 C51 U10 sing 1016 n n 
C50 H501 U10 sing 1017 n n 
C50 H502 U10 sing 1018 n n 
C50 H503 U10 sing 1019 n n 
C51 C52 U10 sing 1020 n n 
C51 H511 U10 sing 1021 n n 
C51 H512 U10 sing 1022 n n 
C52 C53 U10 sing 1023 n n 
C52 H521 U10 sing 1024 n n 
C52 H522 U10 sing 1025 n n 
C53 C54 U10 doub 1026 n n 
C53 H53 U10 sing 1027 n n 
C54 C55 U10 sing 1028 n n 
C54 C56 U10 sing 1029 n n 
C55 H551 U10 sing 1030 n n 
C55 H552 U10 sing 1031 n n 
C55 H553 U10 sing 1032 n n 
C56 H561 U10 sing 1033 n n 
C56 H562 U10 sing 1034 n n 
C56 H563 U10 sing 1035 n n 
#
_atom_sites.entry_id                     8B64 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
IA 7 BCL a 1 100 100 BCL BCL . 
JA 7 BCL e 1 101 100 BCL BCL . 
KA 7 BCL e 1 102 99 BCL BCL . 
LA 7 BCL D 1 101 99 BCL BCL . 
MA 8 SPO D 1 102 100 SPO SPO . 
NA 7 BCL b 1 101 100 BCL BCL . 
OA 7 BCL b 1 102 99 BCL BCL . 
PA 8 SPO b 1 103 200 SPO SPO . 
QA 8 SPO A 1 201 201 SPO SPO . 
RA 7 BCL A 1 202 99 BCL BCL . 
SA 8 SPO E 1 201 201 SPO SPO . 
TA 8 SPO E 1 202 202 SPO SPO . 
UA 8 SPO E 1 203 202 SPO SPO . 
VA 7 BCL L 1 301 851 BCL BCL . 
WA 9 BPH L 1 302 855 BPH BPH . 
XA 10 U10 L 1 303 901 U10 U10 . 
YA 10 U10 L 1 304 1001 U10 U10 . 
ZA 10 U10 L 1 305 2394 U10 U10 . 
AB 11 3PE L 1 306 304 3PE PEH . 
BB 7 BCL M 1 401 853 BCL BCL . 
CB 12 FE M 1 402 850 FE FE . 
DB 10 U10 M 1 403 850 U10 U10 . 
EB 8 SPO M 1 404 2094 SPO SPO . 
FB 7 BCL M 1 405 2194 BCL BCL . 
GB 11 3PE M 1 406 2494 3PE PEH . 
HB 7 BCL M 1 407 2495 BCL BCL . 
IB 9 BPH M 1 408 2496 BPH BPH . 
JB 11 3PE M 1 409 2497 3PE PEH . 
KB 11 3PE H 1 301 2498 3PE PEH . 
LB 11 3PE H 1 302 303 3PE PEH . 
MB 7 BCL d 1 101 100 BCL BCL . 
NB 8 SPO d 1 102 201 SPO SPO . 
OB 11 3PE d 1 103 301 3PE PEH . 
PB 11 3PE d 1 104 302 3PE PEH . 
QB 8 SPO B 1 101 101 SPO SPO . 
RB 7 BCL t 1 101 100 BCL BCL . 
SB 8 SPO t 1 102 201 SPO SPO . 
TB 8 SPO S 1 201 201 SPO SPO . 
UB 8 SPO S 1 202 202 SPO SPO . 
VB 7 BCL T 1 101 99 BCL BCL . 
WB 7 BCL s 1 101 99 BCL BCL . 
XB 7 BCL s 1 102 100 BCL BCL . 
YB 7 BCL U 1 101 99 BCL BCL . 
ZB 7 BCL U 1 102 100 BCL BCL . 
AC 7 BCL r 1 101 100 BCL BCL . 
BC 8 SPO r 1 102 201 SPO SPO . 
CC 7 BCL r 1 103 99 BCL BCL . 
DC 7 BCL O 1 101 99 BCL BCL . 
EC 8 SPO O 1 102 202 SPO SPO . 
FC 8 SPO R 1 101 202 SPO SPO . 
GC 7 BCL o 1 101 100 BCL BCL . 
HC 8 SPO o 1 102 201 SPO SPO . 
IC 7 BCL n 1 101 100 BCL BCL . 
JC 7 BCL n 1 102 99 BCL BCL . 
KC 8 SPO K 1 101 202 SPO SPO . 
LC 7 BCL K 1 102 99 BCL BCL . 
MC 8 SPO K 1 103 202 SPO SPO . 
NC 8 SPO N 1 201 201 SPO SPO . 
OC 7 BCL k 1 101 100 BCL BCL . 
PC 8 SPO k 1 102 201 SPO SPO . 
QC 7 BCL j 1 101 100 BCL BCL . 
RC 8 SPO j 1 102 201 SPO SPO . 
SC 7 BCL I 1 101 99 BCL BCL . 
TC 8 SPO I 1 102 202 SPO SPO . 
UC 8 SPO J 1 101 202 SPO SPO . 
VC 7 BCL J 1 102 99 BCL BCL . 
WC 7 BCL i 1 101 100 BCL BCL . 
XC 8 SPO i 1 102 201 SPO SPO . 
YC 7 BCL g 1 101 100 BCL BCL . 
ZC 7 BCL g 1 102 99 BCL BCL . 
AD 8 SPO F 1 101 202 SPO SPO . 
BD 7 BCL F 1 102 99 BCL BCL . 
CD 8 SPO G 1 201 201 SPO SPO . 
DD 7 BCL f 1 101 100 BCL BCL . 
ED 8 SPO f 1 102 201 SPO SPO . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 U10 . . . ZA 10 115.832 117.927 144.725 1 8.65 ? C1 U10 305 L 1 
HETATM 2 C C2 U10 . . . ZA 10 114.474 118.497 144.303 1 9.78 ? C2 U10 305 L 1 
HETATM 3 C C3 U10 . . . ZA 10 114.041 119.893 144.768 1 5.82 ? C3 U10 305 L 1 
HETATM 4 C C4 U10 . . . ZA 10 114.977 120.72 145.679 1 13.86 ? C4 U10 305 L 1 
HETATM 5 C C5 U10 . . . ZA 10 116.335 120.142 146.09 1 10.12 ? C5 U10 305 L 1 
HETATM 6 C C6 U10 . . . ZA 10 116.767 118.749 145.619 1 7.93 ? C6 U10 305 L 1 
HETATM 7 C C1M U10 . . . ZA 10 116.259 116.523 144.248 1 5.7 ? C1M U10 305 L 1 
HETATM 8 C C3M U10 . . . ZA 10 112.727 121.031 143.113 1 22.69 ? C3M U10 305 L 1 
HETATM 9 C C4M U10 . . . ZA 10 113.345 122.386 146.428 1 11.87 ? C4M U10 305 L 1 
HETATM 10 C C7 U10 . . . ZA 10 118.143 118.145 146.037 1 9.88 ? C7 U10 305 L 1 
HETATM 11 C C8 U10 . . . ZA 10 119.313 119.094 145.668 1 14.99 ? C8 U10 305 L 1 
HETATM 12 C C9 U10 . . . ZA 10 120.04 119.415 146.749 1 15.16 ? C9 U10 305 L 1 
HETATM 13 C C10 U10 . . . ZA 10 121.206 120.137 147.47 1 22.47 ? C10 U10 305 L 1 
HETATM 14 C C11 U10 . . . ZA 10 120.916 120.273 145.756 1 17.93 ? C11 U10 305 L 1 
HETATM 15 O O2 U10 . . . ZA 10 113.757 117.85 143.61 1 15.19 ? O2 U10 305 L 1 
HETATM 16 O O3 U10 . . . ZA 10 112.768 120.357 144.351 1 23.81 ? O3 U10 305 L 1 
HETATM 17 O O4 U10 . . . ZA 10 114.682 122.025 146.157 1 21.88 ? O4 U10 305 L 1 
HETATM 18 O O5 U10 . . . ZA 10 117.048 120.788 146.782 1 16.43 ? O5 U10 305 L 1 
#
_model_server_stats.io_time_ms              30 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    40 
_model_server_stats.query_time_ms           269 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           18 
#